Protein–RNA interactions for Protein: Q07807

PUF3, mRNA-binding protein PUF3, yeastyeast

Known RBP RIP-Chip data

Length 879 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
PUF3Q07807 PRP6YBR055C 2700 nt2.71□□□□□ -1.98
PUF3Q07807 YKU80YMR106C 1890 nt2.71□□□□□ -1.98
PUF3Q07807 SKP2YNL311C 2292 nt2.71□□□□□ -1.98
PUF3Q07807 SWI5YDR146C 2130 nt2.71□□□□□ -1.98
PUF3Q07807 SSN2YDR443C 4263 nt2.71□□□□□ -1.98
PUF3Q07807 PBY1YBR094W 2262 nt2.71□□□□□ -1.98
PUF3Q07807 SUL1YBR294W 2580 nt2.7□□□□□ -1.98
PUF3Q07807 SCH9YHR205W 2475 nt2.7□□□□□ -1.98
PUF3Q07807 SMY2YBR172C 2223 nt2.69□□□□□ -1.98
PUF3Q07807 YBT1YLL048C 4986 nt2.69□□□□□ -1.98 RIP-Chip
PUF3Q07807 tS(GCU)Q1tS(GCU)Q1 86 nt2.69□□□□□ -1.98
PUF3Q07807 snR45snR45 172 nt2.69□□□□□ -1.98
PUF3Q07807 LYS14YDR034C 2373 nt2.69□□□□□ -1.98
PUF3Q07807 SLH1YGR271W 5904 nt2.69□□□□□ -1.98
PUF3Q07807 SOM1YEL059C-A 225 nt2.68□□□□□ -1.98
PUF3Q07807 NUM1YDR150W 8247 nt2.68□□□□□ -1.98
PUF3Q07807 ISW1YBR245C 3390 nt2.68□□□□□ -1.98
PUF3Q07807 TAE2YPL009C 3117 nt2.68□□□□□ -1.98
PUF3Q07807 PUT3YKL015W 2940 nt2.68□□□□□ -1.98 RIP-Chip
PUF3Q07807 STB4YMR019W 2850 nt2.67□□□□□ -1.98 RIP-Chip
PUF3Q07807 KAP123YER110C 3342 nt2.67□□□□□ -1.98
PUF3Q07807 IRR1YIL026C 3453 nt2.67□□□□□ -1.98
PUF3Q07807 YIL134C-AYIL134C-A 204 nt2.67□□□□□ -1.98
PUF3Q07807 MNL2YLR057W 2550 nt2.67□□□□□ -1.98
PUF3Q07807 MRD1YPR112C 2664 nt2.66□□□□□ -1.98
PUF3Q07807 ARP8YOR141C 2646 nt2.66□□□□□ -1.98
PUF3Q07807 PIP2YOR363C 2991 nt2.66□□□□□ -1.98
PUF3Q07807 YDL118WYDL118W 381 nt2.66□□□□□ -1.98
PUF3Q07807 FKS3YMR306W 5358 nt2.66□□□□□ -1.98
PUF3Q07807 YFR016CYFR016C 3702 nt2.66□□□□□ -1.98
PUF3Q07807 RPL31AYDL075W 342 nt2.65□□□□□ -1.99
PUF3Q07807 tW(CCA)G1tW(CCA)G1 72 nt2.65□□□□□ -1.99
PUF3Q07807 tW(CCA)G2tW(CCA)G2 72 nt2.65□□□□□ -1.99
PUF3Q07807 tW(CCA)JtW(CCA)J 72 nt2.65□□□□□ -1.99
PUF3Q07807 tW(CCA)KtW(CCA)K 72 nt2.65□□□□□ -1.99
PUF3Q07807 tW(CCA)MtW(CCA)M 72 nt2.65□□□□□ -1.99
PUF3Q07807 tW(CCA)PtW(CCA)P 72 nt2.65□□□□□ -1.99
PUF3Q07807 LCL1YPL056C 306 nt2.65□□□□□ -1.99
PUF3Q07807 SPO22YIL073C 2928 nt2.65□□□□□ -1.99
PUF3Q07807 YAL042C-AYAL042C-A 378 nt2.64□□□□□ -1.99
PUF3Q07807 SDC25YLL016W 3147 nt2.64□□□□□ -1.99
PUF3Q07807 TOP2YNL088W 4287 nt2.64□□□□□ -1.99
PUF3Q07807 EDS1YBR033W 2760 nt2.64□□□□□ -1.99
PUF3Q07807 SGM1YJR134C 2124 nt2.63□□□□□ -1.99
PUF3Q07807 YOR019WYOR019W 2193 nt2.63□□□□□ -1.99
PUF3Q07807 CRM1YGR218W 3255 nt2.63□□□□□ -1.99
PUF3Q07807 CRS5YOR031W 210 nt2.63□□□□□ -1.99
PUF3Q07807 YOR055WYOR055W 435 nt2.63□□□□□ -1.99
PUF3Q07807 HOS4YIL112W 3252 nt2.63□□□□□ -1.99
PUF3Q07807 YBL005W-BYBL005W-B 5268 nt2.63□□□□□ -1.99
PUF3Q07807 AFI1YOR129C 2682 nt2.63□□□□□ -1.99
PUF3Q07807 STF2YGR008C 255 nt2.62□□□□□ -1.99
PUF3Q07807 PAU8YAL068C 363 nt2.62□□□□□ -1.99
PUF3Q07807 PAU18YLL064C 363 nt2.62□□□□□ -1.99
PUF3Q07807 PAU6YNR076W 363 nt2.62□□□□□ -1.99
PUF3Q07807 PAU20YOL161C 363 nt2.62□□□□□ -1.99
PUF3Q07807 SLN1YIL147C 3663 nt2.62□□□□□ -1.99
PUF3Q07807 RGA2YDR379W 3030 nt2.62□□□□□ -1.99
PUF3Q07807 RPS30BYOR182C 192 nt2.61□□□□□ -1.99
PUF3Q07807 VPS13YLL040C 9435 nt2.61□□□□□ -1.99
PUF3Q07807 SLD3YGL113W 2007 nt2.61□□□□□ -1.99
PUF3Q07807 RAD34YDR314C 2079 nt2.61□□□□□ -1.99
PUF3Q07807 VMR1YHL035C 4779 nt2.6□□□□□ -1.99
PUF3Q07807 YCR038W-AYCR038W-A 126 nt2.6□□□□□ -1.99
PUF3Q07807 SNC1YAL030W 354 nt2.6□□□□□ -1.99
PUF3Q07807 PDR3YBL005W 2931 nt2.6□□□□□ -1.99
PUF3Q07807 SBE22YHR103W 2559 nt2.59□□□□□ -1.99
PUF3Q07807 YDR186CYDR186C 2634 nt2.59□□□□□ -1.99
PUF3Q07807 BNR1YIL159W 4128 nt2.59□□□□□ -1.99
PUF3Q07807 YNL144CYNL144C 2223 nt2.59□□□□□ -1.99
PUF3Q07807 YMR242W-AYMR242W-A 90 nt2.59□□□□□ -1.99
PUF3Q07807 SLM1YIL105C 2061 nt2.59□□□□□ -2
PUF3Q07807 AMS1YGL156W 3252 nt2.59□□□□□ -2
PUF3Q07807 NAM7YMR080C 2916 nt2.58□□□□□ -2
PUF3Q07807 VPS16YPL045W 2397 nt2.58□□□□□ -2
PUF3Q07807 ZRG8YER033C 3231 nt2.58□□□□□ -2
PUF3Q07807 SWR1YDR334W 4545 nt2.58□□□□□ -2
PUF3Q07807 ZIP2YGL249W 2115 nt2.57□□□□□ -2
PUF3Q07807 SET2YJL168C 2202 nt2.57□□□□□ -2 RIP-Chip
PUF3Q07807 NEW1YPL226W 3591 nt2.57□□□□□ -2
PUF3Q07807 PHO91YNR013C 2685 nt2.56□□□□□ -2
PUF3Q07807 CAT2YML042W 2013 nt2.56□□□□□ -2
PUF3Q07807 YCR087C-AYCR087C-A 462 nt2.56□□□□□ -2
PUF3Q07807 YIL156W-BYIL156W-B 222 nt2.56□□□□□ -2
PUF3Q07807 CHS6YJL099W 2241 nt2.56□□□□□ -2
PUF3Q07807 COX12YLR038C 252 nt2.55□□□□□ -2
PUF3Q07807 SMC6YLR383W 3345 nt2.55□□□□□ -2
PUF3Q07807 RRP6YOR001W 2202 nt2.55□□□□□ -2
PUF3Q07807 YOR108C-AYOR108C-A 210 nt2.55□□□□□ -2
PUF3Q07807 YOR394C-AYOR394C-A 168 nt2.55□□□□□ -2
PUF3Q07807 ATG11YPR049C 3537 nt2.55□□□□□ -2
PUF3Q07807 PRP5YBR237W 2550 nt2.55□□□□□ -2
PUF3Q07807 PDR11YIL013C 4236 nt2.55□□□□□ -2
PUF3Q07807 MGM1YOR211C 2646 nt2.55□□□□□ -2
PUF3Q07807 SVL3YPL032C 2478 nt2.54□□□□□ -2
PUF3Q07807 PSD2YGR170W 3417 nt2.54□□□□□ -2
PUF3Q07807 snR70snR70 164 nt2.54□□□□□ -2
PUF3Q07807 ACB1YGR037C 264 nt2.54□□□□□ -2
PUF3Q07807 STE11YLR362W 2154 nt2.54□□□□□ -2
PUF3Q07807 SCD5YOR329C 2619 nt2.54□□□□□ -2
Retrieved 100 of 7,029 protein–RNA pairs in 47.4 ms