Protein–RNA interactions for Protein: Q07442

BDF2, Bromodomain-containing factor 2, yeastyeast

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
BDF2Q07442 snR61snR61 90 nt2.43□□□□□ -2.02
BDF2Q07442 YER172C-AYER172C-A 381 nt2.43□□□□□ -2.02
BDF2Q07442 SAS3YBL052C 2496 nt2.42□□□□□ -2.02
BDF2Q07442 YJL022WYJL022W 309 nt2.42□□□□□ -2.02
BDF2Q07442 PIG1YLR273C 1947 nt2.42□□□□□ -2.02
BDF2Q07442 YOL098CYOL098C 3114 nt2.42□□□□□ -2.02
BDF2Q07442 CHC1YGL206C 4962 nt2.41□□□□□ -2.02
BDF2Q07442 ECM12YHR021W-A 456 nt2.41□□□□□ -2.02
BDF2Q07442 TOF1YNL273W 3717 nt2.41□□□□□ -2.02
BDF2Q07442 MPT5YGL178W 2580 nt2.41□□□□□ -2.02
BDF2Q07442 BRE1YDL074C 2103 nt2.41□□□□□ -2.02
BDF2Q07442 COY1YKL179C 2040 nt2.41□□□□□ -2.02
BDF2Q07442 TDA9YML081W 3756 nt2.4□□□□□ -2.03
BDF2Q07442 SEY1YOR165W 2331 nt2.4□□□□□ -2.03
BDF2Q07442 UFD4YKL010C 4452 nt2.4□□□□□ -2.03
BDF2Q07442 MSC6YOR354C 2079 nt2.39□□□□□ -2.03
BDF2Q07442 YHR180W-AYHR180W-A 183 nt2.39□□□□□ -2.03
BDF2Q07442 YBR099CYBR099C 384 nt2.39□□□□□ -2.03
BDF2Q07442 MLH3YPL164C 2148 nt2.39□□□□□ -2.03
BDF2Q07442 FRK1YPL141C 2598 nt2.39□□□□□ -2.03
BDF2Q07442 IRC8YJL051W 2469 nt2.39□□□□□ -2.03
BDF2Q07442 BUD2YKL092C 3315 nt2.38□□□□□ -2.03
BDF2Q07442 FAB1YFR019W 6837 nt2.38□□□□□ -2.03
BDF2Q07442 YIR044CYIR044C 186 nt2.38□□□□□ -2.03
BDF2Q07442 YOR108C-AYOR108C-A 210 nt2.38□□□□□ -2.03
BDF2Q07442 MSH5YDL154W 2706 nt2.38□□□□□ -2.03
BDF2Q07442 PEP1YBL017C 4740 nt2.37□□□□□ -2.03
BDF2Q07442 AGC1YPR021C 2709 nt2.37□□□□□ -2.03
BDF2Q07442 SEC63YOR254C 1992 nt2.37□□□□□ -2.03
BDF2Q07442 HSH155YMR288W 2916 nt2.37□□□□□ -2.03
BDF2Q07442 CSF1YLR087C 8877 nt2.37□□□□□ -2.03
BDF2Q07442 YDL118WYDL118W 381 nt2.36□□□□□ -2.03
BDF2Q07442 YCR095W-AYCR095W-A 159 nt2.35□□□□□ -2.03
BDF2Q07442 YHL015W-AYHL015W-A 84 nt2.35□□□□□ -2.03
BDF2Q07442 YOR102WYOR102W 351 nt2.35□□□□□ -2.03
BDF2Q07442 YFR016CYFR016C 3702 nt2.34□□□□□ -2.03
BDF2Q07442 YDR182W-AYDR182W-A 204 nt2.34□□□□□ -2.03
BDF2Q07442 ZIP2YGL249W 2115 nt2.34□□□□□ -2.03
BDF2Q07442 YMR242W-AYMR242W-A 90 nt2.34□□□□□ -2.03
BDF2Q07442 IRC20YLR247C 4671 nt2.33□□□□□ -2.04
BDF2Q07442 DGR2YKL121W 2559 nt2.33□□□□□ -2.04
BDF2Q07442 SRP14YDL092W 441 nt2.33□□□□□ -2.04
BDF2Q07442 YGL041C-BYGL041C-B 183 nt2.33□□□□□ -2.04
BDF2Q07442 NIP100YPL174C 2607 nt2.33□□□□□ -2.04
BDF2Q07442 YOR343W-BYOR343W-B 5313 nt2.32□□□□□ -2.04
BDF2Q07442 SEC31YDL195W 3822 nt2.32□□□□□ -2.04
BDF2Q07442 PAA1YDR071C 576 nt2.32□□□□□ -2.04
BDF2Q07442 YLL066W-BYLL066W-B 171 nt2.32□□□□□ -2.04
BDF2Q07442 YBL012CYBL012C 402 nt2.32□□□□□ -2.04
BDF2Q07442 ATG9YDL149W 2994 nt2.31□□□□□ -2.04
BDF2Q07442 MYO4YAL029C 4416 nt2.31□□□□□ -2.04
BDF2Q07442 APL2YKL135C 2181 nt2.3□□□□□ -2.04
BDF2Q07442 ELG1YOR144C 2376 nt2.3□□□□□ -2.04
BDF2Q07442 YOR218CYOR218C 420 nt2.3□□□□□ -2.04
BDF2Q07442 snR45snR45 172 nt2.3□□□□□ -2.04
BDF2Q07442 PDR8YLR266C 2106 nt2.29□□□□□ -2.04
BDF2Q07442 DGR1YNL130C-A 147 nt2.29□□□□□ -2.04
BDF2Q07442 ENV11YGR071C 2583 nt2.29□□□□□ -2.04
BDF2Q07442 MCM10YIL150C 1716 nt2.28□□□□□ -2.04
BDF2Q07442 MGA2YIR033W 3342 nt2.28□□□□□ -2.04
BDF2Q07442 MSH6YDR097C 3729 nt2.28□□□□□ -2.05
BDF2Q07442 tS(GCU)Q1tS(GCU)Q1 86 nt2.27□□□□□ -2.05
BDF2Q07442 CDC31YOR257W 486 nt2.27□□□□□ -2.05
BDF2Q07442 MAD1YGL086W 2250 nt2.26□□□□□ -2.05
BDF2Q07442 YFR012W-AYFR012W-A 87 nt2.26□□□□□ -2.05
BDF2Q07442 YLR282CYLR282C 342 nt2.26□□□□□ -2.05
BDF2Q07442 YMR272W-BYMR272W-B 108 nt2.26□□□□□ -2.05
BDF2Q07442 YOR072W-BYOR072W-B 162 nt2.26□□□□□ -2.05
BDF2Q07442 SPC98YNL126W 2541 nt2.26□□□□□ -2.05
BDF2Q07442 USO1YDL058W 5373 nt2.26□□□□□ -2.05
BDF2Q07442 SPP41YDR464W 4308 nt2.26□□□□□ -2.05
BDF2Q07442 RAD34YDR314C 2079 nt2.26□□□□□ -2.05
BDF2Q07442 RGA1YOR127W 3024 nt2.25□□□□□ -2.05
BDF2Q07442 SPO75YLL005C 2607 nt2.25□□□□□ -2.05
BDF2Q07442 HIR3YJR140C 4947 nt2.25□□□□□ -2.05
BDF2Q07442 tL(UAA)QtL(UAA)Q 85 nt2.25□□□□□ -2.05
BDF2Q07442 YNL211CYNL211C 261 nt2.25□□□□□ -2.05
BDF2Q07442 SFB2YNL049C 2631 nt2.25□□□□□ -2.05
BDF2Q07442 CTF4YPR135W 2784 nt2.24□□□□□ -2.05
BDF2Q07442 TOR2YKL203C 7425 nt2.24□□□□□ -2.05
BDF2Q07442 YDL196WYDL196W 330 nt2.24□□□□□ -2.05
BDF2Q07442 AHC1YOR023C 1701 nt2.24□□□□□ -2.05
BDF2Q07442 UTP21YLR409C 2820 nt2.23□□□□□ -2.05
BDF2Q07442 OST4YDL232W 111 nt2.23□□□□□ -2.05
BDF2Q07442 YBR174CYBR174C 315 nt2.23□□□□□ -2.05
BDF2Q07442 YBR221W-AYBR221W-A 105 nt2.23□□□□□ -2.05
BDF2Q07442 HSL1YKL101W 4557 nt2.23□□□□□ -2.05
BDF2Q07442 snR62snR62 100 nt2.22□□□□□ -2.05
BDF2Q07442 PAU3YCR104W 375 nt2.22□□□□□ -2.05
BDF2Q07442 YLL019W-AYLL019W-A 93 nt2.22□□□□□ -2.05
BDF2Q07442 YNL144CYNL144C 2223 nt2.22□□□□□ -2.05
BDF2Q07442 UBP2YOR124C 3819 nt2.21□□□□□ -2.06
BDF2Q07442 HAL9YOL089C 3093 nt2.21□□□□□ -2.06
BDF2Q07442 YPL044CYPL044C 549 nt2.21□□□□□ -2.06
BDF2Q07442 NUP192YJL039C 5052 nt2.21□□□□□ -2.06
BDF2Q07442 TRM3YDL112W 4311 nt2.21□□□□□ -2.06
BDF2Q07442 YMR045CYMR045C 5268 nt2.2□□□□□ -2.06
BDF2Q07442 NOC3YLR002C 1992 nt2.2□□□□□ -2.06
BDF2Q07442 YJR039WYJR039W 3366 nt2.19□□□□□ -2.06
BDF2Q07442 PTP2YOR208W 2253 nt2.19□□□□□ -2.06
Retrieved 100 of 7,029 protein–RNA pairs in 15.3 ms