Protein–RNA interactions for Protein: P0CX58

TY1A-PR1, Transposon Ty1-PR1 Gag polyprotein, yeastyeast

Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
TY1A-PR1P0CX58 YJR039WYJR039W 3366 nt2.76□□□□□ -1.97
TY1A-PR1P0CX58 GLG1YKR058W 1851 nt2.75□□□□□ -1.97
TY1A-PR1P0CX58 RSE1YML049C 4086 nt2.75□□□□□ -1.97
TY1A-PR1P0CX58 YER078W-AYER078W-A 165 nt2.74□□□□□ -1.97
TY1A-PR1P0CX58 IRE1YHR079C 3348 nt2.74□□□□□ -1.97
TY1A-PR1P0CX58 SEC21YNL287W 2808 nt2.73□□□□□ -1.97
TY1A-PR1P0CX58 DBP10YDL031W 2988 nt2.73□□□□□ -1.97
TY1A-PR1P0CX58 TUS1YLR425W 3924 nt2.72□□□□□ -1.97
TY1A-PR1P0CX58 DRS2YAL026C 4068 nt2.72□□□□□ -1.97
TY1A-PR1P0CX58 MDS3YGL197W 4464 nt2.72□□□□□ -1.97
TY1A-PR1P0CX58 MET18YIL128W 3099 nt2.72□□□□□ -1.97
TY1A-PR1P0CX58 YER172C-AYER172C-A 381 nt2.71□□□□□ -1.98
TY1A-PR1P0CX58 NMD2YHR077C 3270 nt2.71□□□□□ -1.98
TY1A-PR1P0CX58 SLH1YGR271W 5904 nt2.71□□□□□ -1.98
TY1A-PR1P0CX58 TMA17YDL110C 453 nt2.7□□□□□ -1.98
TY1A-PR1P0CX58 YKL162C-AYKL162C-A 153 nt2.7□□□□□ -1.98
TY1A-PR1P0CX58 YEF3YLR249W 3135 nt2.69□□□□□ -1.98
TY1A-PR1P0CX58 POL5YEL055C 3069 nt2.69□□□□□ -1.98
TY1A-PR1P0CX58 tL(UAG)JtL(UAG)J 82 nt2.69□□□□□ -1.98
TY1A-PR1P0CX58 tL(UAG)L1tL(UAG)L1 82 nt2.69□□□□□ -1.98
TY1A-PR1P0CX58 tL(UAG)L2tL(UAG)L2 82 nt2.69□□□□□ -1.98
TY1A-PR1P0CX58 SMC1YFL008W 3678 nt2.69□□□□□ -1.98
TY1A-PR1P0CX58 PET309YLR067C 2898 nt2.69□□□□□ -1.98
TY1A-PR1P0CX58 PMR1YGL167C 2853 nt2.68□□□□□ -1.98
TY1A-PR1P0CX58 PNC1YGL037C 651 nt2.68□□□□□ -1.98
TY1A-PR1P0CX58 TRM3YDL112W 4311 nt2.68□□□□□ -1.98
TY1A-PR1P0CX58 FLO1YAR050W 4614 nt2.68□□□□□ -1.98
TY1A-PR1P0CX58 COA6YMR244C-A 315 nt2.67□□□□□ -1.98
TY1A-PR1P0CX58 AKR1YDR264C 2295 nt2.66□□□□□ -1.98
TY1A-PR1P0CX58 MOT1YPL082C 5604 nt2.66□□□□□ -1.98
TY1A-PR1P0CX58 RIF1YBR275C 5751 nt2.66□□□□□ -1.98
TY1A-PR1P0CX58 ASE1YOR058C 2658 nt2.65□□□□□ -1.98
TY1A-PR1P0CX58 SEY1YOR165W 2331 nt2.65□□□□□ -1.98
TY1A-PR1P0CX58 TRS130YMR218C 3309 nt2.65□□□□□ -1.99
TY1A-PR1P0CX58 ORC3YLL004W 1851 nt2.65□□□□□ -1.99
TY1A-PR1P0CX58 snR75snR75 89 nt2.64□□□□□ -1.99
TY1A-PR1P0CX58 YLR286W-AYLR286W-A 135 nt2.64□□□□□ -1.99
TY1A-PR1P0CX58 SRB8YCR081W 4284 nt2.64□□□□□ -1.99
TY1A-PR1P0CX58 SVL3YPL032C 2478 nt2.64□□□□□ -1.99
TY1A-PR1P0CX58 COP1YDL145C 3606 nt2.63□□□□□ -1.99
TY1A-PR1P0CX58 UFD4YKL010C 4452 nt2.62□□□□□ -1.99
TY1A-PR1P0CX58 MYO2YOR326W 4725 nt2.62□□□□□ -1.99
TY1A-PR1P0CX58 YKL096C-BYKL096C-B 150 nt2.62□□□□□ -1.99
TY1A-PR1P0CX58 SEC7YDR170C 6030 nt2.62□□□□□ -1.99
TY1A-PR1P0CX58 DYN1YKR054C 12279 nt2.62□□□□□ -1.99
TY1A-PR1P0CX58 TIM9YEL020W-A 264 nt2.61□□□□□ -1.99
TY1A-PR1P0CX58 TRL1YJL087C 2484 nt2.61□□□□□ -1.99
TY1A-PR1P0CX58 YLR041WYLR041W 321 nt2.6□□□□□ -1.99
TY1A-PR1P0CX58 TCB2YNL087W 3537 nt2.6□□□□□ -1.99
TY1A-PR1P0CX58 ILS1YBL076C 3219 nt2.59□□□□□ -1.99
TY1A-PR1P0CX58 SAP1YER047C 2694 nt2.59□□□□□ -1.99
TY1A-PR1P0CX58 YHR086W-AYHR086W-A 162 nt2.59□□□□□ -1.99
TY1A-PR1P0CX58 SYH1YPL105C 2550 nt2.59□□□□□ -1.99
TY1A-PR1P0CX58 RPM2YML091C 3609 nt2.59□□□□□ -2
TY1A-PR1P0CX58 TOF1YNL273W 3717 nt2.59□□□□□ -2
TY1A-PR1P0CX58 YPR097WYPR097W 3222 nt2.59□□□□□ -2
TY1A-PR1P0CX58 SEC10YLR166C 2616 nt2.58□□□□□ -2
TY1A-PR1P0CX58 ALY2YJL084C 3141 nt2.58□□□□□ -2
TY1A-PR1P0CX58 GYP5YPL249C 2685 nt2.57□□□□□ -2
TY1A-PR1P0CX58 tQ(UUG)BtQ(UUG)B 72 nt2.57□□□□□ -2
TY1A-PR1P0CX58 SPO14YKR031C 5052 nt2.57□□□□□ -2
TY1A-PR1P0CX58 TOM1YDR457W 9807 nt2.57□□□□□ -2
TY1A-PR1P0CX58 YBR200W-AYBR200W-A 165 nt2.56□□□□□ -2
TY1A-PR1P0CX58 UBR1YGR184C 5853 nt2.56□□□□□ -2
TY1A-PR1P0CX58 STE6YKL209C 3873 nt2.55□□□□□ -2
TY1A-PR1P0CX58 BNR1YIL159W 4128 nt2.55□□□□□ -2
TY1A-PR1P0CX58 LCL1YPL056C 306 nt2.55□□□□□ -2
TY1A-PR1P0CX58 SPO24YPR036W-A 204 nt2.55□□□□□ -2
TY1A-PR1P0CX58 PRP8YHR165C 7242 nt2.55□□□□□ -2
TY1A-PR1P0CX58 PAN2YGL094C 3348 nt2.55□□□□□ -2
TY1A-PR1P0CX58 SFB2YNL049C 2631 nt2.55□□□□□ -2
TY1A-PR1P0CX58 NUP157YER105C 4176 nt2.54□□□□□ -2
TY1A-PR1P0CX58 YOR343W-BYOR343W-B 5313 nt2.54□□□□□ -2
TY1A-PR1P0CX58 ECM29YHL030W 5607 nt2.54□□□□□ -2
TY1A-PR1P0CX58 MMS4YBR098W 2076 nt2.53□□□□□ -2
TY1A-PR1P0CX58 NOP9YJL010C 2001 nt2.53□□□□□ -2
TY1A-PR1P0CX58 RAD9YDR217C 3930 nt2.53□□□□□ -2
TY1A-PR1P0CX58 RPS29AYLR388W 171 nt2.53□□□□□ -2
TY1A-PR1P0CX58 PDR3YBL005W 2931 nt2.53□□□□□ -2
TY1A-PR1P0CX58 SSD1YDR293C 3753 nt2.52□□□□□ -2.01
TY1A-PR1P0CX58 CHC1YGL206C 4962 nt2.52□□□□□ -2.01
TY1A-PR1P0CX58 YKL225WYKL225W 348 nt2.51□□□□□ -2.01
TY1A-PR1P0CX58 CHS1YNL192W 3396 nt2.5□□□□□ -2.01
TY1A-PR1P0CX58 YDR209CYDR209C 414 nt2.49□□□□□ -2.01
TY1A-PR1P0CX58 GIP3YPL137C 3831 nt2.48□□□□□ -2.01
TY1A-PR1P0CX58 YLR149C-AYLR149C-A 87 nt2.48□□□□□ -2.01
TY1A-PR1P0CX58 RGA1YOR127W 3024 nt2.48□□□□□ -2.01
TY1A-PR1P0CX58 FAR11YNL127W 2862 nt2.47□□□□□ -2.01
TY1A-PR1P0CX58 RPL26BYGR034W 384 nt2.47□□□□□ -2.01
TY1A-PR1P0CX58 snR190snR190 190 nt2.47□□□□□ -2.01
TY1A-PR1P0CX58 BPT1YLL015W 4680 nt2.47□□□□□ -2.01
TY1A-PR1P0CX58 NAB6YML117W 3405 nt2.46□□□□□ -2.01
TY1A-PR1P0CX58 GEA1YJR031C 4227 nt2.46□□□□□ -2.02
TY1A-PR1P0CX58 UTP21YLR409C 2820 nt2.46□□□□□ -2.02
TY1A-PR1P0CX58 YAR009CYAR009C 3591 nt2.46□□□□□ -2.02
TY1A-PR1P0CX58 CYR1YJL005W 6081 nt2.45□□□□□ -2.02
TY1A-PR1P0CX58 NUT1YGL151W 3399 nt2.45□□□□□ -2.02
TY1A-PR1P0CX58 ROM2YLR371W 4071 nt2.45□□□□□ -2.02
TY1A-PR1P0CX58 WAR1YML076C 2835 nt2.45□□□□□ -2.02
TY1A-PR1P0CX58 RTT101YJL047C 2529 nt2.44□□□□□ -2.02
Retrieved 100 of 7,029 protein–RNA pairs in 57 ms