Protein–RNA interactions for Protein: P38956

SNF11, Transcription regulatory protein SNF11, yeastyeast

Predictions only

Length 169 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SNF11P38956 YOR192C-BYOR192C-B 5313 nt-0.09□□□□□ -2.42
SNF11P38956 LOC1YFR001W 615 nt-0.1□□□□□ -2.43
SNF11P38956 ACF4YJR083C 930 nt-0.1□□□□□ -2.43
SNF11P38956 CDC33YOL139C 642 nt-0.1□□□□□ -2.43
SNF11P38956 snR45snR45 172 nt-0.1□□□□□ -2.43
SNF11P38956 GPG1YGL121C 381 nt-0.11□□□□□ -2.43
SNF11P38956 YLR232WYLR232W 348 nt-0.11□□□□□ -2.43
SNF11P38956 BSC3YLR465C 309 nt-0.11□□□□□ -2.43
SNF11P38956 RCN2YOR220W 798 nt-0.11□□□□□ -2.43
SNF11P38956 YFR057WYFR057W 456 nt-0.12□□□□□ -2.43
SNF11P38956 VMA21YGR105W 234 nt-0.12□□□□□ -2.43
SNF11P38956 YHL042WYHL042W 453 nt-0.12□□□□□ -2.43
SNF11P38956 YHR054CYHR054C 1065 nt-0.12□□□□□ -2.43
SNF11P38956 MRPL31YKL138C 396 nt-0.12□□□□□ -2.43
SNF11P38956 YPL197CYPL197C 414 nt-0.12□□□□□ -2.43
SNF11P38956 SRB7YDR308C 423 nt-0.13□□□□□ -2.43
SNF11P38956 YGR270C-AYGR270C-A 219 nt-0.13□□□□□ -2.43
SNF11P38956 COX3Q0275 810 nt-0.13□□□□□ -2.43
SNF11P38956 YLR146W-AYLR146W-A 189 nt-0.13□□□□□ -2.43
SNF11P38956 YMR304C-AYMR304C-A 351 nt-0.13□□□□□ -2.43
SNF11P38956 COG8YML071C 1824 nt-0.13□□□□□ -2.43
SNF11P38956 FYV10YIL097W 1551 nt-0.14□□□□□ -2.43
SNF11P38956 LRP1YHR081W 555 nt-0.14□□□□□ -2.43
SNF11P38956 ISF1YMR081C 1017 nt-0.14□□□□□ -2.43
SNF11P38956 MRPL50YNR022C 420 nt-0.14□□□□□ -2.43
SNF11P38956 PRP42YDR235W 1635 nt-0.15□□□□□ -2.43
SNF11P38956 LIN1YHR156C 1023 nt-0.15□□□□□ -2.43
SNF11P38956 TFB6YOR352W 1032 nt-0.15□□□□□ -2.43
SNF11P38956 YER076W-AYER076W-A 348 nt-0.16□□□□□ -2.44
SNF11P38956 RPL35AYDL191W 363 nt-0.17□□□□□ -2.44
SNF11P38956 BUL2YML111W 2763 nt-0.17□□□□□ -2.44
SNF11P38956 YPL044CYPL044C 549 nt-0.17□□□□□ -2.44
SNF11P38956 CSM4YPL200W 471 nt-0.17□□□□□ -2.44
SNF11P38956 BI4Q0120 1917 nt-0.17□□□□□ -2.44
SNF11P38956 RFX1YLR176C 2436 nt-0.17□□□□□ -2.44
SNF11P38956 CUL3YGR003W 2235 nt-0.18□□□□□ -2.44
SNF11P38956 HTB1YDR224C 396 nt-0.18□□□□□ -2.44
SNF11P38956 YNL150WYNL150W 408 nt-0.18□□□□□ -2.44
SNF11P38956 SSS1YDR086C 243 nt-0.19□□□□□ -2.44
SNF11P38956 TIM10YHR005C-A 282 nt-0.19□□□□□ -2.44
SNF11P38956 YJR079WYJR079W 330 nt-0.19□□□□□ -2.44
SNF11P38956 ZIP2YGL249W 2115 nt-0.2□□□□□ -2.44
SNF11P38956 INP2YMR163C 2118 nt-0.2□□□□□ -2.44
SNF11P38956 YDR220CYDR220C 294 nt-0.2□□□□□ -2.44
SNF11P38956 ULI1YFR026C 510 nt-0.2□□□□□ -2.44
SNF11P38956 YNL146C-AYNL146C-A 195 nt-0.2□□□□□ -2.44
SNF11P38956 YER138W-AYER138W-A 105 nt-0.22□□□□□ -2.44
SNF11P38956 SDS22YKL193C 1017 nt-0.22□□□□□ -2.44
SNF11P38956 YIR018C-AYIR018C-A 138 nt-0.23□□□□□ -2.45
SNF11P38956 POL32YJR043C 1053 nt-0.23□□□□□ -2.45
SNF11P38956 RPS27AYKL156W 249 nt-0.23□□□□□ -2.45
SNF11P38956 YMR013C-AYMR013C-A 150 nt-0.23□□□□□ -2.45
SNF11P38956 YAR053WYAR053W 297 nt-0.24□□□□□ -2.45
SNF11P38956 YER188C-AYER188C-A 300 nt-0.25□□□□□ -2.45
SNF11P38956 YCL002CYCL002C 792 nt-0.25□□□□□ -2.45
SNF11P38956 ORC3YLL004W 1851 nt-0.25□□□□□ -2.45
SNF11P38956 RCO1YMR075W 2055 nt-0.26□□□□□ -2.45
SNF11P38956 IPI3YNL182C 1668 nt-0.26□□□□□ -2.45
SNF11P38956 YDR029WYDR029W 315 nt-0.26□□□□□ -2.45
SNF11P38956 YDR210WYDR210W 228 nt-0.27□□□□□ -2.45
SNF11P38956 YMR290W-AYMR290W-A 348 nt-0.27□□□□□ -2.45
SNF11P38956 YDR269CYDR269C 324 nt-0.28□□□□□ -2.45
SNF11P38956 CWC23YGL128C 852 nt-0.28□□□□□ -2.45
SNF11P38956 YNL050CYNL050C 813 nt-0.28□□□□□ -2.45
SNF11P38956 VAM3YOR106W 852 nt-0.28□□□□□ -2.45
SNF11P38956 RPB10YOR210W 213 nt-0.28□□□□□ -2.45
SNF11P38956 YJL135WYJL135W 318 nt-0.29□□□□□ -2.46
SNF11P38956 YKL136WYKL136W 399 nt-0.29□□□□□ -2.46
SNF11P38956 YLR271WYLR271W 825 nt-0.29□□□□□ -2.46
SNF11P38956 MCM10YIL150C 1716 nt-0.3□□□□□ -2.46
SNF11P38956 PRP39YML046W 1890 nt-0.3□□□□□ -2.46
SNF11P38956 COX5BYIL111W 456 nt-0.3□□□□□ -2.46
SNF11P38956 PRP21YJL203W 843 nt-0.3□□□□□ -2.46
SNF11P38956 AFB1YLR040C 675 nt-0.3□□□□□ -2.46
SNF11P38956 YOR186C-AYOR186C-A 210 nt-0.3□□□□□ -2.46
SNF11P38956 YDL187CYDL187C 330 nt-0.31□□□□□ -2.46
SNF11P38956 OST4YDL232W 111 nt-0.31□□□□□ -2.46
SNF11P38956 YDR371C-AYDR371C-A 105 nt-0.31□□□□□ -2.46
SNF11P38956 YGL015CYGL015C 393 nt-0.31□□□□□ -2.46
SNF11P38956 OLI1Q0130 231 nt-0.32□□□□□ -2.46
SNF11P38956 LEE1YPL054W 906 nt-0.32□□□□□ -2.46
SNF11P38956 YBR064WYBR064W 429 nt-0.32□□□□□ -2.46
SNF11P38956 TFB5YDR079C-A 219 nt-0.33□□□□□ -2.46
SNF11P38956 YLR198CYLR198C 360 nt-0.33□□□□□ -2.46
SNF11P38956 YPR096CYPR096C 303 nt-0.33□□□□□ -2.46
SNF11P38956 YPL185WYPL185W 396 nt-0.34□□□□□ -2.46
SNF11P38956 RSM23YGL129C 1353 nt-0.34□□□□□ -2.46
SNF11P38956 RPS26AYGL189C 360 nt-0.35□□□□□ -2.47
SNF11P38956 YLR217WYLR217W 324 nt-0.35□□□□□ -2.47
SNF11P38956 YOR248WYOR248W 303 nt-0.35□□□□□ -2.47
SNF11P38956 YPR160W-AYPR160W-A 81 nt-0.35□□□□□ -2.47
SNF11P38956 NFU1YKL040C 771 nt-0.36□□□□□ -2.47
SNF11P38956 YMR141W-AYMR141W-A 225 nt-0.36□□□□□ -2.47
SNF11P38956 EFR3YMR212C 2349 nt-0.37□□□□□ -2.47
SNF11P38956 CUP1-1YHR053C 186 nt-0.37□□□□□ -2.47
SNF11P38956 CUP1-2YHR055C 186 nt-0.37□□□□□ -2.47
SNF11P38956 ILM1YJR118C 612 nt-0.37□□□□□ -2.47
SNF11P38956 YFR012W-AYFR012W-A 87 nt-0.38□□□□□ -2.47
SNF11P38956 MAM33YIL070C 801 nt-0.38□□□□□ -2.47
SNF11P38956 YBR076C-AYBR076C-A 267 nt-0.38□□□□□ -2.47
Retrieved 100 of 7,029 protein–RNA pairs in 38.7 ms