Protein–RNA interactions for Protein: P0CX27

RPL42A, 60S ribosomal protein L42-A, yeastyeast

Known RBP Predictions only

Length 106 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RPL42AP0CX27 tT(UGU)HtT(UGU)H 72 nt1.39□□□□□ -2.19
RPL42AP0CX27 RPS30BYOR182C 192 nt1.39□□□□□ -2.19
RPL42AP0CX27 TTI1YKL033W 3117 nt1.39□□□□□ -2.19
RPL42AP0CX27 YIL134C-AYIL134C-A 204 nt1.38□□□□□ -2.19
RPL42AP0CX27 COX12YLR038C 252 nt1.38□□□□□ -2.19
RPL42AP0CX27 CTF4YPR135W 2784 nt1.38□□□□□ -2.19
RPL42AP0CX27 SNU13YEL026W 381 nt1.37□□□□□ -2.19
RPL42AP0CX27 YJL022WYJL022W 309 nt1.37□□□□□ -2.19
RPL42AP0CX27 YNL211CYNL211C 261 nt1.37□□□□□ -2.19
RPL42AP0CX27 YPL044CYPL044C 549 nt1.37□□□□□ -2.19
RPL42AP0CX27 SMC4YLR086W 4257 nt1.37□□□□□ -2.19
RPL42AP0CX27 Q0143Q0143 153 nt1.36□□□□□ -2.19
RPL42AP0CX27 YAL067W-AYAL067W-A 228 nt1.36□□□□□ -2.19
RPL42AP0CX27 YMR247W-AYMR247W-A 144 nt1.36□□□□□ -2.19
RPL42AP0CX27 PRP42YDR235W 1635 nt1.36□□□□□ -2.19
RPL42AP0CX27 POL5YEL055C 3069 nt1.35□□□□□ -2.19
RPL42AP0CX27 SAC3YDR159W 3906 nt1.35□□□□□ -2.19
RPL42AP0CX27 YLR422WYLR422W 5799 nt1.35□□□□□ -2.19
RPL42AP0CX27 YCR038W-AYCR038W-A 126 nt1.35□□□□□ -2.19
RPL42AP0CX27 YBL053WYBL053W 375 nt1.35□□□□□ -2.19
RPL42AP0CX27 MEC1YBR136W 7107 nt1.35□□□□□ -2.19
RPL42AP0CX27 RSM22YKL155C 1887 nt1.35□□□□□ -2.19
RPL42AP0CX27 YAR009CYAR009C 3591 nt1.34□□□□□ -2.19
RPL42AP0CX27 YLR419WYLR419W 4308 nt1.34□□□□□ -2.19
RPL42AP0CX27 FIG2YCR089W 4830 nt1.34□□□□□ -2.19
RPL42AP0CX27 MDS3YGL197W 4464 nt1.34□□□□□ -2.2
RPL42AP0CX27 SMC1YFL008W 3678 nt1.34□□□□□ -2.2
RPL42AP0CX27 YIL002W-AYIL002W-A 210 nt1.33□□□□□ -2.2
RPL42AP0CX27 COA6YMR244C-A 315 nt1.33□□□□□ -2.2
RPL42AP0CX27 YMR272W-BYMR272W-B 108 nt1.33□□□□□ -2.2
RPL42AP0CX27 snR14snR14 160 nt1.33□□□□□ -2.2
RPL42AP0CX27 VPS15YBR097W 4365 nt1.33□□□□□ -2.2
RPL42AP0CX27 PKH3YDR466W 2697 nt1.32□□□□□ -2.2
RPL42AP0CX27 KAP122YGL016W 3246 nt1.31□□□□□ -2.2
RPL42AP0CX27 YPP1YGR198W 2454 nt1.3□□□□□ -2.2
RPL42AP0CX27 YHL015W-AYHL015W-A 84 nt1.3□□□□□ -2.2
RPL42AP0CX27 YKL100W-AYKL100W-A 90 nt1.3□□□□□ -2.2
RPL42AP0CX27 IRA1YBR140C 9279 nt1.3□□□□□ -2.2
RPL42AP0CX27 YGL123C-AYGL123C-A 231 nt1.29□□□□□ -2.2
RPL42AP0CX27 YIL020C-AYIL020C-A 339 nt1.29□□□□□ -2.2
RPL42AP0CX27 YNL205CYNL205C 423 nt1.29□□□□□ -2.2
RPL42AP0CX27 YOR102WYOR102W 351 nt1.29□□□□□ -2.2
RPL42AP0CX27 MON2YNL297C 4911 nt1.29□□□□□ -2.2
RPL42AP0CX27 PRP5YBR237W 2550 nt1.29□□□□□ -2.2
RPL42AP0CX27 STO1YMR125W 2586 nt1.28□□□□□ -2.2
RPL42AP0CX27 EAF1YDR359C 2949 nt1.28□□□□□ -2.2
RPL42AP0CX27 BST1YFL025C 3090 nt1.28□□□□□ -2.2
RPL42AP0CX27 snR48snR48 113 nt1.28□□□□□ -2.2
RPL42AP0CX27 SET3YKR029C 2256 nt1.28□□□□□ -2.2
RPL42AP0CX27 YOR019WYOR019W 2193 nt1.27□□□□□ -2.21
RPL42AP0CX27 SWI4YER111C 3282 nt1.27□□□□□ -2.21
RPL42AP0CX27 CDC25YLR310C 4770 nt1.26□□□□□ -2.21
RPL42AP0CX27 CFT1YDR301W 4074 nt1.26□□□□□ -2.21
RPL42AP0CX27 UTP8YGR128C 2142 nt1.25□□□□□ -2.21
RPL42AP0CX27 WAR1YML076C 2835 nt1.25□□□□□ -2.21
RPL42AP0CX27 YER053C-AYER053C-A 114 nt1.25□□□□□ -2.21
RPL42AP0CX27 COX5BYIL111W 456 nt1.25□□□□□ -2.21
RPL42AP0CX27 CMC4YMR194C-B 222 nt1.25□□□□□ -2.21
RPL42AP0CX27 YOR314W-AYOR314W-A 111 nt1.25□□□□□ -2.21
RPL42AP0CX27 ROM2YLR371W 4071 nt1.25□□□□□ -2.21
RPL42AP0CX27 PEP1YBL017C 4740 nt1.24□□□□□ -2.21
RPL42AP0CX27 NUP145YGL092W 3954 nt1.24□□□□□ -2.21
RPL42AP0CX27 NOP9YJL010C 2001 nt1.24□□□□□ -2.21
RPL42AP0CX27 snR85snR85 171 nt1.24□□□□□ -2.21
RPL42AP0CX27 CCH1YGR217W 6120 nt1.23□□□□□ -2.21
RPL42AP0CX27 BFR2YDR299W 1605 nt1.23□□□□□ -2.21
RPL42AP0CX27 APL3YBL037W 3078 nt1.23□□□□□ -2.21
RPL42AP0CX27 YLL020CYLL020C 306 nt1.23□□□□□ -2.21
RPL42AP0CX27 CLU1YMR012W 3834 nt1.23□□□□□ -2.21
RPL42AP0CX27 YLR282CYLR282C 342 nt1.22□□□□□ -2.21
RPL42AP0CX27 YBR200W-AYBR200W-A 165 nt1.22□□□□□ -2.21
RPL42AP0CX27 AZF1YOR113W 2745 nt1.22□□□□□ -2.21
RPL42AP0CX27 YOR161W-AYOR161W-A 81 nt1.21□□□□□ -2.22
RPL42AP0CX27 YML002WYML002W 2214 nt1.21□□□□□ -2.22
RPL42AP0CX27 EST2YLR318W 2655 nt1.21□□□□□ -2.22
RPL42AP0CX27 RPL26BYGR034W 384 nt1.2□□□□□ -2.22
RPL42AP0CX27 NUP157YER105C 4176 nt1.19□□□□□ -2.22
RPL42AP0CX27 YGL182CYGL182C 324 nt1.19□□□□□ -2.22
RPL42AP0CX27 PET127YOR017W 2403 nt1.18□□□□□ -2.22
RPL42AP0CX27 PMD1YER132C 5262 nt1.18□□□□□ -2.22
RPL42AP0CX27 SEC3YER008C 4011 nt1.18□□□□□ -2.22
RPL42AP0CX27 SSK2YNR031C 4740 nt1.18□□□□□ -2.22
RPL42AP0CX27 TRM732YMR259C 4263 nt1.18□□□□□ -2.22
RPL42AP0CX27 SXM1YDR395W 2835 nt1.17□□□□□ -2.22
RPL42AP0CX27 BRR2YER172C 6492 nt1.17□□□□□ -2.22
RPL42AP0CX27 NUP188YML103C 4968 nt1.17□□□□□ -2.22
RPL42AP0CX27 YFR012W-AYFR012W-A 87 nt1.17□□□□□ -2.22
RPL42AP0CX27 MSN5YDR335W 3675 nt1.16□□□□□ -2.22
RPL42AP0CX27 REV3YPL167C 4515 nt1.16□□□□□ -2.22
RPL42AP0CX27 CDC31YOR257W 486 nt1.16□□□□□ -2.22
RPL42AP0CX27 snR190snR190 190 nt1.16□□□□□ -2.22
RPL42AP0CX27 CHS6YJL099W 2241 nt1.16□□□□□ -2.22
RPL42AP0CX27 GEA2YEL022W 4380 nt1.16□□□□□ -2.22
RPL42AP0CX27 tL(UAA)QtL(UAA)Q 85 nt1.15□□□□□ -2.23
RPL42AP0CX27 YBL039C-AYBL039C-A 84 nt1.15□□□□□ -2.23
RPL42AP0CX27 FYV8YGR196C 2454 nt1.15□□□□□ -2.23
RPL42AP0CX27 CHS1YNL192W 3396 nt1.14□□□□□ -2.23
RPL42AP0CX27 YLR041WYLR041W 321 nt1.14□□□□□ -2.23
RPL42AP0CX27 PIK1YNL267W 3201 nt1.14□□□□□ -2.23
RPL42AP0CX27 FYV10YIL097W 1551 nt1.13□□□□□ -2.23
Retrieved 100 of 7,029 protein–RNA pairs in 76.2 ms