Protein–RNA interactions for Protein: P25339

PUF4, Pumilio homology domain family member 4, yeastyeast

Known RBP RIP-Chip data

Length 888 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
PUF4P25339 COG4YPR105C 2586 nt2.18□□□□□ -2.06
PUF4P25339 SPP41YDR464W 4308 nt2.18□□□□□ -2.06
PUF4P25339 UBP2YOR124C 3819 nt2.17□□□□□ -2.06
PUF4P25339 BRE1YDL074C 2103 nt2.17□□□□□ -2.06
PUF4P25339 SFB2YNL049C 2631 nt2.17□□□□□ -2.06
PUF4P25339 UTP21YLR409C 2820 nt2.17□□□□□ -2.06
PUF4P25339 KOG1YHR186C 4674 nt2.17□□□□□ -2.06
PUF4P25339 MDS3YGL197W 4464 nt2.16□□□□□ -2.06
PUF4P25339 NEO1YIL048W 3456 nt2.16□□□□□ -2.06
PUF4P25339 YOR019WYOR019W 2193 nt2.15□□□□□ -2.07
PUF4P25339 GCN2YDR283C 4980 nt2.15□□□□□ -2.07
PUF4P25339 YGL041C-BYGL041C-B 183 nt2.15□□□□□ -2.07
PUF4P25339 YLL054CYLL054C 2532 nt2.15□□□□□ -2.07
PUF4P25339 SAC3YDR159W 3906 nt2.14□□□□□ -2.07
PUF4P25339 YIL002W-AYIL002W-A 210 nt2.14□□□□□ -2.07
PUF4P25339 PRP5YBR237W 2550 nt2.13□□□□□ -2.07
PUF4P25339 TTI1YKL033W 3117 nt2.13□□□□□ -2.07
PUF4P25339 ADR1YDR216W 3972 nt2.13□□□□□ -2.07
PUF4P25339 SOM1YEL059C-A 225 nt2.13□□□□□ -2.07
PUF4P25339 FAB1YFR019W 6837 nt2.12□□□□□ -2.07
PUF4P25339 MGA2YIR033W 3342 nt2.12□□□□□ -2.07
PUF4P25339 YIL142C-AYIL142C-A 333 nt2.12□□□□□ -2.07
PUF4P25339 SXM1YDR395W 2835 nt2.11□□□□□ -2.07
PUF4P25339 YJR039WYJR039W 3366 nt2.11□□□□□ -2.07
PUF4P25339 NUT1YGL151W 3399 nt2.11□□□□□ -2.07
PUF4P25339 CHS6YJL099W 2241 nt2.1□□□□□ -2.07
PUF4P25339 STB6YKL072W 2301 nt2.09□□□□□ -2.07
PUF4P25339 POL5YEL055C 3069 nt2.09□□□□□ -2.07
PUF4P25339 YLR419WYLR419W 4308 nt2.09□□□□□ -2.07 RIP-Chip
PUF4P25339 SPO24YPR036W-A 204 nt2.09□□□□□ -2.07
PUF4P25339 YHR214C-BYHR214C-B 5382 nt2.09□□□□□ -2.07
PUF4P25339 APL1YJR005W 2103 nt2.09□□□□□ -2.08
PUF4P25339 ATG9YDL149W 2994 nt2.08□□□□□ -2.08
PUF4P25339 TOR2YKL203C 7425 nt2.08□□□□□ -2.08
PUF4P25339 GYP5YPL249C 2685 nt2.07□□□□□ -2.08
PUF4P25339 RCO1YMR075W 2055 nt2.07□□□□□ -2.08 RIP-Chip
PUF4P25339 PDR8YLR266C 2106 nt2.07□□□□□ -2.08
PUF4P25339 ALY2YJL084C 3141 nt2.06□□□□□ -2.08
PUF4P25339 LHS1YKL073W 2646 nt2.06□□□□□ -2.08
PUF4P25339 YGL182CYGL182C 324 nt2.06□□□□□ -2.08
PUF4P25339 EMC5YIL027C 426 nt2.06□□□□□ -2.08
PUF4P25339 YCS4YLR272C 3531 nt2.06□□□□□ -2.08
PUF4P25339 YDL206WYDL206W 2289 nt2.06□□□□□ -2.08
PUF4P25339 STF2YGR008C 255 nt2.05□□□□□ -2.08
PUF4P25339 tS(GCU)Q1tS(GCU)Q1 86 nt2.05□□□□□ -2.08
PUF4P25339 YAL067W-AYAL067W-A 228 nt2.05□□□□□ -2.08
PUF4P25339 TMA7YLR262C-A 195 nt2.05□□□□□ -2.08
PUF4P25339 FIG2YCR089W 4830 nt2.05□□□□□ -2.08
PUF4P25339 PAN2YGL094C 3348 nt2.04□□□□□ -2.08
PUF4P25339 USO1YDL058W 5373 nt2.04□□□□□ -2.08
PUF4P25339 UBR2YLR024C 5619 nt2.03□□□□□ -2.08
PUF4P25339 snR39BsnR39B 96 nt2.03□□□□□ -2.08
PUF4P25339 UFD2YDL190C 2886 nt2.02□□□□□ -2.09
PUF4P25339 YHR131W-AYHR131W-A 246 nt2.02□□□□□ -2.09
PUF4P25339 NUP157YER105C 4176 nt2.02□□□□□ -2.09
PUF4P25339 RAD50YNL250W 3939 nt2.01□□□□□ -2.09
PUF4P25339 YER172C-AYER172C-A 381 nt2.01□□□□□ -2.09
PUF4P25339 HUG1YML058W-A 207 nt2.01□□□□□ -2.09
PUF4P25339 IRC20YLR247C 4671 nt2□□□□□ -2.09 RIP-Chip
PUF4P25339 QCR9YGR183C 201 nt2□□□□□ -2.09
PUF4P25339 YBL039C-AYBL039C-A 84 nt2□□□□□ -2.09
PUF4P25339 EAF1YDR359C 2949 nt2□□□□□ -2.09
PUF4P25339 SMC1YFL008W 3678 nt1.99□□□□□ -2.09
PUF4P25339 PEP1YBL017C 4740 nt1.99□□□□□ -2.09
PUF4P25339 MMS4YBR098W 2076 nt1.99□□□□□ -2.09
PUF4P25339 YLL066W-BYLL066W-B 171 nt1.99□□□□□ -2.09
PUF4P25339 BFR2YDR299W 1605 nt1.99□□□□□ -2.09
PUF4P25339 snR45snR45 172 nt1.98□□□□□ -2.09
PUF4P25339 YLR422WYLR422W 5799 nt1.98□□□□□ -2.09
PUF4P25339 NUP192YJL039C 5052 nt1.98□□□□□ -2.09 RIP-Chip
PUF4P25339 PMD1YER132C 5262 nt1.97□□□□□ -2.09
PUF4P25339 SKI3YPR189W 4299 nt1.97□□□□□ -2.09
PUF4P25339 TBS1YBR150C 3285 nt1.97□□□□□ -2.09
PUF4P25339 KCS1YDR017C 3153 nt1.97□□□□□ -2.09
PUF4P25339 YGL123C-AYGL123C-A 231 nt1.97□□□□□ -2.09
PUF4P25339 YLL020CYLL020C 306 nt1.96□□□□□ -2.1
PUF4P25339 COA6YMR244C-A 315 nt1.96□□□□□ -2.1
PUF4P25339 YOR161W-AYOR161W-A 81 nt1.96□□□□□ -2.1
PUF4P25339 COG6YNL041C 2520 nt1.95□□□□□ -2.1 RIP-Chip
PUF4P25339 FKS1YLR342W 5631 nt1.95□□□□□ -2.1
PUF4P25339 tT(UGU)HtT(UGU)H 72 nt1.95□□□□□ -2.1
PUF4P25339 BPH1YCR032W 6504 nt1.95□□□□□ -2.1
PUF4P25339 RSM22YKL155C 1887 nt1.94□□□□□ -2.1
PUF4P25339 MYO2YOR326W 4725 nt1.94□□□□□ -2.1
PUF4P25339 YMR247W-AYMR247W-A 144 nt1.94□□□□□ -2.1
PUF4P25339 YMR045CYMR045C 5268 nt1.94□□□□□ -2.1
PUF4P25339 YKL100W-AYKL100W-A 90 nt1.93□□□□□ -2.1
PUF4P25339 snR81snR81 201 nt1.92□□□□□ -2.1
PUF4P25339 UTP8YGR128C 2142 nt1.91□□□□□ -2.1
PUF4P25339 SLX4YLR135W 2247 nt1.91□□□□□ -2.1
PUF4P25339 YOR093CYOR093C 4947 nt1.91□□□□□ -2.1
PUF4P25339 TAH1YCR060W 336 nt1.9□□□□□ -2.11
PUF4P25339 COX5BYIL111W 456 nt1.9□□□□□ -2.11
PUF4P25339 YMR272W-BYMR272W-B 108 nt1.9□□□□□ -2.11
PUF4P25339 YAR009CYAR009C 3591 nt1.89□□□□□ -2.11
PUF4P25339 snR14snR14 160 nt1.89□□□□□ -2.11
PUF4P25339 RTP1YMR185W 2946 nt1.88□□□□□ -2.11
PUF4P25339 CDC25YLR310C 4770 nt1.88□□□□□ -2.11
PUF4P25339 DNF3YMR162C 4971 nt1.88□□□□□ -2.11
PUF4P25339 SMC4YLR086W 4257 nt1.87□□□□□ -2.11
Retrieved 100 of 7,029 protein–RNA pairs in 7.6 ms