Protein–RNA interactions for Protein: Q8N1N4

KRT78, Keratin, type II cytoskeletal 78, humanhuman

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT78Q8N1N4 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC19.46■□□□□ 0.71
KRT78Q8N1N4 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC19.46■□□□□ 0.71
KRT78Q8N1N4 ISCU-212ENST00000547005 795 ntTSL 3 BASIC19.46■□□□□ 0.71
KRT78Q8N1N4 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
KRT78Q8N1N4 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC19.46■□□□□ 0.71
KRT78Q8N1N4 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC19.46■□□□□ 0.71
KRT78Q8N1N4 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC19.46■□□□□ 0.71
KRT78Q8N1N4 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
KRT78Q8N1N4 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
KRT78Q8N1N4 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC19.46■□□□□ 0.71
KRT78Q8N1N4 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
KRT78Q8N1N4 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
KRT78Q8N1N4 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
KRT78Q8N1N4 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
KRT78Q8N1N4 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
KRT78Q8N1N4 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
KRT78Q8N1N4 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC19.45■□□□□ 0.7
KRT78Q8N1N4 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
KRT78Q8N1N4 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC19.45■□□□□ 0.7
KRT78Q8N1N4 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
KRT78Q8N1N4 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
KRT78Q8N1N4 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
KRT78Q8N1N4 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC19.45■□□□□ 0.7
KRT78Q8N1N4 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
KRT78Q8N1N4 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
KRT78Q8N1N4 AL355472.2-201ENST00000422958 438 ntBASIC19.45■□□□□ 0.7
KRT78Q8N1N4 CROCCP5-201ENST00000436658 830 ntBASIC19.45■□□□□ 0.7
KRT78Q8N1N4 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC19.45■□□□□ 0.7
KRT78Q8N1N4 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC19.45■□□□□ 0.7
KRT78Q8N1N4 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
KRT78Q8N1N4 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC19.45■□□□□ 0.7
KRT78Q8N1N4 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
KRT78Q8N1N4 MKRN4P-201ENST00000444706 1521 ntBASIC19.45■□□□□ 0.7
KRT78Q8N1N4 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
KRT78Q8N1N4 STK25-205ENST00000405883 1904 ntTSL 2 BASIC19.45■□□□□ 0.7
KRT78Q8N1N4 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
KRT78Q8N1N4 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC19.45■□□□□ 0.7
KRT78Q8N1N4 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
KRT78Q8N1N4 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC19.44■□□□□ 0.7
KRT78Q8N1N4 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC19.44■□□□□ 0.7
KRT78Q8N1N4 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC19.44■□□□□ 0.7
KRT78Q8N1N4 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
KRT78Q8N1N4 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC19.44■□□□□ 0.7
KRT78Q8N1N4 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
KRT78Q8N1N4 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
KRT78Q8N1N4 AL050303.2-201ENST00000619798 666 ntBASIC19.44■□□□□ 0.7
KRT78Q8N1N4 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC19.44■□□□□ 0.7
KRT78Q8N1N4 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
KRT78Q8N1N4 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
KRT78Q8N1N4 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
KRT78Q8N1N4 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC19.44■□□□□ 0.7
KRT78Q8N1N4 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
KRT78Q8N1N4 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
KRT78Q8N1N4 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
KRT78Q8N1N4 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
KRT78Q8N1N4 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
KRT78Q8N1N4 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
KRT78Q8N1N4 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
KRT78Q8N1N4 DPP3P2-201ENST00000416030 1696 ntBASIC19.43■□□□□ 0.7
KRT78Q8N1N4 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
KRT78Q8N1N4 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC19.43■□□□□ 0.7
KRT78Q8N1N4 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
KRT78Q8N1N4 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
KRT78Q8N1N4 HES2-205ENST00000487437 968 ntTSL 3 BASIC19.43■□□□□ 0.7
KRT78Q8N1N4 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC19.43■□□□□ 0.7
KRT78Q8N1N4 AL121832.2-201ENST00000610979 668 ntBASIC19.43■□□□□ 0.7
KRT78Q8N1N4 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
KRT78Q8N1N4 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
KRT78Q8N1N4 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC19.43■□□□□ 0.7
KRT78Q8N1N4 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
KRT78Q8N1N4 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC19.43■□□□□ 0.7
KRT78Q8N1N4 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
KRT78Q8N1N4 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
KRT78Q8N1N4 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC19.43■□□□□ 0.7
KRT78Q8N1N4 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC19.42■□□□□ 0.7
KRT78Q8N1N4 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC19.42■□□□□ 0.7
KRT78Q8N1N4 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC19.42■□□□□ 0.7
KRT78Q8N1N4 AL512408.1-201ENST00000569378 2000 ntBASIC19.42■□□□□ 0.7
KRT78Q8N1N4 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC19.42■□□□□ 0.7
KRT78Q8N1N4 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC19.42■□□□□ 0.7
KRT78Q8N1N4 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC19.42■□□□□ 0.7
KRT78Q8N1N4 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC19.42■□□□□ 0.7
KRT78Q8N1N4 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC19.42■□□□□ 0.7
KRT78Q8N1N4 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
KRT78Q8N1N4 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC19.42■□□□□ 0.7
KRT78Q8N1N4 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
KRT78Q8N1N4 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
KRT78Q8N1N4 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC19.42■□□□□ 0.7
KRT78Q8N1N4 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
KRT78Q8N1N4 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
KRT78Q8N1N4 LSM12P1-201ENST00000411836 588 ntBASIC19.42■□□□□ 0.7
KRT78Q8N1N4 OAS3-207ENST00000551007 998 ntTSL 2 BASIC19.42■□□□□ 0.7
KRT78Q8N1N4 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC19.42■□□□□ 0.7
KRT78Q8N1N4 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
KRT78Q8N1N4 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
KRT78Q8N1N4 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC19.42■□□□□ 0.7
KRT78Q8N1N4 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
KRT78Q8N1N4 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
KRT78Q8N1N4 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
KRT78Q8N1N4 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC19.42■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 35 ms