Protein–RNA interactions for Protein: Q04839

GFD1, mRNA transport factor GFD1, yeastyeast

Known RBP Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
GFD1Q04839 MYO2YOR326W 4725 nt1.87□□□□□ -2.11
GFD1Q04839 YBR174CYBR174C 315 nt1.87□□□□□ -2.11
GFD1Q04839 TUS1YLR425W 3924 nt1.86□□□□□ -2.11
GFD1Q04839 TRS65YGR166W 1683 nt1.86□□□□□ -2.11
GFD1Q04839 PRP39YML046W 1890 nt1.86□□□□□ -2.11
GFD1Q04839 BUD2YKL092C 3315 nt1.85□□□□□ -2.11
GFD1Q04839 PIG1YLR273C 1947 nt1.85□□□□□ -2.11
GFD1Q04839 MAK10YEL053C 2202 nt1.85□□□□□ -2.11
GFD1Q04839 RTT101YJL047C 2529 nt1.84□□□□□ -2.11
GFD1Q04839 MLH3YPL164C 2148 nt1.84□□□□□ -2.11
GFD1Q04839 SAS3YBL052C 2496 nt1.84□□□□□ -2.12
GFD1Q04839 LRE1YCL051W 1752 nt1.84□□□□□ -2.12
GFD1Q04839 PAU3YCR104W 375 nt1.83□□□□□ -2.12
GFD1Q04839 YEL014CYEL014C 306 nt1.83□□□□□ -2.12
GFD1Q04839 YHR210CYHR210C 1026 nt1.83□□□□□ -2.12
GFD1Q04839 snR46snR46 197 nt1.83□□□□□ -2.12
GFD1Q04839 DCP2YNL118C 2913 nt1.82□□□□□ -2.12
GFD1Q04839 tT(UGU)HtT(UGU)H 72 nt1.82□□□□□ -2.12
GFD1Q04839 YOR108C-AYOR108C-A 210 nt1.82□□□□□ -2.12
GFD1Q04839 YDL007C-AYDL007C-A 258 nt1.81□□□□□ -2.12
GFD1Q04839 Q0092Q0092 141 nt1.81□□□□□ -2.12
GFD1Q04839 COF1YLL050C 432 nt1.81□□□□□ -2.12
GFD1Q04839 UTP21YLR409C 2820 nt1.81□□□□□ -2.12
GFD1Q04839 YNL144CYNL144C 2223 nt1.81□□□□□ -2.12
GFD1Q04839 ECM12YHR021W-A 456 nt1.8□□□□□ -2.12
GFD1Q04839 CTR9YOL145C 3234 nt1.8□□□□□ -2.12
GFD1Q04839 MCM10YIL150C 1716 nt1.8□□□□□ -2.12
GFD1Q04839 MDS3YGL197W 4464 nt1.79□□□□□ -2.12
GFD1Q04839 DGR2YKL121W 2559 nt1.79□□□□□ -2.12
GFD1Q04839 LHS1YKL073W 2646 nt1.79□□□□□ -2.12
GFD1Q04839 PET309YLR067C 2898 nt1.79□□□□□ -2.12
GFD1Q04839 YDR521WYDR521W 336 nt1.79□□□□□ -2.12
GFD1Q04839 YLR342W-AYLR342W-A 174 nt1.79□□□□□ -2.12
GFD1Q04839 YMR247W-AYMR247W-A 144 nt1.79□□□□□ -2.12
GFD1Q04839 YOR345CYOR345C 351 nt1.79□□□□□ -2.12
GFD1Q04839 HMI1YOL095C 2121 nt1.79□□□□□ -2.12
GFD1Q04839 YOR093CYOR093C 4947 nt1.78□□□□□ -2.12
GFD1Q04839 YMR175W-AYMR175W-A 195 nt1.78□□□□□ -2.12
GFD1Q04839 YBR206WYBR206W 324 nt1.78□□□□□ -2.12
GFD1Q04839 YGR109W-BYGR109W-B 4644 nt1.78□□□□□ -2.13
GFD1Q04839 AHC1YOR023C 1701 nt1.77□□□□□ -2.13
GFD1Q04839 TBS1YBR150C 3285 nt1.77□□□□□ -2.13
GFD1Q04839 MYO4YAL029C 4416 nt1.76□□□□□ -2.13
GFD1Q04839 YLL007CYLL007C 1998 nt1.76□□□□□ -2.13
GFD1Q04839 YLL019W-AYLL019W-A 93 nt1.76□□□□□ -2.13
GFD1Q04839 COA6YMR244C-A 315 nt1.76□□□□□ -2.13
GFD1Q04839 MEC1YBR136W 7107 nt1.76□□□□□ -2.13
GFD1Q04839 IFH1YLR223C 3258 nt1.75□□□□□ -2.13
GFD1Q04839 YLR035C-AYLR035C-A 3468 nt1.75□□□□□ -2.13
GFD1Q04839 YIR044CYIR044C 186 nt1.75□□□□□ -2.13
GFD1Q04839 ALK1YGL021W 2283 nt1.75□□□□□ -2.13
GFD1Q04839 MON2YNL297C 4911 nt1.74□□□□□ -2.13
GFD1Q04839 YDL196WYDL196W 330 nt1.74□□□□□ -2.13
GFD1Q04839 ULI1YFR026C 510 nt1.74□□□□□ -2.13
GFD1Q04839 YOR072W-BYOR072W-B 162 nt1.74□□□□□ -2.13
GFD1Q04839 HER1YOR227W 3741 nt1.73□□□□□ -2.13
GFD1Q04839 PKH3YDR466W 2697 nt1.73□□□□□ -2.13
GFD1Q04839 IRE1YHR079C 3348 nt1.73□□□□□ -2.13
GFD1Q04839 COG4YPR105C 2586 nt1.72□□□□□ -2.13
GFD1Q04839 DNF3YMR162C 4971 nt1.71□□□□□ -2.14
GFD1Q04839 PMP1YCR024C-A 123 nt1.71□□□□□ -2.14
GFD1Q04839 ATP8Q0080 147 nt1.71□□□□□ -2.14
GFD1Q04839 RPL33BYOR234C 324 nt1.71□□□□□ -2.14
GFD1Q04839 snR52snR52 92 nt1.71□□□□□ -2.14
GFD1Q04839 TRM3YDL112W 4311 nt1.71□□□□□ -2.14
GFD1Q04839 CUL3YGR003W 2235 nt1.71□□□□□ -2.14
GFD1Q04839 SEC63YOR254C 1992 nt1.7□□□□□ -2.14
GFD1Q04839 PTP2YOR208W 2253 nt1.7□□□□□ -2.14
GFD1Q04839 IRA1YBR140C 9279 nt1.7□□□□□ -2.14
GFD1Q04839 SEY1YOR165W 2331 nt1.7□□□□□ -2.14
GFD1Q04839 SPO24YPR036W-A 204 nt1.7□□□□□ -2.14
GFD1Q04839 MSH6YDR097C 3729 nt1.7□□□□□ -2.14
GFD1Q04839 SFB2YNL049C 2631 nt1.7□□□□□ -2.14
GFD1Q04839 TDA9YML081W 3756 nt1.69□□□□□ -2.14
GFD1Q04839 YIL134C-AYIL134C-A 204 nt1.69□□□□□ -2.14
GFD1Q04839 NUT1YGL151W 3399 nt1.69□□□□□ -2.14
GFD1Q04839 COY1YKL179C 2040 nt1.69□□□□□ -2.14
GFD1Q04839 SLI15YBR156C 2097 nt1.68□□□□□ -2.14
GFD1Q04839 YJR039WYJR039W 3366 nt1.68□□□□□ -2.14
GFD1Q04839 FIG4YNL325C 2640 nt1.68□□□□□ -2.14
GFD1Q04839 YDR354C-AYDR354C-A 144 nt1.68□□□□□ -2.14
GFD1Q04839 KIP1YBL063W 3336 nt1.68□□□□□ -2.14
GFD1Q04839 HAL9YOL089C 3093 nt1.68□□□□□ -2.14
GFD1Q04839 VPS15YBR097W 4365 nt1.68□□□□□ -2.14
GFD1Q04839 PKH2YOL100W 3246 nt1.68□□□□□ -2.14
GFD1Q04839 PIP2YOR363C 2991 nt1.68□□□□□ -2.14
GFD1Q04839 FRK1YPL141C 2598 nt1.67□□□□□ -2.14
GFD1Q04839 KCS1YDR017C 3153 nt1.67□□□□□ -2.14
GFD1Q04839 ANS1YHR126C 480 nt1.67□□□□□ -2.14
GFD1Q04839 TRM732YMR259C 4263 nt1.67□□□□□ -2.14
GFD1Q04839 SLD3YGL113W 2007 nt1.66□□□□□ -2.14
GFD1Q04839 AIM44YPL158C 2277 nt1.66□□□□□ -2.14
GFD1Q04839 YJL026C-AYJL026C-A 222 nt1.65□□□□□ -2.15
GFD1Q04839 SBE22YHR103W 2559 nt1.65□□□□□ -2.15
GFD1Q04839 CAT8YMR280C 4302 nt1.64□□□□□ -2.15
GFD1Q04839 BRR2YER172C 6492 nt1.64□□□□□ -2.15
GFD1Q04839 CTF4YPR135W 2784 nt1.64□□□□□ -2.15
GFD1Q04839 NCA2YPR155C 1851 nt1.64□□□□□ -2.15
GFD1Q04839 PBY1YBR094W 2262 nt1.64□□□□□ -2.15
GFD1Q04839 CCH1YGR217W 6120 nt1.64□□□□□ -2.15
Retrieved 100 of 7,029 protein–RNA pairs in 39.6 ms