Protein–RNA interactions for Protein: P0CX72

TY1A-LR2, Transposon Ty1-LR2 Gag polyprotein, yeastyeast

Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
TY1A-LR2P0CX72 snR61snR61 90 nt2.25□□□□□ -2.05
TY1A-LR2P0CX72 OST4YDL232W 111 nt2.25□□□□□ -2.05
TY1A-LR2P0CX72 YOR343W-BYOR343W-B 5313 nt2.25□□□□□ -2.05
TY1A-LR2P0CX72 YBL005W-BYBL005W-B 5268 nt2.25□□□□□ -2.05
TY1A-LR2P0CX72 SAP185YJL098W 3177 nt2.24□□□□□ -2.05
TY1A-LR2P0CX72 TIM9YEL020W-A 264 nt2.24□□□□□ -2.05
TY1A-LR2P0CX72 tK(UUU)DtK(UUU)D 73 nt2.23□□□□□ -2.05
TY1A-LR2P0CX72 tK(UUU)G1tK(UUU)G1 73 nt2.23□□□□□ -2.05
TY1A-LR2P0CX72 tK(UUU)G2tK(UUU)G2 73 nt2.23□□□□□ -2.05
TY1A-LR2P0CX72 tK(UUU)KtK(UUU)K 73 nt2.23□□□□□ -2.05
TY1A-LR2P0CX72 tK(UUU)LtK(UUU)L 73 nt2.23□□□□□ -2.05
TY1A-LR2P0CX72 tK(UUU)OtK(UUU)O 73 nt2.23□□□□□ -2.05
TY1A-LR2P0CX72 tK(UUU)PtK(UUU)P 73 nt2.23□□□□□ -2.05
TY1A-LR2P0CX72 YLR282CYLR282C 342 nt2.23□□□□□ -2.05
TY1A-LR2P0CX72 NAB6YML117W 3405 nt2.23□□□□□ -2.05
TY1A-LR2P0CX72 GCN2YDR283C 4980 nt2.23□□□□□ -2.05
TY1A-LR2P0CX72 SEY1YOR165W 2331 nt2.23□□□□□ -2.05
TY1A-LR2P0CX72 YGR109W-BYGR109W-B 4644 nt2.22□□□□□ -2.05
TY1A-LR2P0CX72 ARP8YOR141C 2646 nt2.22□□□□□ -2.05
TY1A-LR2P0CX72 CHS6YJL099W 2241 nt2.22□□□□□ -2.05
TY1A-LR2P0CX72 SEC26YDR238C 2922 nt2.22□□□□□ -2.05
TY1A-LR2P0CX72 RGC1YPR115W 3252 nt2.22□□□□□ -2.05
TY1A-LR2P0CX72 YDL206WYDL206W 2289 nt2.21□□□□□ -2.06
TY1A-LR2P0CX72 UTP8YGR128C 2142 nt2.2□□□□□ -2.06
TY1A-LR2P0CX72 SOM1YEL059C-A 225 nt2.2□□□□□ -2.06
TY1A-LR2P0CX72 SBH1YER087C-B 249 nt2.2□□□□□ -2.06
TY1A-LR2P0CX72 SPF1YEL031W 3648 nt2.2□□□□□ -2.06
TY1A-LR2P0CX72 SFB2YNL049C 2631 nt2.2□□□□□ -2.06
TY1A-LR2P0CX72 HER1YOR227W 3741 nt2.19□□□□□ -2.06
TY1A-LR2P0CX72 IST2YBR086C 2841 nt2.18□□□□□ -2.06
TY1A-LR2P0CX72 TDA9YML081W 3756 nt2.18□□□□□ -2.06
TY1A-LR2P0CX72 YLL054CYLL054C 2532 nt2.18□□□□□ -2.06
TY1A-LR2P0CX72 YDL118WYDL118W 381 nt2.18□□□□□ -2.06
TY1A-LR2P0CX72 SVL3YPL032C 2478 nt2.18□□□□□ -2.06
TY1A-LR2P0CX72 TRM3YDL112W 4311 nt2.17□□□□□ -2.06
TY1A-LR2P0CX72 SEC63YOR254C 1992 nt2.17□□□□□ -2.06
TY1A-LR2P0CX72 IRA2YOL081W 9240 nt2.16□□□□□ -2.06
TY1A-LR2P0CX72 YLL020CYLL020C 306 nt2.16□□□□□ -2.06
TY1A-LR2P0CX72 YAL067W-AYAL067W-A 228 nt2.16□□□□□ -2.06
TY1A-LR2P0CX72 YNL067W-BYNL067W-B 141 nt2.16□□□□□ -2.06
TY1A-LR2P0CX72 YOR055WYOR055W 435 nt2.16□□□□□ -2.06
TY1A-LR2P0CX72 CSF1YLR087C 8877 nt2.16□□□□□ -2.06
TY1A-LR2P0CX72 YPR097WYPR097W 3222 nt2.15□□□□□ -2.06
TY1A-LR2P0CX72 LHS1YKL073W 2646 nt2.15□□□□□ -2.06
TY1A-LR2P0CX72 YGL182CYGL182C 324 nt2.15□□□□□ -2.07
TY1A-LR2P0CX72 YKL100W-AYKL100W-A 90 nt2.15□□□□□ -2.07
TY1A-LR2P0CX72 UTP21YLR409C 2820 nt2.15□□□□□ -2.07
TY1A-LR2P0CX72 HIR3YJR140C 4947 nt2.15□□□□□ -2.07
TY1A-LR2P0CX72 DNF1YER166W 4716 nt2.14□□□□□ -2.07
TY1A-LR2P0CX72 RSM22YKL155C 1887 nt2.14□□□□□ -2.07
TY1A-LR2P0CX72 YGL123C-AYGL123C-A 231 nt2.14□□□□□ -2.07
TY1A-LR2P0CX72 SPO24YPR036W-A 204 nt2.14□□□□□ -2.07
TY1A-LR2P0CX72 YPP1YGR198W 2454 nt2.13□□□□□ -2.07
TY1A-LR2P0CX72 IRC8YJL051W 2469 nt2.13□□□□□ -2.07
TY1A-LR2P0CX72 STF2YGR008C 255 nt2.13□□□□□ -2.07
TY1A-LR2P0CX72 KOG1YHR186C 4674 nt2.13□□□□□ -2.07
TY1A-LR2P0CX72 YOL098CYOL098C 3114 nt2.13□□□□□ -2.07
TY1A-LR2P0CX72 TOR1YJR066W 7413 nt2.13□□□□□ -2.07
TY1A-LR2P0CX72 UFD2YDL190C 2886 nt2.12□□□□□ -2.07
TY1A-LR2P0CX72 MSH6YDR097C 3729 nt2.12□□□□□ -2.07
TY1A-LR2P0CX72 STE11YLR362W 2154 nt2.12□□□□□ -2.07
TY1A-LR2P0CX72 YPL150WYPL150W 2706 nt2.11□□□□□ -2.07
TY1A-LR2P0CX72 YER172C-AYER172C-A 381 nt2.11□□□□□ -2.07
TY1A-LR2P0CX72 BFR2YDR299W 1605 nt2.1□□□□□ -2.07
TY1A-LR2P0CX72 TOF1YNL273W 3717 nt2.09□□□□□ -2.07
TY1A-LR2P0CX72 HSL1YKL101W 4557 nt2.09□□□□□ -2.07
TY1A-LR2P0CX72 TBS1YBR150C 3285 nt2.09□□□□□ -2.08
TY1A-LR2P0CX72 MYO4YAL029C 4416 nt2.09□□□□□ -2.08
TY1A-LR2P0CX72 YOR296WYOR296W 3870 nt2.09□□□□□ -2.08
TY1A-LR2P0CX72 SMC1YFL008W 3678 nt2.09□□□□□ -2.08
TY1A-LR2P0CX72 BCK1YJL095W 4437 nt2.08□□□□□ -2.08
TY1A-LR2P0CX72 YJR039WYJR039W 3366 nt2.08□□□□□ -2.08
TY1A-LR2P0CX72 QCR9YGR183C 201 nt2.08□□□□□ -2.08
TY1A-LR2P0CX72 NUT1YGL151W 3399 nt2.08□□□□□ -2.08
TY1A-LR2P0CX72 VPS13YLL040C 9435 nt2.07□□□□□ -2.08
TY1A-LR2P0CX72 YPL216WYPL216W 3309 nt2.07□□□□□ -2.08
TY1A-LR2P0CX72 TCB2YNL087W 3537 nt2.07□□□□□ -2.08
TY1A-LR2P0CX72 MMS4YBR098W 2076 nt2.06□□□□□ -2.08
TY1A-LR2P0CX72 SLN1YIL147C 3663 nt2.06□□□□□ -2.08
TY1A-LR2P0CX72 PAN2YGL094C 3348 nt2.06□□□□□ -2.08
TY1A-LR2P0CX72 MDS3YGL197W 4464 nt2.06□□□□□ -2.08
TY1A-LR2P0CX72 COA6YMR244C-A 315 nt2.06□□□□□ -2.08
TY1A-LR2P0CX72 RAD50YNL250W 3939 nt2.06□□□□□ -2.08
TY1A-LR2P0CX72 STH1YIL126W 4080 nt2.06□□□□□ -2.08
TY1A-LR2P0CX72 BNI1YNL271C 5862 nt2.05□□□□□ -2.08
TY1A-LR2P0CX72 POL5YEL055C 3069 nt2.05□□□□□ -2.08
TY1A-LR2P0CX72 YGL041C-BYGL041C-B 183 nt2.05□□□□□ -2.08
TY1A-LR2P0CX72 EMC5YIL027C 426 nt2.05□□□□□ -2.08
TY1A-LR2P0CX72 YBL039C-AYBL039C-A 84 nt2.05□□□□□ -2.08
TY1A-LR2P0CX72 ALY2YJL084C 3141 nt2.05□□□□□ -2.08
TY1A-LR2P0CX72 GYP5YPL249C 2685 nt2.04□□□□□ -2.08
TY1A-LR2P0CX72 SIR4YDR227W 4077 nt2.04□□□□□ -2.08
TY1A-LR2P0CX72 PDR1YGL013C 3207 nt2.04□□□□□ -2.08
TY1A-LR2P0CX72 COX5BYIL111W 456 nt2.04□□□□□ -2.08
TY1A-LR2P0CX72 KIP1YBL063W 3336 nt2.04□□□□□ -2.08
TY1A-LR2P0CX72 SUP56tL(CAA)A 82 nt2.03□□□□□ -2.08
TY1A-LR2P0CX72 SUP53tL(CAA)C 82 nt2.03□□□□□ -2.08
TY1A-LR2P0CX72 tL(CAA)DtL(CAA)D 82 nt2.03□□□□□ -2.08
TY1A-LR2P0CX72 tL(CAA)G1tL(CAA)G1 82 nt2.03□□□□□ -2.08
TY1A-LR2P0CX72 SUP54tL(CAA)G2 82 nt2.03□□□□□ -2.08
Retrieved 100 of 7,029 protein–RNA pairs in 155.3 ms