Protein–RNA interactions for Protein: P34228

SEF1, Putative transcription factor SEF1, yeastyeast

Predictions only

Length 1,148 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SEF1P34228 YBR200W-AYBR200W-A 165 nt1.24□□□□□ -2.21
SEF1P34228 AHC1YOR023C 1701 nt1.23□□□□□ -2.21
SEF1P34228 IML1YJR138W 4755 nt1.23□□□□□ -2.21
SEF1P34228 RPS27BYHR021C 249 nt1.23□□□□□ -2.21
SEF1P34228 YNL028WYNL028W 318 nt1.23□□□□□ -2.21
SEF1P34228 TTI1YKL033W 3117 nt1.22□□□□□ -2.21
SEF1P34228 CDC25YLR310C 4770 nt1.22□□□□□ -2.21
SEF1P34228 CDC36YDL165W 576 nt1.22□□□□□ -2.21
SEF1P34228 YGL052WYGL052W 306 nt1.22□□□□□ -2.21
SEF1P34228 YJL197C-AYJL197C-A 282 nt1.22□□□□□ -2.21
SEF1P34228 ABF2YMR072W 552 nt1.22□□□□□ -2.21
SEF1P34228 YOR011W-AYOR011W-A 207 nt1.22□□□□□ -2.21
SEF1P34228 NUP157YER105C 4176 nt1.21□□□□□ -2.22
SEF1P34228 NPR2YEL062W 1848 nt1.21□□□□□ -2.22
SEF1P34228 RAD9YDR217C 3930 nt1.2□□□□□ -2.22
SEF1P34228 BUD3YCL014W 4911 nt1.2□□□□□ -2.22
SEF1P34228 tF(GAA)QtF(GAA)Q 75 nt1.2□□□□□ -2.22
SEF1P34228 WAR1YML076C 2835 nt1.19□□□□□ -2.22
SEF1P34228 SPG3YDR504C 384 nt1.19□□□□□ -2.22
SEF1P34228 IES4YOR189W 351 nt1.19□□□□□ -2.22
SEF1P34228 YOR218CYOR218C 420 nt1.19□□□□□ -2.22
SEF1P34228 YIL020C-AYIL020C-A 339 nt1.18□□□□□ -2.22
SEF1P34228 JLP2YMR132C 627 nt1.18□□□□□ -2.22
SEF1P34228 YOL155W-AYOL155W-A 135 nt1.18□□□□□ -2.22
SEF1P34228 snR74snR74 88 nt1.17□□□□□ -2.22
SEF1P34228 RPS30BYOR182C 192 nt1.17□□□□□ -2.22
SEF1P34228 YOR302WYOR302W 78 nt1.17□□□□□ -2.22
SEF1P34228 YMR307C-AYMR307C-A 195 nt1.16□□□□□ -2.22
SEF1P34228 NST1YNL091W 3723 nt1.16□□□□□ -2.22
SEF1P34228 snR55snR55 98 nt1.15□□□□□ -2.23
SEF1P34228 YPR092WYPR092W 306 nt1.15□□□□□ -2.23
SEF1P34228 OLI1Q0130 231 nt1.14□□□□□ -2.23
SEF1P34228 ECM12YHR021W-A 456 nt1.14□□□□□ -2.23
SEF1P34228 APQ12YIL040W 417 nt1.14□□□□□ -2.23
SEF1P34228 SGF11YPL047W 300 nt1.14□□□□□ -2.23
SEF1P34228 PRP16YKR086W 3216 nt1.14□□□□□ -2.23
SEF1P34228 KAP120YPL125W 3099 nt1.14□□□□□ -2.23
SEF1P34228 tV(UAC)BtV(UAC)B 74 nt1.12□□□□□ -2.23
SEF1P34228 tV(UAC)DtV(UAC)D 74 nt1.12□□□□□ -2.23
SEF1P34228 YIR030W-AYIR030W-A 384 nt1.11□□□□□ -2.23
SEF1P34228 RPL33BYOR234C 324 nt1.11□□□□□ -2.23
SEF1P34228 MCM10YIL150C 1716 nt1.11□□□□□ -2.23
SEF1P34228 tM(CAU)Q1tM(CAU)Q1 76 nt1.1□□□□□ -2.23
SEF1P34228 QCR9YGR183C 201 nt1.1□□□□□ -2.23
SEF1P34228 PAM16YJL104W 450 nt1.1□□□□□ -2.23
SEF1P34228 BLI1YKL061W 342 nt1.1□□□□□ -2.23
SEF1P34228 SIP4YJL089W 2490 nt1.09□□□□□ -2.23
SEF1P34228 YNL097C-BYNL097C-B 123 nt1.09□□□□□ -2.23
SEF1P34228 GEA2YEL022W 4380 nt1.08□□□□□ -2.24
SEF1P34228 NOP9YJL010C 2001 nt1.08□□□□□ -2.24
SEF1P34228 SMC1YFL008W 3678 nt1.08□□□□□ -2.24
SEF1P34228 YMR046W-AYMR046W-A 129 nt1.08□□□□□ -2.24
SEF1P34228 CMC4YMR194C-B 222 nt1.08□□□□□ -2.24
SEF1P34228 YNL211CYNL211C 261 nt1.08□□□□□ -2.24
SEF1P34228 APL1YJR005W 2103 nt1.07□□□□□ -2.24
SEF1P34228 YDL073WYDL073W 2955 nt1.07□□□□□ -2.24
SEF1P34228 ISD11YER048W-A 285 nt1.07□□□□□ -2.24
SEF1P34228 YBR182C-AYBR182C-A 195 nt1.07□□□□□ -2.24
SEF1P34228 VAM6YDL077C 3150 nt1.06□□□□□ -2.24
SEF1P34228 YDR354C-AYDR354C-A 144 nt1.06□□□□□ -2.24
SEF1P34228 YKU70YMR284W 1809 nt1.05□□□□□ -2.24
SEF1P34228 YDL196WYDL196W 330 nt1.05□□□□□ -2.24
SEF1P34228 PAA1YDR071C 576 nt1.05□□□□□ -2.24
SEF1P34228 YJL026C-AYJL026C-A 222 nt1.05□□□□□ -2.24
SEF1P34228 YLL019W-AYLL019W-A 93 nt1.04□□□□□ -2.24
SEF1P34228 YPL044CYPL044C 549 nt1.04□□□□□ -2.24
SEF1P34228 ASE1YOR058C 2658 nt1.04□□□□□ -2.24
SEF1P34228 SPT7YBR081C 3999 nt1.03□□□□□ -2.24
SEF1P34228 YCR018C-AYCR018C-A 255 nt1.03□□□□□ -2.24
SEF1P34228 tF(GAA)BtF(GAA)B 73 nt1.03□□□□□ -2.24
SEF1P34228 tF(GAA)FtF(GAA)F 73 nt1.03□□□□□ -2.24
SEF1P34228 tF(GAA)GtF(GAA)G 73 nt1.03□□□□□ -2.24
SEF1P34228 tF(GAA)H1tF(GAA)H1 73 nt1.03□□□□□ -2.24
SEF1P34228 tF(GAA)H2tF(GAA)H2 73 nt1.03□□□□□ -2.24
SEF1P34228 YDR406W-AYDR406W-A 246 nt1.03□□□□□ -2.24
SEF1P34228 tF(GAA)MtF(GAA)M 73 nt1.03□□□□□ -2.24
SEF1P34228 tF(GAA)P1tF(GAA)P1 73 nt1.03□□□□□ -2.24
SEF1P34228 tF(GAA)P2tF(GAA)P2 73 nt1.03□□□□□ -2.24
SEF1P34228 YAL067W-AYAL067W-A 228 nt1.03□□□□□ -2.24
SEF1P34228 YBR131C-AYBR131C-A 90 nt1.03□□□□□ -2.24
SEF1P34228 SCC2YDR180W 4482 nt1.03□□□□□ -2.25
SEF1P34228 YOR072W-BYOR072W-B 162 nt1.01□□□□□ -2.25
SEF1P34228 BEM2YER155C 6504 nt1□□□□□ -2.25
SEF1P34228 YNL337WYNL337W 255 nt1□□□□□ -2.25
SEF1P34228 YOR225WYOR225W 330 nt1□□□□□ -2.25
SEF1P34228 YOR345CYOR345C 351 nt1□□□□□ -2.25
SEF1P34228 YDL185C-AYDL185C-A 228 nt0.99□□□□□ -2.25
SEF1P34228 YFR012W-AYFR012W-A 87 nt0.99□□□□□ -2.25
SEF1P34228 RPL26BYGR034W 384 nt0.99□□□□□ -2.25
SEF1P34228 YIL134C-AYIL134C-A 204 nt0.99□□□□□ -2.25
SEF1P34228 DOP1YDR141C 5097 nt0.99□□□□□ -2.25
SEF1P34228 HAL9YOL089C 3093 nt0.98□□□□□ -2.25
SEF1P34228 BFR2YDR299W 1605 nt0.98□□□□□ -2.25
SEF1P34228 PMP1YCR024C-A 123 nt0.98□□□□□ -2.25
SEF1P34228 YJR029WYJR029W 5268 nt0.97□□□□□ -2.25
SEF1P34228 YPR137C-BYPR137C-B 5268 nt0.97□□□□□ -2.25
SEF1P34228 YNL198CYNL198C 303 nt0.97□□□□□ -2.25
SEF1P34228 snR46snR46 197 nt0.97□□□□□ -2.25
SEF1P34228 UBP3YER151C 2739 nt0.96□□□□□ -2.26
SEF1P34228 EMT1tM(CAU)D 73 nt0.96□□□□□ -2.26
Retrieved 100 of 7,029 protein–RNA pairs in 22.6 ms