Protein–RNA interactions for Protein: P53617

NRD1, Protein NRD1, yeastyeast

Known RBP RIP-Chip data

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
NRD1P53617 RSE1YML049C 4086 nt2.71□□□□□ -1.98
NRD1P53617 MMS4YBR098W 2076 nt2.71□□□□□ -1.98
NRD1P53617 SBE22YHR103W 2559 nt2.7□□□□□ -1.98
NRD1P53617 YDL159W-AYDL159W-A 132 nt2.7□□□□□ -1.98 RIP-Chip
NRD1P53617 SET2YJL168C 2202 nt2.7□□□□□ -1.98
NRD1P53617 SEC7YDR170C 6030 nt2.7□□□□□ -1.98
NRD1P53617 MOT1YPL082C 5604 nt2.7□□□□□ -1.98
NRD1P53617 CYR1YJL005W 6081 nt2.7□□□□□ -1.98
NRD1P53617 RTT107YHR154W 3213 nt2.7□□□□□ -1.98
NRD1P53617 YDR354C-AYDR354C-A 144 nt2.69□□□□□ -1.98
NRD1P53617 tW(CCA)G1tW(CCA)G1 72 nt2.69□□□□□ -1.98
NRD1P53617 tW(CCA)G2tW(CCA)G2 72 nt2.69□□□□□ -1.98
NRD1P53617 tW(CCA)JtW(CCA)J 72 nt2.69□□□□□ -1.98
NRD1P53617 tW(CCA)KtW(CCA)K 72 nt2.69□□□□□ -1.98
NRD1P53617 tW(CCA)MtW(CCA)M 72 nt2.69□□□□□ -1.98
NRD1P53617 tW(CCA)PtW(CCA)P 72 nt2.69□□□□□ -1.98
NRD1P53617 ECM29YHL030W 5607 nt2.69□□□□□ -1.98
NRD1P53617 MET5YJR137C 4329 nt2.68□□□□□ -1.98
NRD1P53617 YDR034C-DYDR034C-D 5313 nt2.68□□□□□ -1.98
NRD1P53617 INP52YNL106C 3552 nt2.67□□□□□ -1.98
NRD1P53617 SEC1YDR164C 2175 nt2.67□□□□□ -1.98 RIP-Chip
NRD1P53617 TCB2YNL087W 3537 nt2.67□□□□□ -1.98
NRD1P53617 VAS1YGR094W 3315 nt2.67□□□□□ -1.98
NRD1P53617 SWI5YDR146C 2130 nt2.67□□□□□ -1.98
NRD1P53617 YKL225WYKL225W 348 nt2.67□□□□□ -1.98
NRD1P53617 KAP120YPL125W 3099 nt2.67□□□□□ -1.98
NRD1P53617 IKI3YLR384C 4050 nt2.67□□□□□ -1.98
NRD1P53617 YDR098C-BYDR098C-B 5268 nt2.66□□□□□ -1.98
NRD1P53617 YDR210C-DYDR210C-D 5268 nt2.66□□□□□ -1.98
NRD1P53617 YDR316W-BYDR316W-B 5268 nt2.66□□□□□ -1.98
NRD1P53617 YDR365W-BYDR365W-B 5268 nt2.66□□□□□ -1.98
NRD1P53617 YER138CYER138C 5268 nt2.66□□□□□ -1.98
NRD1P53617 YER160CYER160C 5268 nt2.66□□□□□ -1.98
NRD1P53617 YGR038C-BYGR038C-B 5268 nt2.66□□□□□ -1.98
NRD1P53617 YGR161C-DYGR161C-D 5268 nt2.66□□□□□ -1.98
NRD1P53617 YJR027WYJR027W 5268 nt2.66□□□□□ -1.98
NRD1P53617 YLR157C-BYLR157C-B 5268 nt2.66□□□□□ -1.98
NRD1P53617 YML039WYML039W 5268 nt2.66□□□□□ -1.98
NRD1P53617 YML045WYML045W 5268 nt2.66□□□□□ -1.98
NRD1P53617 YMR050CYMR050C 5268 nt2.66□□□□□ -1.98
NRD1P53617 YOL103W-BYOL103W-B 5268 nt2.66□□□□□ -1.98
NRD1P53617 YBR012W-BYBR012W-B 5271 nt2.66□□□□□ -1.98
NRD1P53617 YOR142W-BYOR142W-B 5268 nt2.66□□□□□ -1.98
NRD1P53617 YPL257W-BYPL257W-B 5268 nt2.66□□□□□ -1.98
NRD1P53617 YPR158W-BYPR158W-B 5271 nt2.66□□□□□ -1.98
NRD1P53617 ENA5YDR038C 3276 nt2.66□□□□□ -1.98
NRD1P53617 SLH1YGR271W 5904 nt2.66□□□□□ -1.98
NRD1P53617 YLR154C-HYLR154C-H 132 nt2.66□□□□□ -1.98
NRD1P53617 YLR156C-AYLR156C-A 132 nt2.66□□□□□ -1.98
NRD1P53617 YLR157C-CYLR157C-C 132 nt2.66□□□□□ -1.98
NRD1P53617 YLR159C-AYLR159C-A 132 nt2.66□□□□□ -1.98
NRD1P53617 YBL039C-AYBL039C-A 84 nt2.66□□□□□ -1.98
NRD1P53617 CRM1YGR218W 3255 nt2.66□□□□□ -1.98
NRD1P53617 SEF1YBL066C 3447 nt2.66□□□□□ -1.98
NRD1P53617 LHS1YKL073W 2646 nt2.66□□□□□ -1.98
NRD1P53617 RPH1YER169W 2391 nt2.65□□□□□ -1.98 RIP-Chip
NRD1P53617 PNC1YGL037C 651 nt2.65□□□□□ -1.99
NRD1P53617 RGM1YMR182C 636 nt2.65□□□□□ -1.99
NRD1P53617 PRP8YHR165C 7242 nt2.65□□□□□ -1.99
NRD1P53617 MPH1YIR002C 2982 nt2.65□□□□□ -1.99
NRD1P53617 YLR278CYLR278C 4026 nt2.65□□□□□ -1.99
NRD1P53617 PUT3YKL015W 2940 nt2.64□□□□□ -1.99
NRD1P53617 VPS35YJL154C 2835 nt2.64□□□□□ -1.99
NRD1P53617 YLL020CYLL020C 306 nt2.64□□□□□ -1.99
NRD1P53617 RRP6YOR001W 2202 nt2.64□□□□□ -1.99
NRD1P53617 APL2YKL135C 2181 nt2.63□□□□□ -1.99
NRD1P53617 YDR210WYDR210W 228 nt2.63□□□□□ -1.99
NRD1P53617 YHR086W-AYHR086W-A 162 nt2.63□□□□□ -1.99
NRD1P53617 SAP1YER047C 2694 nt2.62□□□□□ -1.99
NRD1P53617 UBP11YKR098C 2154 nt2.62□□□□□ -1.99
NRD1P53617 YJL026C-AYJL026C-A 222 nt2.62□□□□□ -1.99
NRD1P53617 YLR041WYLR041W 321 nt2.62□□□□□ -1.99
NRD1P53617 YLR232WYLR232W 348 nt2.62□□□□□ -1.99
NRD1P53617 BCK1YJL095W 4437 nt2.62□□□□□ -1.99
NRD1P53617 TTI1YKL033W 3117 nt2.62□□□□□ -1.99
NRD1P53617 YDR210W-BYDR210W-B 5313 nt2.61□□□□□ -1.99
NRD1P53617 YDR261W-BYDR261W-B 5313 nt2.61□□□□□ -1.99
NRD1P53617 YFL002W-AYFL002W-A 5313 nt2.61□□□□□ -1.99
NRD1P53617 YGR161W-BYGR161W-B 5313 nt2.61□□□□□ -1.99
NRD1P53617 YLR410W-BYLR410W-B 5313 nt2.61□□□□□ -1.99
NRD1P53617 YCL019WYCL019W 5313 nt2.61□□□□□ -1.99
NRD1P53617 YFR016CYFR016C 3702 nt2.61□□□□□ -1.99
NRD1P53617 YIL156W-BYIL156W-B 222 nt2.61□□□□□ -1.99
NRD1P53617 BOI1YBL085W 2943 nt2.61□□□□□ -1.99
NRD1P53617 SAK1YER129W 3429 nt2.61□□□□□ -1.99
NRD1P53617 DNA2YHR164C 4569 nt2.61□□□□□ -1.99
NRD1P53617 PTP3YER075C 2787 nt2.61□□□□□ -1.99
NRD1P53617 tM(CAU)Q2tM(CAU)Q2 78 nt2.6□□□□□ -1.99
NRD1P53617 YHR073W-AYHR073W-A 177 nt2.6□□□□□ -1.99
NRD1P53617 ESC1YMR219W 4977 nt2.6□□□□□ -1.99
NRD1P53617 SRB8YCR081W 4284 nt2.59□□□□□ -1.99
NRD1P53617 SEC26YDR238C 2922 nt2.59□□□□□ -1.99
NRD1P53617 YDL025W-AYDL025W-A 105 nt2.59□□□□□ -1.99
NRD1P53617 YGL014C-AYGL014C-A 162 nt2.59□□□□□ -1.99
NRD1P53617 MLH1YMR167W 2310 nt2.59□□□□□ -2
NRD1P53617 YKU80YMR106C 1890 nt2.58□□□□□ -2
NRD1P53617 PDR1YGL013C 3207 nt2.58□□□□□ -2
NRD1P53617 snR70snR70 164 nt2.58□□□□□ -2
NRD1P53617 YMR31YFR049W 372 nt2.58□□□□□ -2 RIP-Chip
NRD1P53617 ACB1YGR037C 264 nt2.58□□□□□ -2
Retrieved 100 of 7,029 protein–RNA pairs in 63.6 ms