Protein–RNA interactions for Protein: P41806

VMA21, Vacuolar ATPase assembly integral membrane protein VMA21, yeastyeast

Predictions only

Length 77 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
VMA21P41806 snR45snR45 172 nt-0.34□□□□□ -2.46
VMA21P41806 INP2YMR163C 2118 nt-0.35□□□□□ -2.47
VMA21P41806 YPL044CYPL044C 549 nt-0.35□□□□□ -2.47
VMA21P41806 YPL119C-AYPL119C-A 264 nt-0.35□□□□□ -2.47
VMA21P41806 YER076W-AYER076W-A 348 nt-0.36□□□□□ -2.47
VMA21P41806 YOR364WYOR364W 369 nt-0.36□□□□□ -2.47
VMA21P41806 YDR371C-AYDR371C-A 105 nt-0.37□□□□□ -2.47
VMA21P41806 YER138W-AYER138W-A 105 nt-0.37□□□□□ -2.47
VMA21P41806 COX3Q0275 810 nt-0.37□□□□□ -2.47
VMA21P41806 YJR079WYJR079W 330 nt-0.37□□□□□ -2.47
VMA21P41806 ACF4YJR083C 930 nt-0.37□□□□□ -2.47
VMA21P41806 YOL106WYOL106W 354 nt-0.37□□□□□ -2.47
VMA21P41806 ASE1YOR058C 2658 nt-0.38□□□□□ -2.47
VMA21P41806 YHR050W-AYHR050W-A 171 nt-0.38□□□□□ -2.47
VMA21P41806 YLR146W-AYLR146W-A 189 nt-0.38□□□□□ -2.47
VMA21P41806 LEE1YPL054W 906 nt-0.38□□□□□ -2.47
VMA21P41806 RFX1YLR176C 2436 nt-0.38□□□□□ -2.47
VMA21P41806 OST4YDL232W 111 nt-0.39□□□□□ -2.47
VMA21P41806 YMR304C-AYMR304C-A 351 nt-0.39□□□□□ -2.47
VMA21P41806 BI4Q0120 1917 nt-0.39□□□□□ -2.47
VMA21P41806 SOV1YMR066W 2697 nt-0.39□□□□□ -2.47
VMA21P41806 CUL3YGR003W 2235 nt-0.4□□□□□ -2.47
VMA21P41806 MCM10YIL150C 1716 nt-0.4□□□□□ -2.47
VMA21P41806 YNL050CYNL050C 813 nt-0.4□□□□□ -2.47
VMA21P41806 THO2YNL139C 4794 nt-0.4□□□□□ -2.47
VMA21P41806 TDA2YER071C 381 nt-0.41□□□□□ -2.48
VMA21P41806 RPS26AYGL189C 360 nt-0.41□□□□□ -2.48
VMA21P41806 LRP1YHR081W 555 nt-0.41□□□□□ -2.48
VMA21P41806 YMR141W-AYMR141W-A 225 nt-0.42□□□□□ -2.48
VMA21P41806 YMR321CYMR321C 318 nt-0.42□□□□□ -2.48
VMA21P41806 YNL150WYNL150W 408 nt-0.42□□□□□ -2.48
VMA21P41806 YBR064WYBR064W 429 nt-0.42□□□□□ -2.48
VMA21P41806 ZIP2YGL249W 2115 nt-0.43□□□□□ -2.48
VMA21P41806 YDL187CYDL187C 330 nt-0.43□□□□□ -2.48
VMA21P41806 YDR029WYDR029W 315 nt-0.43□□□□□ -2.48
VMA21P41806 RPL22BYFL034C-A 369 nt-0.43□□□□□ -2.48
VMA21P41806 SDS22YKL193C 1017 nt-0.43□□□□□ -2.48
VMA21P41806 YPL197CYPL197C 414 nt-0.43□□□□□ -2.48
VMA21P41806 COX5BYIL111W 456 nt-0.44□□□□□ -2.48
VMA21P41806 PRP21YJL203W 843 nt-0.44□□□□□ -2.48
VMA21P41806 EFR3YMR212C 2349 nt-0.44□□□□□ -2.48
VMA21P41806 YER078W-AYER078W-A 165 nt-0.45□□□□□ -2.48
VMA21P41806 YKL111CYKL111C 336 nt-0.45□□□□□ -2.48
VMA21P41806 YOR186C-AYOR186C-A 210 nt-0.45□□□□□ -2.48
VMA21P41806 YPR160W-AYPR160W-A 81 nt-0.45□□□□□ -2.48
VMA21P41806 snR34snR34 203 nt-0.45□□□□□ -2.48
VMA21P41806 HAL9YOL089C 3093 nt-0.46□□□□□ -2.48
VMA21P41806 YFR012W-AYFR012W-A 87 nt-0.46□□□□□ -2.48
VMA21P41806 LIN1YHR156C 1023 nt-0.46□□□□□ -2.48
VMA21P41806 YLR198CYLR198C 360 nt-0.46□□□□□ -2.48
VMA21P41806 YLR271WYLR271W 825 nt-0.46□□□□□ -2.48
VMA21P41806 tF(GAA)BtF(GAA)B 73 nt-0.47□□□□□ -2.48
VMA21P41806 tF(GAA)FtF(GAA)F 73 nt-0.47□□□□□ -2.48
VMA21P41806 tF(GAA)GtF(GAA)G 73 nt-0.47□□□□□ -2.48
VMA21P41806 tF(GAA)H1tF(GAA)H1 73 nt-0.47□□□□□ -2.48
VMA21P41806 tF(GAA)H2tF(GAA)H2 73 nt-0.47□□□□□ -2.48
VMA21P41806 tF(GAA)MtF(GAA)M 73 nt-0.47□□□□□ -2.48
VMA21P41806 tF(GAA)P1tF(GAA)P1 73 nt-0.47□□□□□ -2.48
VMA21P41806 tF(GAA)P2tF(GAA)P2 73 nt-0.47□□□□□ -2.48
VMA21P41806 YJL135WYJL135W 318 nt-0.47□□□□□ -2.48
VMA21P41806 YNL146WYNL146W 303 nt-0.47□□□□□ -2.48
VMA21P41806 RRI2YOL117W 1938 nt-0.48□□□□□ -2.49
VMA21P41806 snR8snR8 190 nt-0.48□□□□□ -2.49
VMA21P41806 SRB7YDR308C 423 nt-0.48□□□□□ -2.49
VMA21P41806 LOC1YFR001W 615 nt-0.48□□□□□ -2.49
VMA21P41806 POL32YJR043C 1053 nt-0.48□□□□□ -2.49
VMA21P41806 NFU1YKL040C 771 nt-0.48□□□□□ -2.49
VMA21P41806 YKL136WYKL136W 399 nt-0.48□□□□□ -2.49
VMA21P41806 YPL185WYPL185W 396 nt-0.48□□□□□ -2.49
VMA21P41806 COY1YKL179C 2040 nt-0.48□□□□□ -2.49
VMA21P41806 YDR210WYDR210W 228 nt-0.49□□□□□ -2.49
VMA21P41806 OLI1Q0130 231 nt-0.49□□□□□ -2.49
VMA21P41806 MAM33YIL070C 801 nt-0.49□□□□□ -2.49
VMA21P41806 YAL067W-AYAL067W-A 228 nt-0.49□□□□□ -2.49
VMA21P41806 YAR053WYAR053W 297 nt-0.5□□□□□ -2.49
VMA21P41806 YNL211CYNL211C 261 nt-0.5□□□□□ -2.49
VMA21P41806 YOR345CYOR345C 351 nt-0.51□□□□□ -2.49
VMA21P41806 RSM23YGL129C 1353 nt-0.52□□□□□ -2.49
VMA21P41806 YDR220CYDR220C 294 nt-0.52□□□□□ -2.49
VMA21P41806 YER188C-AYER188C-A 300 nt-0.52□□□□□ -2.49
VMA21P41806 YMR290W-AYMR290W-A 348 nt-0.52□□□□□ -2.49
VMA21P41806 YDR269CYDR269C 324 nt-0.53□□□□□ -2.49
VMA21P41806 YMR013C-AYMR013C-A 150 nt-0.53□□□□□ -2.49
VMA21P41806 YKU70YMR284W 1809 nt-0.53□□□□□ -2.49
VMA21P41806 YBL008W-AYBL008W-A 240 nt-0.54□□□□□ -2.5
VMA21P41806 CWC23YGL128C 852 nt-0.55□□□□□ -2.5
VMA21P41806 YKL068W-AYKL068W-A 237 nt-0.55□□□□□ -2.5
VMA21P41806 AFB1YLR040C 675 nt-0.55□□□□□ -2.5
VMA21P41806 YMR075C-AYMR075C-A 366 nt-0.55□□□□□ -2.5
VMA21P41806 YNL146C-AYNL146C-A 195 nt-0.55□□□□□ -2.5
VMA21P41806 YBR076C-AYBR076C-A 267 nt-0.55□□□□□ -2.5
VMA21P41806 HTB1YDR224C 396 nt-0.56□□□□□ -2.5
VMA21P41806 NNF2YGR089W 2811 nt-0.56□□□□□ -2.5
VMA21P41806 YAP6YDR259C 1152 nt-0.57□□□□□ -2.5
VMA21P41806 YEL073CYEL073C 324 nt-0.57□□□□□ -2.5
VMA21P41806 YLR399W-AYLR399W-A 105 nt-0.57□□□□□ -2.5
VMA21P41806 NIP1YMR309C 2439 nt-0.57□□□□□ -2.5
VMA21P41806 YOL014WYOL014W 375 nt-0.58□□□□□ -2.5
VMA21P41806 YOR248WYOR248W 303 nt-0.58□□□□□ -2.5
VMA21P41806 IRC16YPR038W 360 nt-0.58□□□□□ -2.5
Retrieved 100 of 7,029 protein–RNA pairs in 60.2 ms