Protein–RNA interactions for Protein: P38848

PEX28, Peroxisomal membrane protein PEX28, yeastyeast

Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
PEX28P38848 ATG9YDL149W 2994 nt2.09□□□□□ -2.07
PEX28P38848 YER172C-AYER172C-A 381 nt2.09□□□□□ -2.07
PEX28P38848 UFD2YDL190C 2886 nt2.09□□□□□ -2.08
PEX28P38848 MYO4YAL029C 4416 nt2.08□□□□□ -2.08
PEX28P38848 INO80YGL150C 4470 nt2.07□□□□□ -2.08
PEX28P38848 RAD50YNL250W 3939 nt2.07□□□□□ -2.08
PEX28P38848 YLL054CYLL054C 2532 nt2.06□□□□□ -2.08
PEX28P38848 YIL071W-AYIL071W-A 477 nt2.06□□□□□ -2.08
PEX28P38848 PDR8YLR266C 2106 nt2.06□□□□□ -2.08
PEX28P38848 SEC31YDL195W 3822 nt2.06□□□□□ -2.08
PEX28P38848 MMS4YBR098W 2076 nt2.05□□□□□ -2.08
PEX28P38848 BRE1YDL074C 2103 nt2.05□□□□□ -2.08
PEX28P38848 LHS1YKL073W 2646 nt2.05□□□□□ -2.08
PEX28P38848 RSM22YKL155C 1887 nt2.05□□□□□ -2.08
PEX28P38848 UBR2YLR024C 5619 nt2.04□□□□□ -2.08
PEX28P38848 YDR544CYDR544C 429 nt2.04□□□□□ -2.08
PEX28P38848 YGL123C-AYGL123C-A 231 nt2.04□□□□□ -2.08
PEX28P38848 YBR099CYBR099C 384 nt2.04□□□□□ -2.08
PEX28P38848 HSL1YKL101W 4557 nt2.04□□□□□ -2.08
PEX28P38848 CHS6YJL099W 2241 nt2.03□□□□□ -2.08
PEX28P38848 YGL182CYGL182C 324 nt2.03□□□□□ -2.08
PEX28P38848 YKL100W-AYKL100W-A 90 nt2.03□□□□□ -2.08
PEX28P38848 CMC4YMR194C-B 222 nt2.03□□□□□ -2.08
PEX28P38848 YCS4YLR272C 3531 nt2.03□□□□□ -2.08
PEX28P38848 UTP8YGR128C 2142 nt2.02□□□□□ -2.09
PEX28P38848 YCR095W-AYCR095W-A 159 nt2.02□□□□□ -2.09
PEX28P38848 OST4YDL232W 111 nt2.02□□□□□ -2.09
PEX28P38848 YLL020CYLL020C 306 nt2.02□□□□□ -2.09
PEX28P38848 FAB1YFR019W 6837 nt2.02□□□□□ -2.09
PEX28P38848 MGA2YIR033W 3342 nt2.01□□□□□ -2.09
PEX28P38848 TFB5YDR079C-A 219 nt2.01□□□□□ -2.09
PEX28P38848 YLR282CYLR282C 342 nt2.01□□□□□ -2.09
PEX28P38848 COA6YMR244C-A 315 nt2.01□□□□□ -2.09
PEX28P38848 BFR2YDR299W 1605 nt2.01□□□□□ -2.09
PEX28P38848 SKI3YPR189W 4299 nt2.01□□□□□ -2.09
PEX28P38848 TBS1YBR150C 3285 nt2□□□□□ -2.09
PEX28P38848 IRC8YJL051W 2469 nt2□□□□□ -2.09
PEX28P38848 KCS1YDR017C 3153 nt2□□□□□ -2.09
PEX28P38848 YMR326CYMR326C 309 nt2□□□□□ -2.09
PEX28P38848 PMP2YEL017C-A 132 nt1.99□□□□□ -2.09
PEX28P38848 SLX4YLR135W 2247 nt1.99□□□□□ -2.09
PEX28P38848 YAR009CYAR009C 3591 nt1.99□□□□□ -2.09
PEX28P38848 DNF1YER166W 4716 nt1.98□□□□□ -2.09
PEX28P38848 UFD4YKL010C 4452 nt1.98□□□□□ -2.09
PEX28P38848 COX5BYIL111W 456 nt1.98□□□□□ -2.09
PEX28P38848 PEP1YBL017C 4740 nt1.97□□□□□ -2.09
PEX28P38848 YLR422WYLR422W 5799 nt1.96□□□□□ -2.09
PEX28P38848 IRC20YLR247C 4671 nt1.96□□□□□ -2.1
PEX28P38848 YOR093CYOR093C 4947 nt1.96□□□□□ -2.1
PEX28P38848 YOR161W-AYOR161W-A 81 nt1.95□□□□□ -2.1
PEX28P38848 SMC1YFL008W 3678 nt1.94□□□□□ -2.1
PEX28P38848 SMC4YLR086W 4257 nt1.94□□□□□ -2.1
PEX28P38848 SOM1YEL059C-A 225 nt1.94□□□□□ -2.1
PEX28P38848 YBL039C-AYBL039C-A 84 nt1.94□□□□□ -2.1
PEX28P38848 YNL103W-AYNL103W-A 90 nt1.94□□□□□ -2.1
PEX28P38848 SPP41YDR464W 4308 nt1.94□□□□□ -2.1
PEX28P38848 UBP2YOR124C 3819 nt1.94□□□□□ -2.1
PEX28P38848 YHR214C-BYHR214C-B 5382 nt1.94□□□□□ -2.1
PEX28P38848 NEO1YIL048W 3456 nt1.93□□□□□ -2.1
PEX28P38848 snR14snR14 160 nt1.93□□□□□ -2.1
PEX28P38848 EAF1YDR359C 2949 nt1.93□□□□□ -2.1
PEX28P38848 MYO2YOR326W 4725 nt1.93□□□□□ -2.1
PEX28P38848 STB6YKL072W 2301 nt1.92□□□□□ -2.1
PEX28P38848 NUP192YJL039C 5052 nt1.92□□□□□ -2.1
PEX28P38848 TMA7YLR262C-A 195 nt1.92□□□□□ -2.1
PEX28P38848 YMR272W-BYMR272W-B 108 nt1.92□□□□□ -2.1
PEX28P38848 YNL067W-BYNL067W-B 141 nt1.92□□□□□ -2.1
PEX28P38848 YLR419WYLR419W 4308 nt1.92□□□□□ -2.1
PEX28P38848 snR61snR61 90 nt1.91□□□□□ -2.1
PEX28P38848 FKS1YLR342W 5631 nt1.91□□□□□ -2.1
PEX28P38848 KAP122YGL016W 3246 nt1.9□□□□□ -2.11
PEX28P38848 YHR217CYHR217C 462 nt1.9□□□□□ -2.11
PEX28P38848 DGR1YNL130C-A 147 nt1.9□□□□□ -2.11
PEX28P38848 YML002WYML002W 2214 nt1.9□□□□□ -2.11
PEX28P38848 TAH1YCR060W 336 nt1.89□□□□□ -2.11
PEX28P38848 SAC3YDR159W 3906 nt1.88□□□□□ -2.11
PEX28P38848 QCR9YGR183C 201 nt1.88□□□□□ -2.11
PEX28P38848 NOP9YJL010C 2001 nt1.88□□□□□ -2.11
PEX28P38848 SET3YKR029C 2256 nt1.86□□□□□ -2.11
PEX28P38848 STF2YGR008C 255 nt1.86□□□□□ -2.11
PEX28P38848 STO1YMR125W 2586 nt1.86□□□□□ -2.11
PEX28P38848 YMR045CYMR045C 5268 nt1.85□□□□□ -2.11
PEX28P38848 RTP1YMR185W 2946 nt1.85□□□□□ -2.11
PEX28P38848 DNF3YMR162C 4971 nt1.85□□□□□ -2.11
PEX28P38848 BPH1YCR032W 6504 nt1.84□□□□□ -2.11
PEX28P38848 ROM2YLR371W 4071 nt1.83□□□□□ -2.12
PEX28P38848 YLR041WYLR041W 321 nt1.83□□□□□ -2.12
PEX28P38848 CDC25YLR310C 4770 nt1.83□□□□□ -2.12
PEX28P38848 MON2YNL297C 4911 nt1.81□□□□□ -2.12
PEX28P38848 WAR1YML076C 2835 nt1.81□□□□□ -2.12
PEX28P38848 SBH1YER087C-B 249 nt1.81□□□□□ -2.12
PEX28P38848 RPL26BYGR034W 384 nt1.81□□□□□ -2.12
PEX28P38848 snR39BsnR39B 96 nt1.81□□□□□ -2.12
PEX28P38848 SEC21YNL287W 2808 nt1.81□□□□□ -2.12
PEX28P38848 SWI4YER111C 3282 nt1.81□□□□□ -2.12
PEX28P38848 tM(CAU)Q2tM(CAU)Q2 78 nt1.8□□□□□ -2.12
PEX28P38848 HUG1YML058W-A 207 nt1.8□□□□□ -2.12
PEX28P38848 FYV10YIL097W 1551 nt1.8□□□□□ -2.12
PEX28P38848 PMD1YER132C 5262 nt1.8□□□□□ -2.12
PEX28P38848 YDL247W-AYDL247W-A 75 nt1.79□□□□□ -2.12
Retrieved 100 of 7,029 protein–RNA pairs in 28.9 ms