Protein–RNA interactions for Protein: P54860

UFD2, E4 ubiquitin-protein ligase UFD2, yeastyeast

Predictions only

Length 961 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
UFD2P54860 PNC1YGL037C 651 nt2.95□□□□□ -1.94
UFD2P54860 RPS27BYHR021C 249 nt2.95□□□□□ -1.94
UFD2P54860 YOR394C-AYOR394C-A 168 nt2.95□□□□□ -1.94
UFD2P54860 ZRG8YER033C 3231 nt2.95□□□□□ -1.94
UFD2P54860 MMS22YLR320W 4365 nt2.95□□□□□ -1.94
UFD2P54860 CLN3YAL040C 1743 nt2.95□□□□□ -1.94
UFD2P54860 FRE2YKL220C 2136 nt2.95□□□□□ -1.94
UFD2P54860 RPO41YFL036W 4056 nt2.94□□□□□ -1.94
UFD2P54860 YGR164WYGR164W 336 nt2.94□□□□□ -1.94
UFD2P54860 AMS1YGL156W 3252 nt2.94□□□□□ -1.94
UFD2P54860 SLN1YIL147C 3663 nt2.94□□□□□ -1.94
UFD2P54860 SWA2YDR320C 2007 nt2.93□□□□□ -1.94
UFD2P54860 LYS14YDR034C 2373 nt2.93□□□□□ -1.94
UFD2P54860 LRE1YCL051W 1752 nt2.93□□□□□ -1.94
UFD2P54860 YLR278CYLR278C 4026 nt2.93□□□□□ -1.94
UFD2P54860 YNL205CYNL205C 423 nt2.93□□□□□ -1.94
UFD2P54860 YOR218CYOR218C 420 nt2.93□□□□□ -1.94
UFD2P54860 snR52snR52 92 nt2.93□□□□□ -1.94
UFD2P54860 PDR1YGL013C 3207 nt2.93□□□□□ -1.94
UFD2P54860 NAB6YML117W 3405 nt2.92□□□□□ -1.94
UFD2P54860 YCR043CYCR043C 384 nt2.92□□□□□ -1.94
UFD2P54860 PAU8YAL068C 363 nt2.92□□□□□ -1.94
UFD2P54860 PAU18YLL064C 363 nt2.92□□□□□ -1.94
UFD2P54860 PAU6YNR076W 363 nt2.92□□□□□ -1.94
UFD2P54860 PAU20YOL161C 363 nt2.92□□□□□ -1.94
UFD2P54860 SPC98YNL126W 2541 nt2.92□□□□□ -1.94
UFD2P54860 EMP24YGL200C 612 nt2.91□□□□□ -1.94
UFD2P54860 YHR071C-AYHR071C-A 321 nt2.91□□□□□ -1.94
UFD2P54860 YHR086W-AYHR086W-A 162 nt2.91□□□□□ -1.94
UFD2P54860 UTP14YML093W 2700 nt2.91□□□□□ -1.94
UFD2P54860 SPO75YLL005C 2607 nt2.9□□□□□ -1.94
UFD2P54860 GEA1YJR031C 4227 nt2.89□□□□□ -1.95
UFD2P54860 SAP1YER047C 2694 nt2.89□□□□□ -1.95
UFD2P54860 MRD1YPR112C 2664 nt2.89□□□□□ -1.95
UFD2P54860 ULI1YFR026C 510 nt2.88□□□□□ -1.95
UFD2P54860 ECM12YHR021W-A 456 nt2.88□□□□□ -1.95
UFD2P54860 YBL012CYBL012C 402 nt2.88□□□□□ -1.95
UFD2P54860 YOR381W-AYOR381W-A 168 nt2.88□□□□□ -1.95
UFD2P54860 MCM10YIL150C 1716 nt2.88□□□□□ -1.95
UFD2P54860 CYR1YJL005W 6081 nt2.87□□□□□ -1.95
UFD2P54860 SRP14YDL092W 441 nt2.87□□□□□ -1.95
UFD2P54860 COF1YLL050C 432 nt2.87□□□□□ -1.95
UFD2P54860 BNR1YIL159W 4128 nt2.87□□□□□ -1.95
UFD2P54860 YNL018CYNL018C 1839 nt2.86□□□□□ -1.95
UFD2P54860 VTC3YPL019C 2508 nt2.86□□□□□ -1.95
UFD2P54860 HYP2YEL034W 474 nt2.86□□□□□ -1.95
UFD2P54860 VTC1YER072W 390 nt2.86□□□□□ -1.95
UFD2P54860 FLO11YIR019C 4104 nt2.86□□□□□ -1.95
UFD2P54860 CAF120YNL278W 3183 nt2.86□□□□□ -1.95
UFD2P54860 ESL2YKR096W 3588 nt2.85□□□□□ -1.95
UFD2P54860 snR85snR85 171 nt2.85□□□□□ -1.95
UFD2P54860 YCL046WYCL046W 324 nt2.85□□□□□ -1.95
UFD2P54860 MNE1YOR350C 1992 nt2.85□□□□□ -1.95
UFD2P54860 YIL020C-AYIL020C-A 339 nt2.84□□□□□ -1.95
UFD2P54860 YDR098C-BYDR098C-B 5268 nt2.84□□□□□ -1.96
UFD2P54860 YDR210C-DYDR210C-D 5268 nt2.84□□□□□ -1.96
UFD2P54860 YDR316W-BYDR316W-B 5268 nt2.84□□□□□ -1.96
UFD2P54860 YDR365W-BYDR365W-B 5268 nt2.84□□□□□ -1.96
UFD2P54860 YER138CYER138C 5268 nt2.84□□□□□ -1.96
UFD2P54860 YER160CYER160C 5268 nt2.84□□□□□ -1.96
UFD2P54860 YGR038C-BYGR038C-B 5268 nt2.84□□□□□ -1.96
UFD2P54860 YGR161C-DYGR161C-D 5268 nt2.84□□□□□ -1.96
UFD2P54860 YJR027WYJR027W 5268 nt2.84□□□□□ -1.96
UFD2P54860 YLR157C-BYLR157C-B 5268 nt2.84□□□□□ -1.96
UFD2P54860 YML039WYML039W 5268 nt2.84□□□□□ -1.96
UFD2P54860 YML045WYML045W 5268 nt2.84□□□□□ -1.96
UFD2P54860 YMR050CYMR050C 5268 nt2.84□□□□□ -1.96
UFD2P54860 YOL103W-BYOL103W-B 5268 nt2.84□□□□□ -1.96
UFD2P54860 YBR012W-BYBR012W-B 5271 nt2.84□□□□□ -1.96
UFD2P54860 YOR142W-BYOR142W-B 5268 nt2.84□□□□□ -1.96
UFD2P54860 YPL257W-BYPL257W-B 5268 nt2.84□□□□□ -1.96
UFD2P54860 YPR158W-BYPR158W-B 5271 nt2.84□□□□□ -1.96
UFD2P54860 MSC6YOR354C 2079 nt2.83□□□□□ -1.96
UFD2P54860 YDR003W-AYDR003W-A 123 nt2.83□□□□□ -1.96
UFD2P54860 YIL156W-BYIL156W-B 222 nt2.83□□□□□ -1.96
UFD2P54860 YOR055WYOR055W 435 nt2.83□□□□□ -1.96
UFD2P54860 YBR174CYBR174C 315 nt2.83□□□□□ -1.96
UFD2P54860 SPO21YOL091W 1830 nt2.83□□□□□ -1.96
UFD2P54860 YDR182W-AYDR182W-A 204 nt2.82□□□□□ -1.96
UFD2P54860 YPR203WYPR203W 309 nt2.82□□□□□ -1.96
UFD2P54860 CUL3YGR003W 2235 nt2.82□□□□□ -1.96
UFD2P54860 NUM1YDR150W 8247 nt2.82□□□□□ -1.96
UFD2P54860 RPL34BYIL052C 366 nt2.81□□□□□ -1.96
UFD2P54860 YOR161W-BYOR161W-B 261 nt2.81□□□□□ -1.96
UFD2P54860 ZRG17YNR039C 1818 nt2.81□□□□□ -1.96
UFD2P54860 SRO77YBL106C 3033 nt2.8□□□□□ -1.96
UFD2P54860 YJL120WYJL120W 324 nt2.8□□□□□ -1.96
UFD2P54860 YLR154W-AYLR154W-A 186 nt2.8□□□□□ -1.96
UFD2P54860 LCL1YPL056C 306 nt2.8□□□□□ -1.96
UFD2P54860 ATG11YPR049C 3537 nt2.8□□□□□ -1.96
UFD2P54860 ELG1YOR144C 2376 nt2.8□□□□□ -1.96
UFD2P54860 YOR072W-BYOR072W-B 162 nt2.79□□□□□ -1.96
UFD2P54860 snR48snR48 113 nt2.79□□□□□ -1.96
UFD2P54860 SRB8YCR081W 4284 nt2.79□□□□□ -1.96
UFD2P54860 ARP8YOR141C 2646 nt2.79□□□□□ -1.96
UFD2P54860 MET18YIL128W 3099 nt2.79□□□□□ -1.96
UFD2P54860 PHO91YNR013C 2685 nt2.78□□□□□ -1.96
UFD2P54860 PUT3YKL015W 2940 nt2.78□□□□□ -1.96
UFD2P54860 VPS8YAL002W 3825 nt2.78□□□□□ -1.96
UFD2P54860 RPS25BYLR333C 327 nt2.78□□□□□ -1.96
Retrieved 100 of 7,029 protein–RNA pairs in 22.8 ms