Protein–RNA interactions for Protein: P27999

RPB9, DNA-directed RNA polymerase II subunit RPB9, yeastyeast

Predictions only

Length 122 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RPB9P27999 AIM9YER080W 1884 nt1.26□□□□□ -2.21
RPB9P27999 SPO23YBR250W 1572 nt1.26□□□□□ -2.21
RPB9P27999 EFR3YMR212C 2349 nt1.26□□□□□ -2.21
RPB9P27999 WIP1YDR374W-A 270 nt1.26□□□□□ -2.21
RPB9P27999 YJL020W-AYJL020W-A 258 nt1.26□□□□□ -2.21
RPB9P27999 YKL083WYKL083W 615 nt1.26□□□□□ -2.21
RPB9P27999 HHT1YBR010W 411 nt1.26□□□□□ -2.21
RPB9P27999 IRR1YIL026C 3453 nt1.26□□□□□ -2.21
RPB9P27999 MDM20YOL076W 2391 nt1.26□□□□□ -2.21
RPB9P27999 PIP2YOR363C 2991 nt1.25□□□□□ -2.21
RPB9P27999 YIL059CYIL059C 366 nt1.25□□□□□ -2.21
RPB9P27999 HCH1YNL281W 462 nt1.25□□□□□ -2.21
RPB9P27999 YGR130CYGR130C 2451 nt1.25□□□□□ -2.21
RPB9P27999 SKI3YPR189W 4299 nt1.25□□□□□ -2.21
RPB9P27999 TDA9YML081W 3756 nt1.24□□□□□ -2.21
RPB9P27999 RPL31AYDL075W 342 nt1.24□□□□□ -2.21
RPB9P27999 YDR003W-AYDR003W-A 123 nt1.24□□□□□ -2.21
RPB9P27999 YGR174W-AYGR174W-A 87 nt1.24□□□□□ -2.21
RPB9P27999 YLR434CYLR434C 384 nt1.24□□□□□ -2.21
RPB9P27999 YPL229WYPL229W 621 nt1.24□□□□□ -2.21
RPB9P27999 SEC5YDR166C 2916 nt1.24□□□□□ -2.21
RPB9P27999 MLH3YPL164C 2148 nt1.24□□□□□ -2.21
RPB9P27999 SLY1YDR189W 2001 nt1.23□□□□□ -2.21
RPB9P27999 RPL26AYLR344W 384 nt1.23□□□□□ -2.21
RPB9P27999 YOP1YPR028W 543 nt1.23□□□□□ -2.21
RPB9P27999 PXA2YKL188C 2562 nt1.23□□□□□ -2.21
RPB9P27999 MSH5YDL154W 2706 nt1.23□□□□□ -2.21
RPB9P27999 YOR019WYOR019W 2193 nt1.23□□□□□ -2.21
RPB9P27999 LYS14YDR034C 2373 nt1.22□□□□□ -2.21
RPB9P27999 MON2YNL297C 4911 nt1.22□□□□□ -2.21
RPB9P27999 SRP14YDL092W 441 nt1.22□□□□□ -2.21
RPB9P27999 YAP6YDR259C 1152 nt1.22□□□□□ -2.21
RPB9P27999 RTR1YER139C 681 nt1.22□□□□□ -2.21
RPB9P27999 YHR138CYHR138C 345 nt1.22□□□□□ -2.21
RPB9P27999 PFD1YJL179W 330 nt1.22□□□□□ -2.21
RPB9P27999 BSC3YLR465C 309 nt1.22□□□□□ -2.21
RPB9P27999 SXM1YDR395W 2835 nt1.21□□□□□ -2.22
RPB9P27999 RKM1YPL208W 1752 nt1.21□□□□□ -2.22
RPB9P27999 YAL068W-AYAL068W-A 255 nt1.21□□□□□ -2.22
RPB9P27999 YOR293C-AYOR293C-A 150 nt1.21□□□□□ -2.22
RPB9P27999 YBR174CYBR174C 315 nt1.21□□□□□ -2.22
RPB9P27999 IRA1YBR140C 9279 nt1.21□□□□□ -2.22
RPB9P27999 SAS3YBL052C 2496 nt1.2□□□□□ -2.22
RPB9P27999 CYC7YEL039C 342 nt1.2□□□□□ -2.22
RPB9P27999 YML003WYML003W 873 nt1.2□□□□□ -2.22
RPB9P27999 ISF1YMR081C 1017 nt1.2□□□□□ -2.22
RPB9P27999 YPR170W-AYPR170W-A 186 nt1.2□□□□□ -2.22
RPB9P27999 RFX1YLR176C 2436 nt1.2□□□□□ -2.22
RPB9P27999 DGR2YKL121W 2559 nt1.2□□□□□ -2.22
RPB9P27999 SPO24YPR036W-A 204 nt1.19□□□□□ -2.22
RPB9P27999 YER137W-AYER137W-A 306 nt1.18□□□□□ -2.22
RPB9P27999 YMR230W-AYMR230W-A 189 nt1.18□□□□□ -2.22
RPB9P27999 RAD50YNL250W 3939 nt1.18□□□□□ -2.22
RPB9P27999 SPC110YDR356W 2835 nt1.17□□□□□ -2.22
RPB9P27999 SMC4YLR086W 4257 nt1.17□□□□□ -2.22
RPB9P27999 PAU2YEL049W 363 nt1.17□□□□□ -2.22
RPB9P27999 YHL041WYHL041W 450 nt1.17□□□□□ -2.22
RPB9P27999 YOR121CYOR121C 306 nt1.17□□□□□ -2.22
RPB9P27999 RPB10YOR210W 213 nt1.17□□□□□ -2.22
RPB9P27999 YLL032CYLL032C 2478 nt1.16□□□□□ -2.22
RPB9P27999 AI5_ALPHAQ0070 1893 nt1.16□□□□□ -2.22
RPB9P27999 BST1YFL025C 3090 nt1.16□□□□□ -2.22
RPB9P27999 EMC5YIL027C 426 nt1.16□□□□□ -2.22
RPB9P27999 MRPL31YKL138C 396 nt1.16□□□□□ -2.22
RPB9P27999 SDH2YLL041C 801 nt1.16□□□□□ -2.22
RPB9P27999 YLR140WYLR140W 327 nt1.16□□□□□ -2.22
RPB9P27999 MUK1YPL070W 1839 nt1.16□□□□□ -2.22
RPB9P27999 NCA2YPR155C 1851 nt1.16□□□□□ -2.22
RPB9P27999 HIT1YJR055W 495 nt1.15□□□□□ -2.23
RPB9P27999 COF1YLL050C 432 nt1.15□□□□□ -2.23
RPB9P27999 UPS1YLR193C 528 nt1.15□□□□□ -2.23
RPB9P27999 IRC23YOR044W 474 nt1.15□□□□□ -2.23
RPB9P27999 POL5YEL055C 3069 nt1.15□□□□□ -2.23
RPB9P27999 YLL054CYLL054C 2532 nt1.15□□□□□ -2.23
RPB9P27999 YNL284C-BYNL284C-B 5268 nt1.15□□□□□ -2.23
RPB9P27999 MVP1YMR004W 1536 nt1.15□□□□□ -2.23
RPB9P27999 ADR1YDR216W 3972 nt1.15□□□□□ -2.23
RPB9P27999 tH(GUG)E1tH(GUG)E1 72 nt1.14□□□□□ -2.23
RPB9P27999 tH(GUG)E2tH(GUG)E2 72 nt1.14□□□□□ -2.23
RPB9P27999 tH(GUG)G1tH(GUG)G1 72 nt1.14□□□□□ -2.23
RPB9P27999 tH(GUG)G2tH(GUG)G2 72 nt1.14□□□□□ -2.23
RPB9P27999 tH(GUG)HtH(GUG)H 72 nt1.14□□□□□ -2.23
RPB9P27999 tH(GUG)KtH(GUG)K 72 nt1.14□□□□□ -2.23
RPB9P27999 tH(GUG)MtH(GUG)M 72 nt1.14□□□□□ -2.23
RPB9P27999 YJL022WYJL022W 309 nt1.14□□□□□ -2.23
RPB9P27999 YNL058CYNL058C 951 nt1.14□□□□□ -2.23
RPB9P27999 YOR376WYOR376W 369 nt1.14□□□□□ -2.23
RPB9P27999 UFD2YDL190C 2886 nt1.14□□□□□ -2.23
RPB9P27999 PIG1YLR273C 1947 nt1.14□□□□□ -2.23
RPB9P27999 NOC3YLR002C 1992 nt1.14□□□□□ -2.23
RPB9P27999 SGO1YOR073W 1773 nt1.13□□□□□ -2.23
RPB9P27999 YDR118W-AYDR118W-A 117 nt1.13□□□□□ -2.23
RPB9P27999 YMR141W-AYMR141W-A 225 nt1.13□□□□□ -2.23
RPB9P27999 TIM18YOR297C 579 nt1.13□□□□□ -2.23
RPB9P27999 NUT2YPR168W 474 nt1.13□□□□□ -2.23
RPB9P27999 snR51snR51 107 nt1.13□□□□□ -2.23
RPB9P27999 IML1YJR138W 4755 nt1.12□□□□□ -2.23
RPB9P27999 PAC1YOR269W 1485 nt1.12□□□□□ -2.23
RPB9P27999 ALK1YGL021W 2283 nt1.12□□□□□ -2.23
RPB9P27999 PET127YOR017W 2403 nt1.12□□□□□ -2.23
Retrieved 100 of 7,029 protein–RNA pairs in 23.4 ms