Protein–RNA interactions for Protein: P31412

VMA5, V-type proton ATPase subunit C, yeastyeast

Known RBP Predictions only

Length 392 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
VMA5P31412 tT(AGU)I1tT(AGU)I1 73 nt0.56□□□□□ -2.32
VMA5P31412 tT(AGU)I2tT(AGU)I2 73 nt0.56□□□□□ -2.32
VMA5P31412 tT(AGU)JtT(AGU)J 73 nt0.56□□□□□ -2.32
VMA5P31412 tT(AGU)N1tT(AGU)N1 73 nt0.56□□□□□ -2.32
VMA5P31412 tT(AGU)N2tT(AGU)N2 73 nt0.56□□□□□ -2.32
VMA5P31412 tT(AGU)O1tT(AGU)O1 73 nt0.56□□□□□ -2.32
VMA5P31412 tT(AGU)O2tT(AGU)O2 73 nt0.56□□□□□ -2.32
VMA5P31412 FYV10YIL097W 1551 nt0.56□□□□□ -2.32
VMA5P31412 YFL019CYFL019C 354 nt0.55□□□□□ -2.32
VMA5P31412 YHL046W-AYHL046W-A 327 nt0.55□□□□□ -2.32
VMA5P31412 YIL115W-AYIL115W-A 372 nt0.55□□□□□ -2.32
VMA5P31412 YMR321CYMR321C 318 nt0.55□□□□□ -2.32
VMA5P31412 YOR218CYOR218C 420 nt0.55□□□□□ -2.32
VMA5P31412 YPR160W-AYPR160W-A 81 nt0.55□□□□□ -2.32
VMA5P31412 UTP10YJL109C 5310 nt0.54□□□□□ -2.32
VMA5P31412 YDR048CYDR048C 315 nt0.54□□□□□ -2.32
VMA5P31412 YDL185C-AYDL185C-A 228 nt0.53□□□□□ -2.32
VMA5P31412 YIL142C-AYIL142C-A 333 nt0.53□□□□□ -2.32
VMA5P31412 YPR016W-AYPR016W-A 261 nt0.53□□□□□ -2.32
VMA5P31412 COG8YML071C 1824 nt0.52□□□□□ -2.33
VMA5P31412 SEC8YPR055W 3198 nt0.52□□□□□ -2.33
VMA5P31412 YIL134C-AYIL134C-A 204 nt0.51□□□□□ -2.33
VMA5P31412 PRP5YBR237W 2550 nt0.51□□□□□ -2.33
VMA5P31412 INA22YIR024C 651 nt0.5□□□□□ -2.33
VMA5P31412 YJL127W-AYJL127W-A 117 nt0.5□□□□□ -2.33
VMA5P31412 HAL9YOL089C 3093 nt0.5□□□□□ -2.33
VMA5P31412 YAL067W-AYAL067W-A 228 nt0.49□□□□□ -2.33
VMA5P31412 YLR399W-AYLR399W-A 105 nt0.49□□□□□ -2.33
VMA5P31412 YSP1YHR155W 3687 nt0.49□□□□□ -2.33
VMA5P31412 OST4YDL232W 111 nt0.47□□□□□ -2.33
VMA5P31412 BEM3YPL115C 3387 nt0.46□□□□□ -2.34
VMA5P31412 YDR354C-AYDR354C-A 144 nt0.46□□□□□ -2.34
VMA5P31412 RPS27BYHR021C 249 nt0.46□□□□□ -2.34
VMA5P31412 YJL026C-AYJL026C-A 222 nt0.46□□□□□ -2.34
VMA5P31412 YAF9YNL107W 681 nt0.46□□□□□ -2.34
VMA5P31412 YPR012WYPR012W 255 nt0.46□□□□□ -2.34
VMA5P31412 YDR102CYDR102C 333 nt0.45□□□□□ -2.34
VMA5P31412 COX5BYIL111W 456 nt0.45□□□□□ -2.34
VMA5P31412 snR190snR190 190 nt0.45□□□□□ -2.34
VMA5P31412 YPR170W-AYPR170W-A 186 nt0.44□□□□□ -2.34
VMA5P31412 PRP42YDR235W 1635 nt0.43□□□□□ -2.34
VMA5P31412 YCR018C-AYCR018C-A 255 nt0.43□□□□□ -2.34
VMA5P31412 HTL1YCR020W-B 237 nt0.43□□□□□ -2.34
VMA5P31412 YMR307C-AYMR307C-A 195 nt0.43□□□□□ -2.34
VMA5P31412 PAU12YGR294W 363 nt0.42□□□□□ -2.34
VMA5P31412 YOR345CYOR345C 351 nt0.42□□□□□ -2.34
VMA5P31412 VIK1YPL253C 1944 nt0.42□□□□□ -2.34
VMA5P31412 PET111YMR257C 2403 nt0.42□□□□□ -2.34
VMA5P31412 SBH1YER087C-B 249 nt0.41□□□□□ -2.34
VMA5P31412 YOR029WYOR029W 336 nt0.41□□□□□ -2.34
VMA5P31412 snR60snR60 104 nt0.39□□□□□ -2.35
VMA5P31412 tN(GUU)QtN(GUU)Q 71 nt0.39□□□□□ -2.35
VMA5P31412 YMR160WYMR160W 2451 nt0.39□□□□□ -2.35
VMA5P31412 ABF2YMR072W 552 nt0.38□□□□□ -2.35
VMA5P31412 CSE2YNR010W 450 nt0.38□□□□□ -2.35
VMA5P31412 YIL032CYIL032C 357 nt0.37□□□□□ -2.35
VMA5P31412 YPR197CYPR197C 564 nt0.37□□□□□ -2.35
VMA5P31412 YCR022CYCR022C 345 nt0.36□□□□□ -2.35
VMA5P31412 YDR183C-AYDR183C-A 258 nt0.36□□□□□ -2.35
VMA5P31412 YKL136WYKL136W 399 nt0.36□□□□□ -2.35
VMA5P31412 YLR282CYLR282C 342 nt0.36□□□□□ -2.35
VMA5P31412 YOR192C-BYOR192C-B 5313 nt0.36□□□□□ -2.35
VMA5P31412 YEL020C-BYEL020C-B 198 nt0.35□□□□□ -2.35
VMA5P31412 ULI1YFR026C 510 nt0.35□□□□□ -2.35
VMA5P31412 YPL038W-AYPL038W-A 192 nt0.35□□□□□ -2.35
VMA5P31412 COY1YKL179C 2040 nt0.34□□□□□ -2.36
VMA5P31412 YPR092WYPR092W 306 nt0.34□□□□□ -2.36
VMA5P31412 MLP1YKR095W 5628 nt0.34□□□□□ -2.36
VMA5P31412 YJL197C-AYJL197C-A 282 nt0.33□□□□□ -2.36
VMA5P31412 YMR193C-AYMR193C-A 387 nt0.32□□□□□ -2.36
VMA5P31412 IQG1YPL242C 4488 nt0.32□□□□□ -2.36
VMA5P31412 YFL063WYFL063W 456 nt0.31□□□□□ -2.36
VMA5P31412 YOR161W-AYOR161W-A 81 nt0.31□□□□□ -2.36
VMA5P31412 snR36snR36 182 nt0.31□□□□□ -2.36
VMA5P31412 ATP6Q0085 780 nt0.3□□□□□ -2.36
VMA5P31412 RPS30BYOR182C 192 nt0.3□□□□□ -2.36
VMA5P31412 NNF2YGR089W 2811 nt0.29□□□□□ -2.36
VMA5P31412 YDL240C-AYDL240C-A 138 nt0.29□□□□□ -2.36
VMA5P31412 YLL019W-AYLL019W-A 93 nt0.29□□□□□ -2.36
VMA5P31412 YLR041WYLR041W 321 nt0.29□□□□□ -2.36
VMA5P31412 YOR015WYOR015W 360 nt0.29□□□□□ -2.36
VMA5P31412 UTP20YBL004W 7482 nt0.28□□□□□ -2.36
VMA5P31412 ESP1YGR098C 4893 nt0.27□□□□□ -2.37
VMA5P31412 YDR371C-AYDR371C-A 105 nt0.27□□□□□ -2.37
VMA5P31412 YGL123C-AYGL123C-A 231 nt0.27□□□□□ -2.37
VMA5P31412 YGL149WYGL149W 306 nt0.27□□□□□ -2.37
VMA5P31412 RPS26AYGL189C 360 nt0.27□□□□□ -2.37
VMA5P31412 YGR069WYGR069W 336 nt0.27□□□□□ -2.37
VMA5P31412 YNL028WYNL028W 318 nt0.27□□□□□ -2.37
VMA5P31412 FMP27YLR454W 7887 nt0.27□□□□□ -2.37
VMA5P31412 ORC3YLL004W 1851 nt0.27□□□□□ -2.37
VMA5P31412 BLI1YKL061W 342 nt0.26□□□□□ -2.37
VMA5P31412 MLP2YIL149C 5040 nt0.25□□□□□ -2.37
VMA5P31412 YFL032WYFL032W 321 nt0.25□□□□□ -2.37
VMA5P31412 YNL146WYNL146W 303 nt0.25□□□□□ -2.37
VMA5P31412 ULP2YIL031W 3105 nt0.25□□□□□ -2.37
VMA5P31412 NIP1YMR309C 2439 nt0.24□□□□□ -2.37
VMA5P31412 STF2YGR008C 255 nt0.24□□□□□ -2.37
VMA5P31412 YLR120W-AYLR120W-A 102 nt0.24□□□□□ -2.37
VMA5P31412 RCO1YMR075W 2055 nt0.23□□□□□ -2.37
Retrieved 100 of 7,029 protein–RNA pairs in 42.3 ms