Protein–RNA interactions for Protein: P38351

PAF1, RNA polymerase II-associated protein 1, yeastyeast

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
PAF1P38351 YJL197C-AYJL197C-A 282 nt1.49□□□□□ -2.17
PAF1P38351 YLR120W-AYLR120W-A 102 nt1.49□□□□□ -2.17
PAF1P38351 YOR282WYOR282W 321 nt1.49□□□□□ -2.17
PAF1P38351 RSM22YKL155C 1887 nt1.48□□□□□ -2.17
PAF1P38351 YPL152W-AYPL152W-A 99 nt1.48□□□□□ -2.17
PAF1P38351 EAF1YDR359C 2949 nt1.48□□□□□ -2.17
PAF1P38351 CLU1YMR012W 3834 nt1.47□□□□□ -2.17
PAF1P38351 YGL052WYGL052W 306 nt1.47□□□□□ -2.17
PAF1P38351 YOR015WYOR015W 360 nt1.47□□□□□ -2.17
PAF1P38351 OLI1Q0130 231 nt1.46□□□□□ -2.18
PAF1P38351 SGF11YPL047W 300 nt1.46□□□□□ -2.18
PAF1P38351 STB6YKL072W 2301 nt1.45□□□□□ -2.18
PAF1P38351 YMR172C-AYMR172C-A 384 nt1.45□□□□□ -2.18
PAF1P38351 YPR092WYPR092W 306 nt1.44□□□□□ -2.18
PAF1P38351 CDC39YCR093W 6327 nt1.43□□□□□ -2.18
PAF1P38351 YHR063W-AYHR063W-A 336 nt1.43□□□□□ -2.18
PAF1P38351 snR49snR49 165 nt1.43□□□□□ -2.18
PAF1P38351 ROM2YLR371W 4071 nt1.42□□□□□ -2.18
PAF1P38351 UBP3YER151C 2739 nt1.41□□□□□ -2.18
PAF1P38351 RAD9YDR217C 3930 nt1.4□□□□□ -2.18
PAF1P38351 RPS30BYOR182C 192 nt1.4□□□□□ -2.19
PAF1P38351 NUP157YER105C 4176 nt1.39□□□□□ -2.19
PAF1P38351 YOR072W-BYOR072W-B 162 nt1.39□□□□□ -2.19
PAF1P38351 snR55snR55 98 nt1.38□□□□□ -2.19
PAF1P38351 PAM16YJL104W 450 nt1.37□□□□□ -2.19
PAF1P38351 YMR307C-AYMR307C-A 195 nt1.37□□□□□ -2.19
PAF1P38351 YNL211CYNL211C 261 nt1.37□□□□□ -2.19
PAF1P38351 YNL284C-BYNL284C-B 5268 nt1.37□□□□□ -2.19
PAF1P38351 PAA1YDR071C 576 nt1.36□□□□□ -2.19
PAF1P38351 YDR354C-AYDR354C-A 144 nt1.36□□□□□ -2.19
PAF1P38351 YGL188C-AYGL188C-A 141 nt1.36□□□□□ -2.19
PAF1P38351 CMC4YMR194C-B 222 nt1.36□□□□□ -2.19
PAF1P38351 YLL019W-AYLL019W-A 93 nt1.35□□□□□ -2.19
PAF1P38351 NOP9YJL010C 2001 nt1.34□□□□□ -2.19
PAF1P38351 YOL155W-AYOL155W-A 135 nt1.34□□□□□ -2.19
PAF1P38351 YPL044CYPL044C 549 nt1.34□□□□□ -2.19
PAF1P38351 APL1YJR005W 2103 nt1.33□□□□□ -2.2
PAF1P38351 snR74snR74 88 nt1.33□□□□□ -2.2
PAF1P38351 snR8snR8 190 nt1.33□□□□□ -2.2
PAF1P38351 VAM6YDL077C 3150 nt1.33□□□□□ -2.2
PAF1P38351 NST1YNL091W 3723 nt1.32□□□□□ -2.2
PAF1P38351 ISD11YER048W-A 285 nt1.31□□□□□ -2.2
PAF1P38351 YGL041CYGL041C 204 nt1.29□□□□□ -2.2
PAF1P38351 YPR117WYPR117W 7470 nt1.28□□□□□ -2.2
PAF1P38351 YAL067W-AYAL067W-A 228 nt1.28□□□□□ -2.2
PAF1P38351 ABF2YMR072W 552 nt1.28□□□□□ -2.2
PAF1P38351 SCC2YDR180W 4482 nt1.28□□□□□ -2.21
PAF1P38351 YDL196WYDL196W 330 nt1.27□□□□□ -2.21
PAF1P38351 tF(GAA)QtF(GAA)Q 75 nt1.27□□□□□ -2.21
PAF1P38351 RPL26BYGR034W 384 nt1.27□□□□□ -2.21
PAF1P38351 YJL026C-AYJL026C-A 222 nt1.27□□□□□ -2.21
PAF1P38351 BEM2YER155C 6504 nt1.27□□□□□ -2.21
PAF1P38351 DOP1YDR141C 5097 nt1.25□□□□□ -2.21
PAF1P38351 YCR018C-AYCR018C-A 255 nt1.25□□□□□ -2.21
PAF1P38351 YBR182C-AYBR182C-A 195 nt1.25□□□□□ -2.21
PAF1P38351 YIL142C-AYIL142C-A 333 nt1.24□□□□□ -2.21
PAF1P38351 YKU70YMR284W 1809 nt1.24□□□□□ -2.21
PAF1P38351 YDR366CYDR366C 399 nt1.23□□□□□ -2.21
PAF1P38351 YIR030W-AYIR030W-A 384 nt1.23□□□□□ -2.21
PAF1P38351 PAU24YBR301W 363 nt1.23□□□□□ -2.21
PAF1P38351 YFR012W-AYFR012W-A 87 nt1.22□□□□□ -2.21
PAF1P38351 BFR2YDR299W 1605 nt1.2□□□□□ -2.22
PAF1P38351 snR80snR80 171 nt1.2□□□□□ -2.22
PAF1P38351 YJR029WYJR029W 5268 nt1.2□□□□□ -2.22
PAF1P38351 YPR137C-BYPR137C-B 5268 nt1.2□□□□□ -2.22
PAF1P38351 YDL185C-AYDL185C-A 228 nt1.19□□□□□ -2.22
PAF1P38351 UTP20YBL004W 7482 nt1.18□□□□□ -2.22
PAF1P38351 NPR2YEL062W 1848 nt1.18□□□□□ -2.22
PAF1P38351 PAU12YGR294W 363 nt1.18□□□□□ -2.22
PAF1P38351 KAP120YPL125W 3099 nt1.18□□□□□ -2.22
PAF1P38351 COY1YKL179C 2040 nt1.18□□□□□ -2.22
PAF1P38351 PMP1YCR024C-A 123 nt1.17□□□□□ -2.22
PAF1P38351 snR190snR190 190 nt1.16□□□□□ -2.22
PAF1P38351 tF(GAA)BtF(GAA)B 73 nt1.15□□□□□ -2.23
PAF1P38351 tF(GAA)FtF(GAA)F 73 nt1.15□□□□□ -2.23
PAF1P38351 tF(GAA)GtF(GAA)G 73 nt1.15□□□□□ -2.23
PAF1P38351 tF(GAA)H1tF(GAA)H1 73 nt1.15□□□□□ -2.23
PAF1P38351 tF(GAA)H2tF(GAA)H2 73 nt1.15□□□□□ -2.23
PAF1P38351 tF(GAA)MtF(GAA)M 73 nt1.15□□□□□ -2.23
PAF1P38351 tF(GAA)P1tF(GAA)P1 73 nt1.15□□□□□ -2.23
PAF1P38351 tF(GAA)P2tF(GAA)P2 73 nt1.15□□□□□ -2.23
PAF1P38351 YGL123C-AYGL123C-A 231 nt1.15□□□□□ -2.23
PAF1P38351 ULI1YFR026C 510 nt1.14□□□□□ -2.23
PAF1P38351 YLR282CYLR282C 342 nt1.14□□□□□ -2.23
PAF1P38351 ASE1YOR058C 2658 nt1.13□□□□□ -2.23
PAF1P38351 SEC8YPR055W 3198 nt1.13□□□□□ -2.23
PAF1P38351 BLI1YKL061W 342 nt1.13□□□□□ -2.23
PAF1P38351 YOR345CYOR345C 351 nt1.13□□□□□ -2.23
PAF1P38351 YKL100W-AYKL100W-A 90 nt1.12□□□□□ -2.23
PAF1P38351 QCR9YGR183C 201 nt1.11□□□□□ -2.23
PAF1P38351 BUD3YCL014W 4911 nt1.1□□□□□ -2.23
PAF1P38351 COX12YLR038C 252 nt1.1□□□□□ -2.23
PAF1P38351 YOR161W-AYOR161W-A 81 nt1.1□□□□□ -2.23
PAF1P38351 YOR302WYOR302W 78 nt1.1□□□□□ -2.23
PAF1P38351 YMR160WYMR160W 2451 nt1.09□□□□□ -2.23
PAF1P38351 COX5BYIL111W 456 nt1.09□□□□□ -2.23
PAF1P38351 YMR158W-BYMR158W-B 321 nt1.09□□□□□ -2.23
PAF1P38351 YML002WYML002W 2214 nt1.09□□□□□ -2.24
PAF1P38351 RKR1YMR247C 4689 nt1.09□□□□□ -2.24
PAF1P38351 PRP16YKR086W 3216 nt1.08□□□□□ -2.24
Retrieved 100 of 7,029 protein–RNA pairs in 51.1 ms