Protein–RNA interactions for Protein: P25808

SPB4, ATP-dependent rRNA helicase SPB4, yeastyeast

Predicted RBP Predictions only

Length 606 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SPB4P25808 YLR278CYLR278C 4026 nt3.39□□□□□ -1.87
SPB4P25808 SPO14YKR031C 5052 nt3.37□□□□□ -1.87
SPB4P25808 YMR326CYMR326C 309 nt3.37□□□□□ -1.87
SPB4P25808 RSE1YML049C 4086 nt3.37□□□□□ -1.87
SPB4P25808 MAK10YEL053C 2202 nt3.37□□□□□ -1.87
SPB4P25808 MSH5YDL154W 2706 nt3.37□□□□□ -1.87
SPB4P25808 SLD3YGL113W 2007 nt3.37□□□□□ -1.87
SPB4P25808 YDR341CYDR341C 1824 nt3.36□□□□□ -1.87
SPB4P25808 RPS29AYLR388W 171 nt3.36□□□□□ -1.87
SPB4P25808 YPL044CYPL044C 549 nt3.36□□□□□ -1.87
SPB4P25808 AHC1YOR023C 1701 nt3.36□□□□□ -1.87
SPB4P25808 SCP160YJL080C 3669 nt3.35□□□□□ -1.87
SPB4P25808 DNA2YHR164C 4569 nt3.35□□□□□ -1.87
SPB4P25808 SIR4YDR227W 4077 nt3.34□□□□□ -1.87
SPB4P25808 PHO91YNR013C 2685 nt3.34□□□□□ -1.87
SPB4P25808 SMC6YLR383W 3345 nt3.34□□□□□ -1.88
SPB4P25808 BNR1YIL159W 4128 nt3.34□□□□□ -1.88
SPB4P25808 CTF4YPR135W 2784 nt3.33□□□□□ -1.88
SPB4P25808 PMR1YGL167C 2853 nt3.33□□□□□ -1.88
SPB4P25808 YDR521WYDR521W 336 nt3.33□□□□□ -1.88
SPB4P25808 TCB2YNL087W 3537 nt3.33□□□□□ -1.88
SPB4P25808 FAR11YNL127W 2862 nt3.33□□□□□ -1.88
SPB4P25808 YIL156W-BYIL156W-B 222 nt3.32□□□□□ -1.88
SPB4P25808 MLH3YPL164C 2148 nt3.31□□□□□ -1.88
SPB4P25808 ILS1YBL076C 3219 nt3.31□□□□□ -1.88
SPB4P25808 INO80YGL150C 4470 nt3.31□□□□□ -1.88
SPB4P25808 DGR2YKL121W 2559 nt3.31□□□□□ -1.88
SPB4P25808 YJR039WYJR039W 3366 nt3.31□□□□□ -1.88
SPB4P25808 RTT107YHR154W 3213 nt3.31□□□□□ -1.88
SPB4P25808 TRM3YDL112W 4311 nt3.3□□□□□ -1.88
SPB4P25808 SRO77YBL106C 3033 nt3.3□□□□□ -1.88
SPB4P25808 YFR012W-AYFR012W-A 87 nt3.3□□□□□ -1.88
SPB4P25808 YIL134C-AYIL134C-A 204 nt3.3□□□□□ -1.88
SPB4P25808 SLH1YGR271W 5904 nt3.3□□□□□ -1.88
SPB4P25808 TFB5YDR079C-A 219 nt3.29□□□□□ -1.88
SPB4P25808 YIL169CYIL169C 2988 nt3.29□□□□□ -1.88
SPB4P25808 TOM1YDR457W 9807 nt3.28□□□□□ -1.88
SPB4P25808 YDR239CYDR239C 2364 nt3.28□□□□□ -1.88
SPB4P25808 YHR217CYHR217C 462 nt3.28□□□□□ -1.88
SPB4P25808 TOP2YNL088W 4287 nt3.27□□□□□ -1.89
SPB4P25808 PBY1YBR094W 2262 nt3.27□□□□□ -1.89
SPB4P25808 YJL026C-AYJL026C-A 222 nt3.27□□□□□ -1.89
SPB4P25808 RPS17AYML024W 411 nt3.27□□□□□ -1.89
SPB4P25808 SBE22YHR103W 2559 nt3.26□□□□□ -1.89
SPB4P25808 ALK1YGL021W 2283 nt3.26□□□□□ -1.89
SPB4P25808 FLO11YIR019C 4104 nt3.25□□□□□ -1.89
SPB4P25808 TAO3YIL129C 7131 nt3.25□□□□□ -1.89
SPB4P25808 ESL2YKR096W 3588 nt3.25□□□□□ -1.89
SPB4P25808 ECM29YHL030W 5607 nt3.25□□□□□ -1.89
SPB4P25808 EDS1YBR033W 2760 nt3.25□□□□□ -1.89
SPB4P25808 BUD2YKL092C 3315 nt3.24□□□□□ -1.89
SPB4P25808 SLN1YIL147C 3663 nt3.24□□□□□ -1.89
SPB4P25808 YER053C-AYER053C-A 114 nt3.24□□□□□ -1.89
SPB4P25808 JSN1YJR091C 3276 nt3.24□□□□□ -1.89
SPB4P25808 YBR206WYBR206W 324 nt3.23□□□□□ -1.89
SPB4P25808 KRE33YNL132W 3171 nt3.22□□□□□ -1.89
SPB4P25808 RPS30BYOR182C 192 nt3.22□□□□□ -1.89
SPB4P25808 SAC3YDR159W 3906 nt3.21□□□□□ -1.9
SPB4P25808 COX12YLR038C 252 nt3.21□□□□□ -1.9
SPB4P25808 PAA1YDR071C 576 nt3.2□□□□□ -1.9
SPB4P25808 TRL1YJL087C 2484 nt3.2□□□□□ -1.9
SPB4P25808 CTR9YOL145C 3234 nt3.2□□□□□ -1.9
SPB4P25808 AGC1YPR021C 2709 nt3.2□□□□□ -1.9
SPB4P25808 SAP190YKR028W 3102 nt3.19□□□□□ -1.9
SPB4P25808 RAX2YLR084C 3663 nt3.19□□□□□ -1.9
SPB4P25808 snR70snR70 164 nt3.19□□□□□ -1.9
SPB4P25808 YDL247W-AYDL247W-A 75 nt3.19□□□□□ -1.9
SPB4P25808 YDR354C-AYDR354C-A 144 nt3.19□□□□□ -1.9
SPB4P25808 SBH1YER087C-B 249 nt3.19□□□□□ -1.9
SPB4P25808 HMI1YOL095C 2121 nt3.19□□□□□ -1.9
SPB4P25808 tL(UAA)QtL(UAA)Q 85 nt3.18□□□□□ -1.9
SPB4P25808 YPR097WYPR097W 3222 nt3.18□□□□□ -1.9
SPB4P25808 TTI1YKL033W 3117 nt3.17□□□□□ -1.9
SPB4P25808 YBR099CYBR099C 384 nt3.17□□□□□ -1.9
SPB4P25808 DYN1YKR054C 12279 nt3.17□□□□□ -1.9
SPB4P25808 SYH1YPL105C 2550 nt3.16□□□□□ -1.9
SPB4P25808 SAP1YER047C 2694 nt3.16□□□□□ -1.9
SPB4P25808 YLR282CYLR282C 342 nt3.16□□□□□ -1.9
SPB4P25808 CDC31YOR257W 486 nt3.16□□□□□ -1.9
SPB4P25808 YIL082W-AYIL082W-A 4497 nt3.15□□□□□ -1.9
SPB4P25808 UBR1YGR184C 5853 nt3.15□□□□□ -1.9
SPB4P25808 OST4YDL232W 111 nt3.15□□□□□ -1.91
SPB4P25808 YIL002W-AYIL002W-A 210 nt3.15□□□□□ -1.91
SPB4P25808 MSH6YDR097C 3729 nt3.15□□□□□ -1.91
SPB4P25808 PNC1YGL037C 651 nt3.14□□□□□ -1.91
SPB4P25808 RPL33AYPL143W 324 nt3.14□□□□□ -1.91
SPB4P25808 YPR203WYPR203W 309 nt3.14□□□□□ -1.91
SPB4P25808 SLI15YBR156C 2097 nt3.13□□□□□ -1.91
SPB4P25808 UBP1YDL122W 2430 nt3.13□□□□□ -1.91
SPB4P25808 YNL211CYNL211C 261 nt3.13□□□□□ -1.91
SPB4P25808 PDR3YBL005W 2931 nt3.13□□□□□ -1.91
SPB4P25808 BPT1YLL015W 4680 nt3.12□□□□□ -1.91
SPB4P25808 CDC60YPL160W 3273 nt3.12□□□□□ -1.91
SPB4P25808 snR61snR61 90 nt3.12□□□□□ -1.91
SPB4P25808 YHR086W-AYHR086W-A 162 nt3.12□□□□□ -1.91
SPB4P25808 tW(CCA)G1tW(CCA)G1 72 nt3.12□□□□□ -1.91
SPB4P25808 tW(CCA)G2tW(CCA)G2 72 nt3.12□□□□□ -1.91
SPB4P25808 tW(CCA)JtW(CCA)J 72 nt3.12□□□□□ -1.91
SPB4P25808 tW(CCA)KtW(CCA)K 72 nt3.12□□□□□ -1.91
SPB4P25808 tW(CCA)MtW(CCA)M 72 nt3.12□□□□□ -1.91
Retrieved 100 of 7,029 protein–RNA pairs in 13.8 ms