Protein–RNA interactions for Protein: P47023

TY4A-J, Transposon Ty4-J Gag polyprotein, yeastyeast

Predictions only

Length 414 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
TY4A-JP47023 FRK1YPL141C 2598 nt2.29□□□□□ -2.04
TY4A-JP47023 APQ12YIL040W 417 nt2.29□□□□□ -2.04
TY4A-JP47023 YBL012CYBL012C 402 nt2.29□□□□□ -2.04
TY4A-JP47023 YMR321CYMR321C 318 nt2.29□□□□□ -2.04
TY4A-JP47023 YOR225WYOR225W 330 nt2.29□□□□□ -2.04
TY4A-JP47023 CTR9YOL145C 3234 nt2.29□□□□□ -2.04
TY4A-JP47023 TOR2YKL203C 7425 nt2.29□□□□□ -2.04
TY4A-JP47023 YCK3YER123W 1575 nt2.28□□□□□ -2.04
TY4A-JP47023 MSB1YOR188W 3414 nt2.28□□□□□ -2.04
TY4A-JP47023 MDM20YOL076W 2391 nt2.28□□□□□ -2.04
TY4A-JP47023 YDR003W-AYDR003W-A 123 nt2.28□□□□□ -2.04
TY4A-JP47023 ISD11YER048W-A 285 nt2.28□□□□□ -2.04
TY4A-JP47023 YEL014CYEL014C 306 nt2.27□□□□□ -2.05
TY4A-JP47023 TDA9YML081W 3756 nt2.27□□□□□ -2.05
TY4A-JP47023 ZIP2YGL249W 2115 nt2.27□□□□□ -2.05
TY4A-JP47023 DNF1YER166W 4716 nt2.27□□□□□ -2.05
TY4A-JP47023 APL5YPL195W 2799 nt2.26□□□□□ -2.05
TY4A-JP47023 YOL160WYOL160W 342 nt2.26□□□□□ -2.05
TY4A-JP47023 YCL023CYCL023C 348 nt2.26□□□□□ -2.05
TY4A-JP47023 YGL007C-AYGL007C-A 87 nt2.25□□□□□ -2.05
TY4A-JP47023 MLH3YPL164C 2148 nt2.25□□□□□ -2.05
TY4A-JP47023 NEO1YIL048W 3456 nt2.25□□□□□ -2.05
TY4A-JP47023 VTC1YER072W 390 nt2.24□□□□□ -2.05
TY4A-JP47023 RPS27BYHR021C 249 nt2.24□□□□□ -2.05
TY4A-JP47023 VPS55YJR044C 423 nt2.24□□□□□ -2.05
TY4A-JP47023 RRT15YLR162W-A 189 nt2.24□□□□□ -2.05
TY4A-JP47023 YMR242W-AYMR242W-A 90 nt2.24□□□□□ -2.05
TY4A-JP47023 YPR092WYPR092W 306 nt2.24□□□□□ -2.05
TY4A-JP47023 NPR2YEL062W 1848 nt2.24□□□□□ -2.05
TY4A-JP47023 VPS54YDR027C 2670 nt2.24□□□□□ -2.05
TY4A-JP47023 SPP41YDR464W 4308 nt2.23□□□□□ -2.05
TY4A-JP47023 YER088C-AYER088C-A 324 nt2.23□□□□□ -2.05
TY4A-JP47023 INA22YIR024C 651 nt2.23□□□□□ -2.05
TY4A-JP47023 RLM1YPL089C 2031 nt2.23□□□□□ -2.05
TY4A-JP47023 HSH155YMR288W 2916 nt2.23□□□□□ -2.05
TY4A-JP47023 CHC1YGL206C 4962 nt2.22□□□□□ -2.05
TY4A-JP47023 SEC5YDR166C 2916 nt2.22□□□□□ -2.05
TY4A-JP47023 AGC1YPR021C 2709 nt2.22□□□□□ -2.05
TY4A-JP47023 ATP7YKL016C 525 nt2.22□□□□□ -2.05
TY4A-JP47023 YNL198CYNL198C 303 nt2.22□□□□□ -2.05
TY4A-JP47023 SLN1YIL147C 3663 nt2.21□□□□□ -2.06
TY4A-JP47023 YFR016CYFR016C 3702 nt2.21□□□□□ -2.06
TY4A-JP47023 SEC16YPL085W 6588 nt2.21□□□□□ -2.06
TY4A-JP47023 YDL185C-AYDL185C-A 228 nt2.21□□□□□ -2.06
TY4A-JP47023 OLI1Q0130 231 nt2.21□□□□□ -2.06
TY4A-JP47023 MCM10YIL150C 1716 nt2.21□□□□□ -2.06
TY4A-JP47023 YOR011W-AYOR011W-A 207 nt2.21□□□□□ -2.06
TY4A-JP47023 SCD5YOR329C 2619 nt2.21□□□□□ -2.06
TY4A-JP47023 DGR2YKL121W 2559 nt2.2□□□□□ -2.06
TY4A-JP47023 YNL144CYNL144C 2223 nt2.2□□□□□ -2.06
TY4A-JP47023 tF(GAA)QtF(GAA)Q 75 nt2.2□□□□□ -2.06
TY4A-JP47023 RPL34BYIL052C 366 nt2.2□□□□□ -2.06
TY4A-JP47023 PAM16YJL104W 450 nt2.2□□□□□ -2.06
TY4A-JP47023 YOR015WYOR015W 360 nt2.2□□□□□ -2.06
TY4A-JP47023 KOG1YHR186C 4674 nt2.19□□□□□ -2.06
TY4A-JP47023 YIR044CYIR044C 186 nt2.19□□□□□ -2.06
TY4A-JP47023 YJL182CYJL182C 318 nt2.19□□□□□ -2.06
TY4A-JP47023 SEY1YOR165W 2331 nt2.19□□□□□ -2.06
TY4A-JP47023 SGS1YMR190C 4344 nt2.19□□□□□ -2.06
TY4A-JP47023 YJR039WYJR039W 3366 nt2.19□□□□□ -2.06
TY4A-JP47023 GCN2YDR283C 4980 nt2.19□□□□□ -2.06
TY4A-JP47023 YOR343W-BYOR343W-B 5313 nt2.19□□□□□ -2.06
TY4A-JP47023 SEC63YOR254C 1992 nt2.18□□□□□ -2.06
TY4A-JP47023 SPC98YNL126W 2541 nt2.18□□□□□ -2.06
TY4A-JP47023 NIP100YPL174C 2607 nt2.18□□□□□ -2.06
TY4A-JP47023 YGR151CYGR151C 336 nt2.18□□□□□ -2.06
TY4A-JP47023 YBR182C-AYBR182C-A 195 nt2.18□□□□□ -2.06
TY4A-JP47023 ADR1YDR216W 3972 nt2.18□□□□□ -2.06
TY4A-JP47023 CUL3YGR003W 2235 nt2.18□□□□□ -2.06
TY4A-JP47023 MAD1YGL086W 2250 nt2.17□□□□□ -2.06
TY4A-JP47023 PKH3YDR466W 2697 nt2.17□□□□□ -2.06
TY4A-JP47023 YMR045CYMR045C 5268 nt2.17□□□□□ -2.06
TY4A-JP47023 YDL118WYDL118W 381 nt2.17□□□□□ -2.06
TY4A-JP47023 MYO4YAL029C 4416 nt2.17□□□□□ -2.06
TY4A-JP47023 YOR302WYOR302W 78 nt2.16□□□□□ -2.06
TY4A-JP47023 MPT5YGL178W 2580 nt2.16□□□□□ -2.06
TY4A-JP47023 MSH5YDL154W 2706 nt2.16□□□□□ -2.06
TY4A-JP47023 MSH6YDR097C 3729 nt2.16□□□□□ -2.06
TY4A-JP47023 PTP2YOR208W 2253 nt2.15□□□□□ -2.06
TY4A-JP47023 YKU70YMR284W 1809 nt2.15□□□□□ -2.06
TY4A-JP47023 APL2YKL135C 2181 nt2.15□□□□□ -2.07
TY4A-JP47023 RAD34YDR314C 2079 nt2.15□□□□□ -2.07
TY4A-JP47023 YLR294CYLR294C 330 nt2.15□□□□□ -2.07
TY4A-JP47023 YLR466C-BYLR466C-B 117 nt2.15□□□□□ -2.07
TY4A-JP47023 YLL007CYLL007C 1998 nt2.15□□□□□ -2.07
TY4A-JP47023 PAU3YCR104W 375 nt2.14□□□□□ -2.07
TY4A-JP47023 AI5_ALPHAQ0070 1893 nt2.14□□□□□ -2.07
TY4A-JP47023 TFC3YAL001C 3483 nt2.13□□□□□ -2.07
TY4A-JP47023 YOR072W-BYOR072W-B 162 nt2.13□□□□□ -2.07
TY4A-JP47023 TBS1YBR150C 3285 nt2.13□□□□□ -2.07
TY4A-JP47023 PIG1YLR273C 1947 nt2.13□□□□□ -2.07
TY4A-JP47023 RPS25BYLR333C 327 nt2.12□□□□□ -2.07
TY4A-JP47023 HSL1YKL101W 4557 nt2.11□□□□□ -2.07
TY4A-JP47023 ULI1YFR026C 510 nt2.1□□□□□ -2.07
TY4A-JP47023 YOR376WYOR376W 369 nt2.1□□□□□ -2.07
TY4A-JP47023 tT(UGU)HtT(UGU)H 72 nt2.09□□□□□ -2.07
TY4A-JP47023 SGF11YPL047W 300 nt2.09□□□□□ -2.07
TY4A-JP47023 SAP190YKR028W 3102 nt2.08□□□□□ -2.08
TY4A-JP47023 ENV11YGR071C 2583 nt2.08□□□□□ -2.08
TY4A-JP47023 YJL052C-AYJL052C-A 120 nt2.08□□□□□ -2.08
Retrieved 100 of 7,029 protein–RNA pairs in 13.6 ms