Protein–RNA interactions for Protein: P34110

VPS35, Vacuolar protein sorting-associated protein 35, yeastyeast

Predictions only

Length 944 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
VPS35P34110 SWI5YDR146C 2130 nt2.89□□□□□ -1.95
VPS35P34110 YDR209CYDR209C 414 nt2.89□□□□□ -1.95
VPS35P34110 tW(CCA)G1tW(CCA)G1 72 nt2.89□□□□□ -1.95
VPS35P34110 tW(CCA)G2tW(CCA)G2 72 nt2.89□□□□□ -1.95
VPS35P34110 tW(CCA)JtW(CCA)J 72 nt2.89□□□□□ -1.95
VPS35P34110 tW(CCA)KtW(CCA)K 72 nt2.89□□□□□ -1.95
VPS35P34110 tW(CCA)MtW(CCA)M 72 nt2.89□□□□□ -1.95
VPS35P34110 tW(CCA)PtW(CCA)P 72 nt2.89□□□□□ -1.95
VPS35P34110 YPR092WYPR092W 306 nt2.89□□□□□ -1.95
VPS35P34110 SEC26YDR238C 2922 nt2.89□□□□□ -1.95
VPS35P34110 PDR3YBL005W 2931 nt2.89□□□□□ -1.95
VPS35P34110 SLY1YDR189W 2001 nt2.88□□□□□ -1.95
VPS35P34110 MRD1YPR112C 2664 nt2.88□□□□□ -1.95
VPS35P34110 SEC7YDR170C 6030 nt2.88□□□□□ -1.95
VPS35P34110 snR72snR72 98 nt2.88□□□□□ -1.95
VPS35P34110 YIL174WYIL174W 228 nt2.88□□□□□ -1.95
VPS35P34110 YJL222W-AYJL222W-A 228 nt2.88□□□□□ -1.95
VPS35P34110 MPT5YGL178W 2580 nt2.88□□□□□ -1.95
VPS35P34110 YNL018CYNL018C 1839 nt2.87□□□□□ -1.95
VPS35P34110 AXL1YPR122W 3627 nt2.87□□□□□ -1.95
VPS35P34110 YRB1YDR002W 606 nt2.87□□□□□ -1.95
VPS35P34110 YLR140WYLR140W 327 nt2.87□□□□□ -1.95
VPS35P34110 PRP39YML046W 1890 nt2.86□□□□□ -1.95
VPS35P34110 NUM1YDR150W 8247 nt2.86□□□□□ -1.95
VPS35P34110 YCR043CYCR043C 384 nt2.86□□□□□ -1.95
VPS35P34110 YHR073W-AYHR073W-A 177 nt2.86□□□□□ -1.95
VPS35P34110 YBR182C-AYBR182C-A 195 nt2.86□□□□□ -1.95
VPS35P34110 SEC5YDR166C 2916 nt2.86□□□□□ -1.95
VPS35P34110 LYS14YDR034C 2373 nt2.85□□□□□ -1.95
VPS35P34110 VTC3YPL019C 2508 nt2.84□□□□□ -1.96
VPS35P34110 EMP24YGL200C 612 nt2.83□□□□□ -1.96
VPS35P34110 YHR071C-AYHR071C-A 321 nt2.83□□□□□ -1.96
VPS35P34110 PAU8YAL068C 363 nt2.83□□□□□ -1.96
VPS35P34110 PAU18YLL064C 363 nt2.83□□□□□ -1.96
VPS35P34110 PAU6YNR076W 363 nt2.83□□□□□ -1.96
VPS35P34110 PAU20YOL161C 363 nt2.83□□□□□ -1.96
VPS35P34110 YOR170WYOR170W 306 nt2.83□□□□□ -1.96
VPS35P34110 YOR376WYOR376W 369 nt2.83□□□□□ -1.96
VPS35P34110 PHO2YDL106C 1680 nt2.82□□□□□ -1.96
VPS35P34110 YKU70YMR284W 1809 nt2.82□□□□□ -1.96
VPS35P34110 NIP100YPL174C 2607 nt2.82□□□□□ -1.96
VPS35P34110 NEW1YPL226W 3591 nt2.82□□□□□ -1.96
VPS35P34110 snR74snR74 88 nt2.82□□□□□ -1.96
VPS35P34110 HYP2YEL034W 474 nt2.81□□□□□ -1.96
VPS35P34110 YMR194C-AYMR194C-A 225 nt2.81□□□□□ -1.96
VPS35P34110 YOR218CYOR218C 420 nt2.8□□□□□ -1.96
VPS35P34110 SPC98YNL126W 2541 nt2.8□□□□□ -1.96
VPS35P34110 ESL2YKR096W 3588 nt2.79□□□□□ -1.96
VPS35P34110 RPS27BYHR021C 249 nt2.79□□□□□ -1.96
VPS35P34110 YIR030W-AYIR030W-A 384 nt2.79□□□□□ -1.96
VPS35P34110 YNL097C-BYNL097C-B 123 nt2.79□□□□□ -1.96
VPS35P34110 YCL046WYCL046W 324 nt2.79□□□□□ -1.96
VPS35P34110 TUS1YLR425W 3924 nt2.79□□□□□ -1.96
VPS35P34110 SWA2YDR320C 2007 nt2.78□□□□□ -1.96
VPS35P34110 YHR032W-AYHR032W-A 180 nt2.78□□□□□ -1.96
VPS35P34110 SGF11YPL047W 300 nt2.78□□□□□ -1.96
VPS35P34110 TRS130YMR218C 3309 nt2.78□□□□□ -1.97
VPS35P34110 YGL217CYGL217C 342 nt2.77□□□□□ -1.97
VPS35P34110 CLN3YAL040C 1743 nt2.76□□□□□ -1.97
VPS35P34110 PDR1YGL013C 3207 nt2.76□□□□□ -1.97
VPS35P34110 UBR1YGR184C 5853 nt2.76□□□□□ -1.97
VPS35P34110 YBL012CYBL012C 402 nt2.76□□□□□ -1.97
VPS35P34110 MNE1YOR350C 1992 nt2.76□□□□□ -1.97
VPS35P34110 SMC6YLR383W 3345 nt2.75□□□□□ -1.97
VPS35P34110 MET18YIL128W 3099 nt2.75□□□□□ -1.97
VPS35P34110 SRO77YBL106C 3033 nt2.75□□□□□ -1.97
VPS35P34110 SRP14YDL092W 441 nt2.75□□□□□ -1.97
VPS35P34110 RPS29AYLR388W 171 nt2.75□□□□□ -1.97
VPS35P34110 ZRG17YNR039C 1818 nt2.75□□□□□ -1.97
VPS35P34110 NUP100YKL068W 2880 nt2.75□□□□□ -1.97
VPS35P34110 PDR11YIL013C 4236 nt2.74□□□□□ -1.97
VPS35P34110 FAR11YNL127W 2862 nt2.74□□□□□ -1.97
VPS35P34110 MRP10YDL045W-A 288 nt2.74□□□□□ -1.97
VPS35P34110 YNL170WYNL170W 396 nt2.74□□□□□ -1.97
VPS35P34110 YDR003W-AYDR003W-A 123 nt2.73□□□□□ -1.97
VPS35P34110 YBR131C-AYBR131C-A 90 nt2.73□□□□□ -1.97
VPS35P34110 snR46snR46 197 nt2.73□□□□□ -1.97
VPS35P34110 SPO75YLL005C 2607 nt2.73□□□□□ -1.97
VPS35P34110 YDR239CYDR239C 2364 nt2.73□□□□□ -1.97
VPS35P34110 YCR102W-AYCR102W-A 198 nt2.72□□□□□ -1.97
VPS35P34110 NUP170YBL079W 4509 nt2.72□□□□□ -1.97
VPS35P34110 TOP2YNL088W 4287 nt2.72□□□□□ -1.97
VPS35P34110 VPS8YAL002W 3825 nt2.72□□□□□ -1.97
VPS35P34110 MSC6YOR354C 2079 nt2.72□□□□□ -1.97
VPS35P34110 UBP15YMR304W 3693 nt2.71□□□□□ -1.98
VPS35P34110 ISW1YBR245C 3390 nt2.71□□□□□ -1.98
VPS35P34110 MCM10YIL150C 1716 nt2.71□□□□□ -1.98
VPS35P34110 TFC8YPL007C 1767 nt2.7□□□□□ -1.98
VPS35P34110 YLR154W-AYLR154W-A 186 nt2.7□□□□□ -1.98
VPS35P34110 SLN1YIL147C 3663 nt2.7□□□□□ -1.98
VPS35P34110 REV3YPL167C 4515 nt2.69□□□□□ -1.98
VPS35P34110 ECM12YHR021W-A 456 nt2.69□□□□□ -1.98
VPS35P34110 RPL34BYIL052C 366 nt2.69□□□□□ -1.98
VPS35P34110 NOP14YDL148C 2433 nt2.69□□□□□ -1.98
VPS35P34110 BNR1YIL159W 4128 nt2.69□□□□□ -1.98
VPS35P34110 ULI1YFR026C 510 nt2.68□□□□□ -1.98
VPS35P34110 ZIP1YDR285W 2628 nt2.68□□□□□ -1.98
VPS35P34110 RLM1YPL089C 2031 nt2.68□□□□□ -1.98
VPS35P34110 SPO21YOL091W 1830 nt2.68□□□□□ -1.98
VPS35P34110 snR52snR52 92 nt2.67□□□□□ -1.98
Retrieved 100 of 7,029 protein–RNA pairs in 52.6 ms