Protein–RNA interactions for Protein: P39702

VPS8, Vacuolar protein sorting-associated protein 8, yeastyeast

Predictions only

Length 1,274 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
VPS8P39702 IFH1YLR223C 3258 nt1.58□□□□□ -2.16
VPS8P39702 MSN5YDR335W 3675 nt1.57□□□□□ -2.16
VPS8P39702 YOR161W-BYOR161W-B 261 nt1.57□□□□□ -2.16
VPS8P39702 PIK1YNL267W 3201 nt1.57□□□□□ -2.16
VPS8P39702 PET127YOR017W 2403 nt1.57□□□□□ -2.16
VPS8P39702 FIG4YNL325C 2640 nt1.56□□□□□ -2.16
VPS8P39702 YDL206WYDL206W 2289 nt1.56□□□□□ -2.16
VPS8P39702 CLU1YMR012W 3834 nt1.56□□□□□ -2.16
VPS8P39702 AZF1YOR113W 2745 nt1.56□□□□□ -2.16
VPS8P39702 MMS4YBR098W 2076 nt1.56□□□□□ -2.16
VPS8P39702 NUT1YGL151W 3399 nt1.56□□□□□ -2.16
VPS8P39702 YDL196WYDL196W 330 nt1.56□□□□□ -2.16
VPS8P39702 YLR294CYLR294C 330 nt1.56□□□□□ -2.16
VPS8P39702 LAA1YJL207C 6045 nt1.56□□□□□ -2.16
VPS8P39702 POL5YEL055C 3069 nt1.56□□□□□ -2.16
VPS8P39702 YGR130CYGR130C 2451 nt1.55□□□□□ -2.16
VPS8P39702 tH(GUG)E1tH(GUG)E1 72 nt1.55□□□□□ -2.16
VPS8P39702 tH(GUG)E2tH(GUG)E2 72 nt1.55□□□□□ -2.16
VPS8P39702 tH(GUG)G1tH(GUG)G1 72 nt1.55□□□□□ -2.16
VPS8P39702 tH(GUG)G2tH(GUG)G2 72 nt1.55□□□□□ -2.16
VPS8P39702 tH(GUG)HtH(GUG)H 72 nt1.55□□□□□ -2.16
VPS8P39702 tH(GUG)KtH(GUG)K 72 nt1.55□□□□□ -2.16
VPS8P39702 tH(GUG)MtH(GUG)M 72 nt1.55□□□□□ -2.16
VPS8P39702 YLR342W-AYLR342W-A 174 nt1.55□□□□□ -2.16
VPS8P39702 YBR206WYBR206W 324 nt1.55□□□□□ -2.16
VPS8P39702 snR14snR14 160 nt1.54□□□□□ -2.16
VPS8P39702 YOR345CYOR345C 351 nt1.54□□□□□ -2.16
VPS8P39702 snR52snR52 92 nt1.54□□□□□ -2.16
VPS8P39702 CDC25YLR310C 4770 nt1.54□□□□□ -2.16
VPS8P39702 FYV8YGR196C 2454 nt1.54□□□□□ -2.16
VPS8P39702 YJL150WYJL150W 303 nt1.53□□□□□ -2.16
VPS8P39702 YNL338WYNL338W 159 nt1.52□□□□□ -2.17
VPS8P39702 YNL097C-BYNL097C-B 123 nt1.51□□□□□ -2.17
VPS8P39702 MDS3YGL197W 4464 nt1.5□□□□□ -2.17
VPS8P39702 TRS65YGR166W 1683 nt1.49□□□□□ -2.17
VPS8P39702 YDR354C-AYDR354C-A 144 nt1.49□□□□□ -2.17
VPS8P39702 SEC21YNL287W 2808 nt1.49□□□□□ -2.17
VPS8P39702 SEC3YER008C 4011 nt1.48□□□□□ -2.17
VPS8P39702 APL1YJR005W 2103 nt1.48□□□□□ -2.17
VPS8P39702 PRP39YML046W 1890 nt1.48□□□□□ -2.17
VPS8P39702 snR46snR46 197 nt1.47□□□□□ -2.17
VPS8P39702 SWI4YER111C 3282 nt1.47□□□□□ -2.17
VPS8P39702 TRM732YMR259C 4263 nt1.46□□□□□ -2.18
VPS8P39702 ALY2YJL084C 3141 nt1.46□□□□□ -2.18
VPS8P39702 HKR1YDR420W 5409 nt1.45□□□□□ -2.18
VPS8P39702 YEL073CYEL073C 324 nt1.45□□□□□ -2.18
VPS8P39702 RPL33BYOR234C 324 nt1.45□□□□□ -2.18
VPS8P39702 RSM22YKL155C 1887 nt1.45□□□□□ -2.18
VPS8P39702 YAR009CYAR009C 3591 nt1.45□□□□□ -2.18
VPS8P39702 PAN2YGL094C 3348 nt1.44□□□□□ -2.18
VPS8P39702 IML1YJR138W 4755 nt1.43□□□□□ -2.18
VPS8P39702 NUP145YGL092W 3954 nt1.43□□□□□ -2.18
VPS8P39702 APL3YBL037W 3078 nt1.43□□□□□ -2.18
VPS8P39702 PAA1YDR071C 576 nt1.43□□□□□ -2.18
VPS8P39702 YNL211CYNL211C 261 nt1.43□□□□□ -2.18
VPS8P39702 NUP188YML103C 4968 nt1.43□□□□□ -2.18
VPS8P39702 STO1YMR125W 2586 nt1.43□□□□□ -2.18
VPS8P39702 TTI1YKL033W 3117 nt1.42□□□□□ -2.18
VPS8P39702 YJL026C-AYJL026C-A 222 nt1.42□□□□□ -2.18
VPS8P39702 RPS30BYOR182C 192 nt1.42□□□□□ -2.18
VPS8P39702 COY1YKL179C 2040 nt1.41□□□□□ -2.18
VPS8P39702 YLL020CYLL020C 306 nt1.41□□□□□ -2.18
VPS8P39702 EAF1YDR359C 2949 nt1.4□□□□□ -2.18
VPS8P39702 YBR221W-AYBR221W-A 105 nt1.4□□□□□ -2.19
VPS8P39702 WAR1YML076C 2835 nt1.4□□□□□ -2.19
VPS8P39702 GEA2YEL022W 4380 nt1.4□□□□□ -2.19
VPS8P39702 SET3YKR029C 2256 nt1.4□□□□□ -2.19
VPS8P39702 STF2YGR008C 255 nt1.39□□□□□ -2.19
VPS8P39702 tV(UAC)BtV(UAC)B 74 nt1.39□□□□□ -2.19
VPS8P39702 tV(UAC)DtV(UAC)D 74 nt1.39□□□□□ -2.19
VPS8P39702 YAL067W-AYAL067W-A 228 nt1.39□□□□□ -2.19
VPS8P39702 HUG1YML058W-A 207 nt1.39□□□□□ -2.19
VPS8P39702 YNL284C-BYNL284C-B 5268 nt1.38□□□□□ -2.19
VPS8P39702 PMP1YCR024C-A 123 nt1.38□□□□□ -2.19
VPS8P39702 ROM2YLR371W 4071 nt1.38□□□□□ -2.19
VPS8P39702 YCR038W-AYCR038W-A 126 nt1.37□□□□□ -2.19
VPS8P39702 YOR381W-AYOR381W-A 168 nt1.37□□□□□ -2.19
VPS8P39702 YBR200W-AYBR200W-A 165 nt1.36□□□□□ -2.19
VPS8P39702 COX12YLR038C 252 nt1.35□□□□□ -2.19
VPS8P39702 SIP4YJL089W 2490 nt1.35□□□□□ -2.19
VPS8P39702 YKL100W-AYKL100W-A 90 nt1.34□□□□□ -2.19
VPS8P39702 HAL9YOL089C 3093 nt1.34□□□□□ -2.2
VPS8P39702 RAD9YDR217C 3930 nt1.34□□□□□ -2.2
VPS8P39702 UTP8YGR128C 2142 nt1.33□□□□□ -2.2
VPS8P39702 CMC4YMR194C-B 222 nt1.33□□□□□ -2.2
VPS8P39702 CDC39YCR093W 6327 nt1.32□□□□□ -2.2
VPS8P39702 YGL123C-AYGL123C-A 231 nt1.32□□□□□ -2.2
VPS8P39702 YIL002W-AYIL002W-A 210 nt1.32□□□□□ -2.2
VPS8P39702 YIL134C-AYIL134C-A 204 nt1.32□□□□□ -2.2
VPS8P39702 YPR117WYPR117W 7470 nt1.32□□□□□ -2.2
VPS8P39702 YIL020C-AYIL020C-A 339 nt1.31□□□□□ -2.2
VPS8P39702 YPL044CYPL044C 549 nt1.31□□□□□ -2.2
VPS8P39702 DOP1YDR141C 5097 nt1.31□□□□□ -2.2
VPS8P39702 NOP9YJL010C 2001 nt1.3□□□□□ -2.2
VPS8P39702 NST1YNL091W 3723 nt1.3□□□□□ -2.2
VPS8P39702 PRP5YBR237W 2550 nt1.29□□□□□ -2.2
VPS8P39702 RPL26BYGR034W 384 nt1.29□□□□□ -2.2
VPS8P39702 STB6YKL072W 2301 nt1.28□□□□□ -2.2
VPS8P39702 BUD3YCL014W 4911 nt1.27□□□□□ -2.21
VPS8P39702 YHL015W-AYHL015W-A 84 nt1.27□□□□□ -2.21
Retrieved 100 of 7,029 protein–RNA pairs in 13.9 ms