Protein–RNA interactions for Protein: P25339

PUF4, Pumilio homology domain family member 4, yeastyeast

Known RBP RIP-Chip data

Length 888 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
PUF4P25339 YMR050CYMR050C 5268 nt2.81□□□□□ -1.96
PUF4P25339 YOL103W-BYOL103W-B 5268 nt2.81□□□□□ -1.96
PUF4P25339 YBR012W-BYBR012W-B 5271 nt2.81□□□□□ -1.96
PUF4P25339 YOR142W-BYOR142W-B 5268 nt2.81□□□□□ -1.96
PUF4P25339 YPL257W-BYPL257W-B 5268 nt2.81□□□□□ -1.96
PUF4P25339 YPR158W-BYPR158W-B 5271 nt2.81□□□□□ -1.96
PUF4P25339 MUK1YPL070W 1839 nt2.81□□□□□ -1.96
PUF4P25339 SPT21YMR179W 2277 nt2.81□□□□□ -1.96
PUF4P25339 UBP15YMR304W 3693 nt2.81□□□□□ -1.96
PUF4P25339 IRR1YIL026C 3453 nt2.8□□□□□ -1.96
PUF4P25339 PFF1YBR074W 2931 nt2.8□□□□□ -1.96
PUF4P25339 MPT5YGL178W 2580 nt2.8□□□□□ -1.96
PUF4P25339 YAL042C-AYAL042C-A 378 nt2.8□□□□□ -1.96
PUF4P25339 ACM1YPL267W 630 nt2.8□□□□□ -1.96
PUF4P25339 TUS1YLR425W 3924 nt2.79□□□□□ -1.96
PUF4P25339 YPL150WYPL150W 2706 nt2.79□□□□□ -1.96
PUF4P25339 SEC7YDR170C 6030 nt2.79□□□□□ -1.96 RIP-Chip
PUF4P25339 SWI6YLR182W 2412 nt2.79□□□□□ -1.96
PUF4P25339 ESL2YKR096W 3588 nt2.79□□□□□ -1.96
PUF4P25339 INP51YIL002C 2841 nt2.78□□□□□ -1.96
PUF4P25339 SGM1YJR134C 2124 nt2.78□□□□□ -1.96
PUF4P25339 SPO22YIL073C 2928 nt2.78□□□□□ -1.96
PUF4P25339 YGR050CYGR050C 357 nt2.78□□□□□ -1.96
PUF4P25339 SGF11YPL047W 300 nt2.78□□□□□ -1.96
PUF4P25339 INP2YMR163C 2118 nt2.78□□□□□ -1.96
PUF4P25339 SMY2YBR172C 2223 nt2.77□□□□□ -1.97
PUF4P25339 BPT1YLL015W 4680 nt2.77□□□□□ -1.97
PUF4P25339 EMC6YLL014W 327 nt2.77□□□□□ -1.97 RIP-Chip
PUF4P25339 YNL114CYNL114C 372 nt2.77□□□□□ -1.97 RIP-Chip
PUF4P25339 YOR161W-BYOR161W-B 261 nt2.77□□□□□ -1.97
PUF4P25339 YOR329W-AYOR329W-A 210 nt2.77□□□□□ -1.97
PUF4P25339 ZRG8YER033C 3231 nt2.77□□□□□ -1.97
PUF4P25339 CDC53YDL132W 2448 nt2.77□□□□□ -1.97
PUF4P25339 PRP8YHR165C 7242 nt2.76□□□□□ -1.97 RIP-Chip
PUF4P25339 CBF2YGR140W 2871 nt2.76□□□□□ -1.97
PUF4P25339 SNC1YAL030W 354 nt2.76□□□□□ -1.97
PUF4P25339 YNL018CYNL018C 1839 nt2.76□□□□□ -1.97
PUF4P25339 STB4YMR019W 2850 nt2.76□□□□□ -1.97
PUF4P25339 YIL080WYIL080W 4722 nt2.76□□□□□ -1.97
PUF4P25339 ESC1YMR219W 4977 nt2.76□□□□□ -1.97
PUF4P25339 PDR3YBL005W 2931 nt2.75□□□□□ -1.97
PUF4P25339 PRP42YDR235W 1635 nt2.75□□□□□ -1.97
PUF4P25339 RPH1YER169W 2391 nt2.75□□□□□ -1.97
PUF4P25339 TOP2YNL088W 4287 nt2.75□□□□□ -1.97
PUF4P25339 MOT1YPL082C 5604 nt2.75□□□□□ -1.97
PUF4P25339 YBL005W-BYBL005W-B 5268 nt2.75□□□□□ -1.97
PUF4P25339 ECM29YHL030W 5607 nt2.74□□□□□ -1.97
PUF4P25339 SLY1YDR189W 2001 nt2.73□□□□□ -1.97
PUF4P25339 SRO77YBL106C 3033 nt2.73□□□□□ -1.97
PUF4P25339 SMC6YLR383W 3345 nt2.73□□□□□ -1.97
PUF4P25339 SIR3YLR442C 2937 nt2.73□□□□□ -1.97
PUF4P25339 YKU80YMR106C 1890 nt2.73□□□□□ -1.97
PUF4P25339 VTC3YPL019C 2508 nt2.73□□□□□ -1.97 RIP-Chip
PUF4P25339 TOM1YDR457W 9807 nt2.73□□□□□ -1.97
PUF4P25339 RPL42BYHR141C 321 nt2.72□□□□□ -1.97
PUF4P25339 RPL42AYNL162W 321 nt2.72□□□□□ -1.97
PUF4P25339 MGM1YOR211C 2646 nt2.72□□□□□ -1.97
PUF4P25339 SLH1YGR271W 5904 nt2.72□□□□□ -1.97
PUF4P25339 YLL007CYLL007C 1998 nt2.72□□□□□ -1.97
PUF4P25339 SLM1YIL105C 2061 nt2.72□□□□□ -1.97
PUF4P25339 NIP100YPL174C 2607 nt2.72□□□□□ -1.97
PUF4P25339 BCK1YJL095W 4437 nt2.71□□□□□ -1.98
PUF4P25339 TRS130YMR218C 3309 nt2.71□□□□□ -1.98
PUF4P25339 PMP1YCR024C-A 123 nt2.71□□□□□ -1.98
PUF4P25339 YHR210CYHR210C 1026 nt2.71□□□□□ -1.98
PUF4P25339 RPO41YFL036W 4056 nt2.71□□□□□ -1.98
PUF4P25339 SEC26YDR238C 2922 nt2.7□□□□□ -1.98
PUF4P25339 SET2YJL168C 2202 nt2.7□□□□□ -1.98 RIP-Chip
PUF4P25339 RFX1YLR176C 2436 nt2.7□□□□□ -1.98
PUF4P25339 EDS1YBR033W 2760 nt2.7□□□□□ -1.98
PUF4P25339 PTP3YER075C 2787 nt2.69□□□□□ -1.98
PUF4P25339 snR72snR72 98 nt2.69□□□□□ -1.98
PUF4P25339 ULI1YFR026C 510 nt2.69□□□□□ -1.98
PUF4P25339 CLN3YAL040C 1743 nt2.68□□□□□ -1.98
PUF4P25339 NUP100YKL068W 2880 nt2.68□□□□□ -1.98
PUF4P25339 PDR1YGL013C 3207 nt2.68□□□□□ -1.98
PUF4P25339 YCR102W-AYCR102W-A 198 nt2.68□□□□□ -1.98
PUF4P25339 RPS29AYLR388W 171 nt2.68□□□□□ -1.98 RIP-Chip
PUF4P25339 RPB10YOR210W 213 nt2.68□□□□□ -1.98 RIP-Chip
PUF4P25339 SPO75YLL005C 2607 nt2.68□□□□□ -1.98
PUF4P25339 ECM12YHR021W-A 456 nt2.67□□□□□ -1.98
PUF4P25339 YIL071W-AYIL071W-A 477 nt2.67□□□□□ -1.98
PUF4P25339 SPC98YNL126W 2541 nt2.67□□□□□ -1.98
PUF4P25339 ATG11YPR049C 3537 nt2.67□□□□□ -1.98 RIP-Chip
PUF4P25339 SWI5YDR146C 2130 nt2.66□□□□□ -1.98
PUF4P25339 SNU13YEL026W 381 nt2.66□□□□□ -1.98
PUF4P25339 EMP24YGL200C 612 nt2.66□□□□□ -1.98
PUF4P25339 TFC8YPL007C 1767 nt2.65□□□□□ -1.99
PUF4P25339 YCR043CYCR043C 384 nt2.65□□□□□ -1.99
PUF4P25339 RPL33BYOR234C 324 nt2.65□□□□□ -1.99
PUF4P25339 FAR11YNL127W 2862 nt2.64□□□□□ -1.99
PUF4P25339 YOR055WYOR055W 435 nt2.64□□□□□ -1.99
PUF4P25339 YOR345CYOR345C 351 nt2.64□□□□□ -1.99
PUF4P25339 KRE33YNL132W 3171 nt2.64□□□□□ -1.99 RIP-Chip
PUF4P25339 ARP8YOR141C 2646 nt2.63□□□□□ -1.99
PUF4P25339 YEL073CYEL073C 324 nt2.63□□□□□ -1.99
PUF4P25339 YHR032W-AYHR032W-A 180 nt2.63□□□□□ -1.99
PUF4P25339 tW(CCA)G1tW(CCA)G1 72 nt2.63□□□□□ -1.99
PUF4P25339 tW(CCA)G2tW(CCA)G2 72 nt2.63□□□□□ -1.99
PUF4P25339 tW(CCA)JtW(CCA)J 72 nt2.63□□□□□ -1.99
Retrieved 100 of 7,029 protein–RNA pairs in 151.3 ms