Protein–RNA interactions for Protein: P46948

SKI6, Exosome complex component SKI6, yeastyeast

Predicted RBP Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SKI6P46948 SNU56YDR240C 1479 nt0.46□□□□□ -2.34
SKI6P46948 YJR003CYJR003C 1560 nt0.45□□□□□ -2.34
SKI6P46948 APQ13YJL075C 417 nt0.45□□□□□ -2.34
SKI6P46948 EFR3YMR212C 2349 nt0.44□□□□□ -2.34
SKI6P46948 PAC1YOR269W 1485 nt0.44□□□□□ -2.34
SKI6P46948 GPG1YGL121C 381 nt0.44□□□□□ -2.34
SKI6P46948 YLL007CYLL007C 1998 nt0.44□□□□□ -2.34
SKI6P46948 LTE1YAL024C 4308 nt0.44□□□□□ -2.34
SKI6P46948 YDL016CYDL016C 303 nt0.43□□□□□ -2.34
SKI6P46948 YDR521WYDR521W 336 nt0.43□□□□□ -2.34
SKI6P46948 PRE4YFR050C 801 nt0.43□□□□□ -2.34
SKI6P46948 RPL9AYGL147C 576 nt0.42□□□□□ -2.34
SKI6P46948 YDR029WYDR029W 315 nt0.41□□□□□ -2.34
SKI6P46948 URM1YIL008W 300 nt0.41□□□□□ -2.34
SKI6P46948 YIL066W-AYIL066W-A 444 nt0.41□□□□□ -2.34
SKI6P46948 RPS27AYKL156W 249 nt0.41□□□□□ -2.34
SKI6P46948 YMR141W-AYMR141W-A 225 nt0.41□□□□□ -2.34
SKI6P46948 CMC4YMR194C-B 222 nt0.41□□□□□ -2.34
SKI6P46948 YOR282WYOR282W 321 nt0.41□□□□□ -2.34
SKI6P46948 PKH2YOL100W 3246 nt0.41□□□□□ -2.34
SKI6P46948 YDR344CYDR344C 444 nt0.4□□□□□ -2.35
SKI6P46948 YHR052W-AYHR052W-A 195 nt0.4□□□□□ -2.35
SKI6P46948 YHR054W-AYHR054W-A 195 nt0.4□□□□□ -2.35
SKI6P46948 YJL135WYJL135W 318 nt0.4□□□□□ -2.35
SKI6P46948 YOR108C-AYOR108C-A 210 nt0.4□□□□□ -2.35
SKI6P46948 RPB10YOR210W 213 nt0.4□□□□□ -2.35
SKI6P46948 LOA1YPR139C 903 nt0.39□□□□□ -2.35
SKI6P46948 NPR2YEL062W 1848 nt0.38□□□□□ -2.35
SKI6P46948 HMLALPHA2YCL067C 633 nt0.38□□□□□ -2.35
SKI6P46948 MATALPHA2YCR039C 633 nt0.38□□□□□ -2.35
SKI6P46948 CHS6YJL099W 2241 nt0.37□□□□□ -2.35
SKI6P46948 YDL032WYDL032W 312 nt0.37□□□□□ -2.35
SKI6P46948 YFL012WYFL012W 447 nt0.37□□□□□ -2.35
SKI6P46948 CDC33YOL139C 642 nt0.37□□□□□ -2.35
SKI6P46948 YPL182CYPL182C 384 nt0.37□□□□□ -2.35
SKI6P46948 PAN2YGL094C 3348 nt0.36□□□□□ -2.35
SKI6P46948 YMR290W-AYMR290W-A 348 nt0.36□□□□□ -2.35
SKI6P46948 YNL319WYNL319W 441 nt0.36□□□□□ -2.35
SKI6P46948 YHL042WYHL042W 453 nt0.35□□□□□ -2.35
SKI6P46948 PRP16YKR086W 3216 nt0.34□□□□□ -2.35
SKI6P46948 PMP1YCR024C-A 123 nt0.34□□□□□ -2.36
SKI6P46948 snR72snR72 98 nt0.34□□□□□ -2.36
SKI6P46948 tT(AGU)BtT(AGU)B 73 nt0.34□□□□□ -2.36
SKI6P46948 tT(AGU)CtT(AGU)C 73 nt0.34□□□□□ -2.36
SKI6P46948 tT(AGU)DtT(AGU)D 73 nt0.34□□□□□ -2.36
SKI6P46948 tT(AGU)HtT(AGU)H 73 nt0.34□□□□□ -2.36
SKI6P46948 tT(AGU)I1tT(AGU)I1 73 nt0.34□□□□□ -2.36
SKI6P46948 tT(AGU)I2tT(AGU)I2 73 nt0.34□□□□□ -2.36
SKI6P46948 tT(AGU)JtT(AGU)J 73 nt0.34□□□□□ -2.36
SKI6P46948 tT(AGU)N1tT(AGU)N1 73 nt0.34□□□□□ -2.36
SKI6P46948 tT(AGU)N2tT(AGU)N2 73 nt0.34□□□□□ -2.36
SKI6P46948 tT(AGU)O1tT(AGU)O1 73 nt0.34□□□□□ -2.36
SKI6P46948 tT(AGU)O2tT(AGU)O2 73 nt0.34□□□□□ -2.36
SKI6P46948 RPS24BYIL069C 408 nt0.34□□□□□ -2.36
SKI6P46948 NOP9YJL010C 2001 nt0.34□□□□□ -2.36
SKI6P46948 GPI15YNL038W 690 nt0.34□□□□□ -2.36
SKI6P46948 YOL160WYOL160W 342 nt0.34□□□□□ -2.36
SKI6P46948 RPL26BYGR034W 384 nt0.33□□□□□ -2.36
SKI6P46948 TIM13YGR181W 318 nt0.33□□□□□ -2.36
SKI6P46948 RTT102YGR275W 474 nt0.33□□□□□ -2.36
SKI6P46948 BIG1YHR101C 1008 nt0.33□□□□□ -2.36
SKI6P46948 YKL202WYKL202W 582 nt0.33□□□□□ -2.36
SKI6P46948 YLR269CYLR269C 351 nt0.33□□□□□ -2.36
SKI6P46948 YBL008W-AYBL008W-A 240 nt0.33□□□□□ -2.36
SKI6P46948 YCR001WYCR001W 315 nt0.32□□□□□ -2.36
SKI6P46948 RPF1YHR088W 888 nt0.32□□□□□ -2.36
SKI6P46948 YIL134C-AYIL134C-A 204 nt0.32□□□□□ -2.36
SKI6P46948 PAM16YJL104W 450 nt0.32□□□□□ -2.36
SKI6P46948 YER087C-AYER087C-A 552 nt0.31□□□□□ -2.36
SKI6P46948 NFU1YKL040C 771 nt0.31□□□□□ -2.36
SKI6P46948 YKL123WYKL123W 381 nt0.31□□□□□ -2.36
SKI6P46948 RAD34YDR314C 2079 nt0.3□□□□□ -2.36
SKI6P46948 EMC4YGL231C 573 nt0.3□□□□□ -2.36
SKI6P46948 tR(UCU)Q1tR(UCU)Q1 73 nt0.3□□□□□ -2.36
SKI6P46948 UBC7YMR022W 498 nt0.3□□□□□ -2.36
SKI6P46948 YBR076C-AYBR076C-A 267 nt0.3□□□□□ -2.36
SKI6P46948 snR51snR51 107 nt0.29□□□□□ -2.36
SKI6P46948 CUL3YGR003W 2235 nt0.28□□□□□ -2.36
SKI6P46948 WIP1YDR374W-A 270 nt0.28□□□□□ -2.36
SKI6P46948 BSC3YLR465C 309 nt0.28□□□□□ -2.36
SKI6P46948 YOR218CYOR218C 420 nt0.28□□□□□ -2.36
SKI6P46948 YBR064WYBR064W 429 nt0.28□□□□□ -2.36
SKI6P46948 UBP3YER151C 2739 nt0.28□□□□□ -2.37
SKI6P46948 YCK3YER123W 1575 nt0.28□□□□□ -2.37
SKI6P46948 YPL044CYPL044C 549 nt0.27□□□□□ -2.37
SKI6P46948 YPL261CYPL261C 309 nt0.27□□□□□ -2.37
SKI6P46948 MCM10YIL150C 1716 nt0.27□□□□□ -2.37
SKI6P46948 YEL030C-AYEL030C-A 315 nt0.26□□□□□ -2.37
SKI6P46948 SBH1YER087C-B 249 nt0.26□□□□□ -2.37
SKI6P46948 YBL071CYBL071C 309 nt0.26□□□□□ -2.37
SKI6P46948 snR78snR78 87 nt0.25□□□□□ -2.37
SKI6P46948 OLI1Q0130 231 nt0.25□□□□□ -2.37
SKI6P46948 RPL26AYLR344W 384 nt0.25□□□□□ -2.37
SKI6P46948 PBI2YNL015W 228 nt0.25□□□□□ -2.37
SKI6P46948 SDH7YDR511W 402 nt0.24□□□□□ -2.37
SKI6P46948 YIL142C-AYIL142C-A 333 nt0.24□□□□□ -2.37
SKI6P46948 YJL020W-AYJL020W-A 258 nt0.24□□□□□ -2.37
SKI6P46948 YJL127W-AYJL127W-A 117 nt0.24□□□□□ -2.37
SKI6P46948 ABF2YMR072W 552 nt0.24□□□□□ -2.37
SKI6P46948 INP2YMR163C 2118 nt0.24□□□□□ -2.37
Retrieved 100 of 7,029 protein–RNA pairs in 107.9 ms