Protein–RNA interactions for Protein: Q08285

RRP40, Exosome complex component RRP40, yeastyeast

Known RBP Predictions only

Length 240 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RRP40Q08285 EMT1tM(CAU)D 73 nt0.98□□□□□ -2.25
RRP40Q08285 EMT5tM(CAU)J1 73 nt0.98□□□□□ -2.25
RRP40Q08285 EMT3tM(CAU)J2 73 nt0.98□□□□□ -2.25
RRP40Q08285 EMT4tM(CAU)M 73 nt0.98□□□□□ -2.25
RRP40Q08285 EMT2tM(CAU)O2 73 nt0.98□□□□□ -2.25
RRP40Q08285 YGR025WYGR025W 303 nt0.98□□□□□ -2.25
RRP40Q08285 YML009C-AYML009C-A 327 nt0.98□□□□□ -2.25
RRP40Q08285 snR14snR14 160 nt0.98□□□□□ -2.25
RRP40Q08285 RPL9AYGL147C 576 nt0.97□□□□□ -2.25
RRP40Q08285 TSC3YBR058C-A 243 nt0.97□□□□□ -2.25
RRP40Q08285 YLL054CYLL054C 2532 nt0.97□□□□□ -2.25
RRP40Q08285 PIP2YOR363C 2991 nt0.96□□□□□ -2.26
RRP40Q08285 CDC39YCR093W 6327 nt0.96□□□□□ -2.26
RRP40Q08285 PIG1YLR273C 1947 nt0.96□□□□□ -2.26
RRP40Q08285 YER023C-AYER023C-A 213 nt0.96□□□□□ -2.26
RRP40Q08285 APQ13YJL075C 417 nt0.96□□□□□ -2.26
RRP40Q08285 HIT1YJR055W 495 nt0.96□□□□□ -2.26
RRP40Q08285 YLL020CYLL020C 306 nt0.96□□□□□ -2.26
RRP40Q08285 APL3YBL037W 3078 nt0.96□□□□□ -2.26
RRP40Q08285 PXA2YKL188C 2562 nt0.96□□□□□ -2.26
RRP40Q08285 APL2YKL135C 2181 nt0.96□□□□□ -2.26
RRP40Q08285 EAF1YDR359C 2949 nt0.95□□□□□ -2.26
RRP40Q08285 ROM2YLR371W 4071 nt0.95□□□□□ -2.26
RRP40Q08285 SEC3YER008C 4011 nt0.95□□□□□ -2.26
RRP40Q08285 LYS14YDR034C 2373 nt0.95□□□□□ -2.26
RRP40Q08285 YDR114CYDR114C 303 nt0.95□□□□□ -2.26
RRP40Q08285 MXR1YER042W 555 nt0.95□□□□□ -2.26
RRP40Q08285 BIG1YHR101C 1008 nt0.95□□□□□ -2.26
RRP40Q08285 YLR146W-AYLR146W-A 189 nt0.95□□□□□ -2.26
RRP40Q08285 SCC2YDR180W 4482 nt0.95□□□□□ -2.26
RRP40Q08285 STB6YKL072W 2301 nt0.94□□□□□ -2.26
RRP40Q08285 NOC3YLR002C 1992 nt0.94□□□□□ -2.26
RRP40Q08285 SPT21YMR179W 2277 nt0.94□□□□□ -2.26
RRP40Q08285 HMLALPHA2YCL067C 633 nt0.94□□□□□ -2.26
RRP40Q08285 MATALPHA2YCR039C 633 nt0.94□□□□□ -2.26
RRP40Q08285 YHR139C-AYHR139C-A 312 nt0.94□□□□□ -2.26
RRP40Q08285 BEM2YER155C 6504 nt0.93□□□□□ -2.26
RRP40Q08285 YMR153C-AYMR153C-A 336 nt0.93□□□□□ -2.26
RRP40Q08285 GPI15YNL038W 690 nt0.93□□□□□ -2.26
RRP40Q08285 ENV11YGR071C 2583 nt0.93□□□□□ -2.26
RRP40Q08285 NUP145YGL092W 3954 nt0.92□□□□□ -2.26
RRP40Q08285 RPL32YBL092W 393 nt0.92□□□□□ -2.26
RRP40Q08285 NUT2YPR168W 474 nt0.92□□□□□ -2.26
RRP40Q08285 CLU1YMR012W 3834 nt0.92□□□□□ -2.26
RRP40Q08285 EMC4YGL231C 573 nt0.91□□□□□ -2.26
RRP40Q08285 YGL239CYGL239C 315 nt0.91□□□□□ -2.26
RRP40Q08285 YMR175W-AYMR175W-A 195 nt0.91□□□□□ -2.26
RRP40Q08285 YMR242W-AYMR242W-A 90 nt0.91□□□□□ -2.26
RRP40Q08285 RUF22RUF22 515 nt0.91□□□□□ -2.26
RRP40Q08285 YNR025CYNR025C 360 nt0.91□□□□□ -2.26
RRP40Q08285 DOP1YDR141C 5097 nt0.9□□□□□ -2.26
RRP40Q08285 MPT5YGL178W 2580 nt0.9□□□□□ -2.27
RRP40Q08285 YDR182W-AYDR182W-A 204 nt0.9□□□□□ -2.27
RRP40Q08285 YGR045CYGR045C 363 nt0.9□□□□□ -2.27
RRP40Q08285 NBL1YHR199C-A 222 nt0.9□□□□□ -2.27
RRP40Q08285 STE18YJR086W 333 nt0.9□□□□□ -2.27
RRP40Q08285 IFH1YLR223C 3258 nt0.89□□□□□ -2.27
RRP40Q08285 AI5_ALPHAQ0070 1893 nt0.89□□□□□ -2.27
RRP40Q08285 YCR001WYCR001W 315 nt0.89□□□□□ -2.27
RRP40Q08285 EAF6YJR082C 342 nt0.89□□□□□ -2.27
RRP40Q08285 YBR012CYBR012C 420 nt0.89□□□□□ -2.27
RRP40Q08285 SWI6YLR182W 2412 nt0.88□□□□□ -2.27
RRP40Q08285 YLL032CYLL032C 2478 nt0.88□□□□□ -2.27
RRP40Q08285 RPF1YHR088W 888 nt0.88□□□□□ -2.27
RRP40Q08285 MRPL31YKL138C 396 nt0.88□□□□□ -2.27
RRP40Q08285 PBI2YNL015W 228 nt0.88□□□□□ -2.27
RRP40Q08285 SCW11YGL028C 1629 nt0.88□□□□□ -2.27
RRP40Q08285 RFX1YLR176C 2436 nt0.88□□□□□ -2.27
RRP40Q08285 SMC1YFL008W 3678 nt0.87□□□□□ -2.27
RRP40Q08285 YAR009CYAR009C 3591 nt0.87□□□□□ -2.27
RRP40Q08285 URM1YIL008W 300 nt0.87□□□□□ -2.27
RRP40Q08285 PHS1YJL097W 654 nt0.87□□□□□ -2.27
RRP40Q08285 NFU1YKL040C 771 nt0.87□□□□□ -2.27
RRP40Q08285 SET3YKR029C 2256 nt0.86□□□□□ -2.27
RRP40Q08285 ALY2YJL084C 3141 nt0.86□□□□□ -2.27
RRP40Q08285 STF2YGR008C 255 nt0.86□□□□□ -2.27
RRP40Q08285 SDH2YLL041C 801 nt0.86□□□□□ -2.27
RRP40Q08285 ERP4YOR016C 624 nt0.86□□□□□ -2.27
RRP40Q08285 YPL182CYPL182C 384 nt0.86□□□□□ -2.27
RRP40Q08285 YIL066W-AYIL066W-A 444 nt0.85□□□□□ -2.27
RRP40Q08285 YLR269CYLR269C 351 nt0.85□□□□□ -2.27
RRP40Q08285 HUG1YML058W-A 207 nt0.85□□□□□ -2.27
RRP40Q08285 KAP120YPL125W 3099 nt0.85□□□□□ -2.27
RRP40Q08285 YBR076C-AYBR076C-A 267 nt0.85□□□□□ -2.27
RRP40Q08285 YBR221W-AYBR221W-A 105 nt0.85□□□□□ -2.27
RRP40Q08285 YDR269CYDR269C 324 nt0.84□□□□□ -2.27
RRP40Q08285 YER076W-AYER076W-A 348 nt0.84□□□□□ -2.27
RRP40Q08285 UPS1YLR193C 528 nt0.84□□□□□ -2.27
RRP40Q08285 YML108WYML108W 318 nt0.84□□□□□ -2.27
RRP40Q08285 PAU24YBR301W 363 nt0.84□□□□□ -2.27
RRP40Q08285 SLD3YGL113W 2007 nt0.83□□□□□ -2.28
RRP40Q08285 NUP157YER105C 4176 nt0.83□□□□□ -2.28
RRP40Q08285 YER084W-AYER084W-A 513 nt0.83□□□□□ -2.28
RRP40Q08285 YIL059CYIL059C 366 nt0.83□□□□□ -2.28
RRP40Q08285 PAM16YJL104W 450 nt0.83□□□□□ -2.28
RRP40Q08285 SAS3YBL052C 2496 nt0.82□□□□□ -2.28
RRP40Q08285 AIM44YPL158C 2277 nt0.82□□□□□ -2.28
RRP40Q08285 STO1YMR125W 2586 nt0.82□□□□□ -2.28
RRP40Q08285 YER087C-AYER087C-A 552 nt0.82□□□□□ -2.28
RRP40Q08285 RPL16AYIL133C 600 nt0.82□□□□□ -2.28
Retrieved 100 of 7,029 protein–RNA pairs in 32.3 ms