Protein–RNA interactions for Protein: P38165

RTG3, Retrograde regulation protein 3, yeastyeast

Predictions only

Length 486 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RTG3P38165 TCB2YNL087W 3537 nt3.52□□□□□ -1.85
RTG3P38165 RPS28BYLR264W 204 nt3.51□□□□□ -1.85
RTG3P38165 MAK10YEL053C 2202 nt3.51□□□□□ -1.85
RTG3P38165 COG4YPR105C 2586 nt3.51□□□□□ -1.85
RTG3P38165 YMR175W-AYMR175W-A 195 nt3.5□□□□□ -1.85
RTG3P38165 FLO1YAR050W 4614 nt3.5□□□□□ -1.85
RTG3P38165 SGM1YJR134C 2124 nt3.5□□□□□ -1.85
RTG3P38165 PKH2YOL100W 3246 nt3.49□□□□□ -1.85
RTG3P38165 MLH3YPL164C 2148 nt3.49□□□□□ -1.85
RTG3P38165 FLO9YAL063C 3969 nt3.48□□□□□ -1.85
RTG3P38165 YDR210WYDR210W 228 nt3.48□□□□□ -1.85
RTG3P38165 YOL164W-AYOL164W-A 183 nt3.48□□□□□ -1.85
RTG3P38165 AXL1YPR122W 3627 nt3.48□□□□□ -1.85
RTG3P38165 DNA2YHR164C 4569 nt3.48□□□□□ -1.85
RTG3P38165 UFD2YDL190C 2886 nt3.47□□□□□ -1.85
RTG3P38165 RPS26AYGL189C 360 nt3.47□□□□□ -1.85
RTG3P38165 YKL100W-AYKL100W-A 90 nt3.47□□□□□ -1.85
RTG3P38165 YDL206WYDL206W 2289 nt3.46□□□□□ -1.85
RTG3P38165 RTT107YHR154W 3213 nt3.46□□□□□ -1.86
RTG3P38165 INP51YIL002C 2841 nt3.46□□□□□ -1.86
RTG3P38165 IST2YBR086C 2841 nt3.46□□□□□ -1.86
RTG3P38165 YJL127W-AYJL127W-A 117 nt3.46□□□□□ -1.86
RTG3P38165 CBF2YGR140W 2871 nt3.46□□□□□ -1.86
RTG3P38165 BUB1YGR188C 3066 nt3.46□□□□□ -1.86
RTG3P38165 ISW1YBR245C 3390 nt3.46□□□□□ -1.86
RTG3P38165 SCP160YJL080C 3669 nt3.46□□□□□ -1.86
RTG3P38165 GLG1YKR058W 1851 nt3.45□□□□□ -1.86
RTG3P38165 RPN1YHR027C 2982 nt3.45□□□□□ -1.86
RTG3P38165 YBR109W-AYBR109W-A 225 nt3.45□□□□□ -1.86
RTG3P38165 snR64snR64 101 nt3.44□□□□□ -1.86
RTG3P38165 VPS8YAL002W 3825 nt3.43□□□□□ -1.86
RTG3P38165 TBS1YBR150C 3285 nt3.42□□□□□ -1.86
RTG3P38165 MSH5YDL154W 2706 nt3.42□□□□□ -1.86
RTG3P38165 RIF1YBR275C 5751 nt3.41□□□□□ -1.86
RTG3P38165 YLR278CYLR278C 4026 nt3.41□□□□□ -1.86
RTG3P38165 snR70snR70 164 nt3.4□□□□□ -1.87
RTG3P38165 JSN1YJR091C 3276 nt3.39□□□□□ -1.87
RTG3P38165 SLI15YBR156C 2097 nt3.39□□□□□ -1.87
RTG3P38165 YGR146C-AYGR146C-A 162 nt3.39□□□□□ -1.87
RTG3P38165 SMC6YLR383W 3345 nt3.39□□□□□ -1.87
RTG3P38165 BUD2YKL092C 3315 nt3.39□□□□□ -1.87
RTG3P38165 STT4YLR305C 5703 nt3.39□□□□□ -1.87
RTG3P38165 ESL1YIL151C 3357 nt3.38□□□□□ -1.87
RTG3P38165 SSN2YDR443C 4263 nt3.38□□□□□ -1.87
RTG3P38165 YOR161W-AYOR161W-A 81 nt3.38□□□□□ -1.87
RTG3P38165 YER078W-AYER078W-A 165 nt3.37□□□□□ -1.87
RTG3P38165 snR50snR50 90 nt3.37□□□□□ -1.87
RTG3P38165 RTP1YMR185W 2946 nt3.37□□□□□ -1.87
RTG3P38165 PDR1YGL013C 3207 nt3.36□□□□□ -1.87
RTG3P38165 POL5YEL055C 3069 nt3.36□□□□□ -1.87
RTG3P38165 ADR1YDR216W 3972 nt3.35□□□□□ -1.87
RTG3P38165 MDS3YGL197W 4464 nt3.34□□□□□ -1.87
RTG3P38165 SEC26YDR238C 2922 nt3.34□□□□□ -1.87
RTG3P38165 BCK1YJL095W 4437 nt3.34□□□□□ -1.87
RTG3P38165 PNC1YGL037C 651 nt3.34□□□□□ -1.87
RTG3P38165 YLR232WYLR232W 348 nt3.33□□□□□ -1.88
RTG3P38165 BPT1YLL015W 4680 nt3.32□□□□□ -1.88
RTG3P38165 PDR3YBL005W 2931 nt3.31□□□□□ -1.88
RTG3P38165 RSM22YKL155C 1887 nt3.31□□□□□ -1.88
RTG3P38165 YBR196C-AYBR196C-A 150 nt3.31□□□□□ -1.88
RTG3P38165 snR47snR47 99 nt3.31□□□□□ -1.88
RTG3P38165 ASE1YOR058C 2658 nt3.31□□□□□ -1.88
RTG3P38165 TUS1YLR425W 3924 nt3.31□□□□□ -1.88
RTG3P38165 AGC1YPR021C 2709 nt3.3□□□□□ -1.88
RTG3P38165 ESL2YKR096W 3588 nt3.3□□□□□ -1.88
RTG3P38165 SEC7YDR170C 6030 nt3.29□□□□□ -1.88
RTG3P38165 YIL082W-AYIL082W-A 4497 nt3.29□□□□□ -1.88
RTG3P38165 FKS3YMR306W 5358 nt3.29□□□□□ -1.88
RTG3P38165 YLR286W-AYLR286W-A 135 nt3.28□□□□□ -1.88
RTG3P38165 TRM3YDL112W 4311 nt3.28□□□□□ -1.88
RTG3P38165 ORC3YLL004W 1851 nt3.28□□□□□ -1.88
RTG3P38165 CAF120YNL278W 3183 nt3.28□□□□□ -1.88
RTG3P38165 MET18YIL128W 3099 nt3.28□□□□□ -1.89
RTG3P38165 YOR055WYOR055W 435 nt3.27□□□□□ -1.89
RTG3P38165 SVL3YPL032C 2478 nt3.27□□□□□ -1.89
RTG3P38165 YML002WYML002W 2214 nt3.25□□□□□ -1.89
RTG3P38165 ECM29YHL030W 5607 nt3.25□□□□□ -1.89
RTG3P38165 AMS1YGL156W 3252 nt3.25□□□□□ -1.89
RTG3P38165 DYN1YKR054C 12279 nt3.24□□□□□ -1.89
RTG3P38165 SPO71YDR104C 3738 nt3.24□□□□□ -1.89
RTG3P38165 NAB6YML117W 3405 nt3.23□□□□□ -1.89
RTG3P38165 FRK1YPL141C 2598 nt3.23□□□□□ -1.89
RTG3P38165 MRD1YPR112C 2664 nt3.23□□□□□ -1.89
RTG3P38165 YKL096C-BYKL096C-B 150 nt3.22□□□□□ -1.89
RTG3P38165 RPM2YML091C 3609 nt3.22□□□□□ -1.89
RTG3P38165 CDC60YPL160W 3273 nt3.21□□□□□ -1.9
RTG3P38165 NUP100YKL068W 2880 nt3.21□□□□□ -1.9
RTG3P38165 YER172C-AYER172C-A 381 nt3.21□□□□□ -1.9
RTG3P38165 RAD9YDR217C 3930 nt3.2□□□□□ -1.9
RTG3P38165 snR75snR75 89 nt3.2□□□□□ -1.9
RTG3P38165 MSB1YOR188W 3414 nt3.2□□□□□ -1.9
RTG3P38165 GCN2YDR283C 4980 nt3.2□□□□□ -1.9
RTG3P38165 CTR9YOL145C 3234 nt3.19□□□□□ -1.9
RTG3P38165 YLR041WYLR041W 321 nt3.19□□□□□ -1.9
RTG3P38165 ARP8YOR141C 2646 nt3.19□□□□□ -1.9
RTG3P38165 MOT1YPL082C 5604 nt3.18□□□□□ -1.9
RTG3P38165 SEC21YNL287W 2808 nt3.18□□□□□ -1.9
RTG3P38165 SEY1YOR165W 2331 nt3.17□□□□□ -1.9
RTG3P38165 NOP9YJL010C 2001 nt3.17□□□□□ -1.9
RTG3P38165 PRP8YHR165C 7242 nt3.16□□□□□ -1.9
Retrieved 100 of 7,029 protein–RNA pairs in 13.2 ms