Protein–RNA interactions for Protein: Q04487

SHH3, Mitochondrial inner membrane protein SHH3, yeastyeast

Predictions only

Length 196 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SHH3Q04487 YCL020WYCL020W 1317 nt0.78□□□□□ -2.28
SHH3Q04487 YHR214C-CYHR214C-C 1437 nt0.78□□□□□ -2.28
SHH3Q04487 SGO1YOR073W 1773 nt0.78□□□□□ -2.29
SHH3Q04487 HDA3YPR179C 1968 nt0.77□□□□□ -2.29
SHH3Q04487 IML1YJR138W 4755 nt0.77□□□□□ -2.29
SHH3Q04487 VPS54YDR027C 2670 nt0.77□□□□□ -2.29
SHH3Q04487 QCR7YDR529C 384 nt0.77□□□□□ -2.29
SHH3Q04487 YHR028W-AYHR028W-A 321 nt0.77□□□□□ -2.29
SHH3Q04487 YIR020CYIR020C 303 nt0.77□□□□□ -2.29
SHH3Q04487 YLR271WYLR271W 825 nt0.77□□□□□ -2.29
SHH3Q04487 GDS1YOR355W 1569 nt0.77□□□□□ -2.29
SHH3Q04487 UTP13YLR222C 2454 nt0.77□□□□□ -2.29
SHH3Q04487 YLL054CYLL054C 2532 nt0.77□□□□□ -2.29
SHH3Q04487 CDC24YAL041W 2565 nt0.77□□□□□ -2.29
SHH3Q04487 RPC10YHR143W-A 213 nt0.76□□□□□ -2.29
SHH3Q04487 BMT5YIL096C 1011 nt0.76□□□□□ -2.29
SHH3Q04487 RPL9BYNL067W 576 nt0.76□□□□□ -2.29
SHH3Q04487 SWS2YNL081C 432 nt0.76□□□□□ -2.29
SHH3Q04487 HCH1YNL281W 462 nt0.76□□□□□ -2.29
SHH3Q04487 ERP4YOR016C 624 nt0.76□□□□□ -2.29
SHH3Q04487 APL3YBL037W 3078 nt0.75□□□□□ -2.29
SHH3Q04487 SPT21YMR179W 2277 nt0.75□□□□□ -2.29
SHH3Q04487 SRP14YDL092W 441 nt0.75□□□□□ -2.29
SHH3Q04487 IRC23YOR044W 474 nt0.75□□□□□ -2.29
SHH3Q04487 YOP1YPR028W 543 nt0.75□□□□□ -2.29
SHH3Q04487 YGR130CYGR130C 2451 nt0.75□□□□□ -2.29
SHH3Q04487 SEC3YER008C 4011 nt0.74□□□□□ -2.29
SHH3Q04487 TTI1YKL033W 3117 nt0.74□□□□□ -2.29
SHH3Q04487 YDR003W-AYDR003W-A 123 nt0.74□□□□□ -2.29
SHH3Q04487 YML003WYML003W 873 nt0.74□□□□□ -2.29
SHH3Q04487 IPP1YBR011C 864 nt0.74□□□□□ -2.29
SHH3Q04487 YBR121C-AYBR121C-A 159 nt0.74□□□□□ -2.29
SHH3Q04487 PIP2YOR363C 2991 nt0.74□□□□□ -2.29
SHH3Q04487 BUD3YCL014W 4911 nt0.73□□□□□ -2.29
SHH3Q04487 DCP2YNL118C 2913 nt0.73□□□□□ -2.29
SHH3Q04487 snR9snR9 187 nt0.73□□□□□ -2.29
SHH3Q04487 SNO3YFL060C 669 nt0.73□□□□□ -2.29
SHH3Q04487 YLR198CYLR198C 360 nt0.73□□□□□ -2.29
SHH3Q04487 SNO2YNL334C 669 nt0.73□□□□□ -2.29
SHH3Q04487 PAU24YBR301W 363 nt0.73□□□□□ -2.29
SHH3Q04487 NUT1YGL151W 3399 nt0.73□□□□□ -2.29
SHH3Q04487 HNT1YDL125C 477 nt0.72□□□□□ -2.29
SHH3Q04487 SWI5YDR146C 2130 nt0.72□□□□□ -2.29
SHH3Q04487 YDR509WYDR509W 348 nt0.72□□□□□ -2.29
SHH3Q04487 YER188C-AYER188C-A 300 nt0.72□□□□□ -2.29
SHH3Q04487 SCEIQ0160 708 nt0.72□□□□□ -2.29
SHH3Q04487 YJR079WYJR079W 330 nt0.72□□□□□ -2.29
SHH3Q04487 YJR087WYJR087W 351 nt0.72□□□□□ -2.29
SHH3Q04487 YMR242W-AYMR242W-A 90 nt0.72□□□□□ -2.29
SHH3Q04487 KAP120YPL125W 3099 nt0.71□□□□□ -2.3
SHH3Q04487 snR83snR83 306 nt0.71□□□□□ -2.3
SHH3Q04487 ECM9YKR004C 1134 nt0.71□□□□□ -2.3
SHH3Q04487 NBP1YLR457C 960 nt0.71□□□□□ -2.3
SHH3Q04487 YPR099CYPR099C 357 nt0.71□□□□□ -2.3
SHH3Q04487 ZIP1YDR285W 2628 nt0.71□□□□□ -2.3
SHH3Q04487 YCS4YLR272C 3531 nt0.71□□□□□ -2.3
SHH3Q04487 YDL187CYDL187C 330 nt0.7□□□□□ -2.3
SHH3Q04487 DCP1YOL149W 696 nt0.7□□□□□ -2.3
SHH3Q04487 GRX5YPL059W 453 nt0.7□□□□□ -2.3
SHH3Q04487 PIG1YLR273C 1947 nt0.7□□□□□ -2.3
SHH3Q04487 PAN3YKL025C 2040 nt0.69□□□□□ -2.3
SHH3Q04487 YLR285C-AYLR285C-A 171 nt0.69□□□□□ -2.3
SHH3Q04487 NUT2YPR168W 474 nt0.69□□□□□ -2.3
SHH3Q04487 AFR1YDR085C 1863 nt0.69□□□□□ -2.3
SHH3Q04487 NUP145YGL092W 3954 nt0.69□□□□□ -2.3
SHH3Q04487 SAS3YBL052C 2496 nt0.69□□□□□ -2.3
SHH3Q04487 GUP1YGL084C 1683 nt0.69□□□□□ -2.3
SHH3Q04487 NOC3YLR002C 1992 nt0.68□□□□□ -2.3
SHH3Q04487 YPR117WYPR117W 7470 nt0.68□□□□□ -2.3
SHH3Q04487 YDR008CYDR008C 351 nt0.68□□□□□ -2.3
SHH3Q04487 YLR366WYLR366W 306 nt0.68□□□□□ -2.3
SHH3Q04487 YBR221W-AYBR221W-A 105 nt0.68□□□□□ -2.3
SHH3Q04487 MPT5YGL178W 2580 nt0.67□□□□□ -2.3
SHH3Q04487 AIM9YER080W 1884 nt0.67□□□□□ -2.3
SHH3Q04487 snR84snR84 550 nt0.67□□□□□ -2.3
SHH3Q04487 CYC7YEL039C 342 nt0.67□□□□□ -2.3
SHH3Q04487 ANS1YHR126C 480 nt0.67□□□□□ -2.3
SHH3Q04487 YIR018C-AYIR018C-A 138 nt0.67□□□□□ -2.3
SHH3Q04487 HIT1YJR055W 495 nt0.67□□□□□ -2.3
SHH3Q04487 YLR252WYLR252W 306 nt0.67□□□□□ -2.3
SHH3Q04487 YBR032WYBR032W 303 nt0.67□□□□□ -2.3
SHH3Q04487 MKT1YNL085W 2493 nt0.66□□□□□ -2.3
SHH3Q04487 TOF2YKR010C 2316 nt0.66□□□□□ -2.3
SHH3Q04487 YGR045CYGR045C 363 nt0.66□□□□□ -2.3
SHH3Q04487 SPO11YHL022C 1197 nt0.66□□□□□ -2.3
SHH3Q04487 SPO13YHR014W 876 nt0.66□□□□□ -2.3
SHH3Q04487 YJL047C-AYJL047C-A 135 nt0.66□□□□□ -2.3
SHH3Q04487 RUF22RUF22 515 nt0.66□□□□□ -2.3
SHH3Q04487 YNL050CYNL050C 813 nt0.66□□□□□ -2.3
SHH3Q04487 YBR012CYBR012C 420 nt0.66□□□□□ -2.3
SHH3Q04487 SET3YKR029C 2256 nt0.66□□□□□ -2.3
SHH3Q04487 AI5_ALPHAQ0070 1893 nt0.65□□□□□ -2.3
SHH3Q04487 YEL057CYEL057C 702 nt0.65□□□□□ -2.31
SHH3Q04487 PRM8YGL053W 714 nt0.65□□□□□ -2.31
SHH3Q04487 AFB1YLR040C 675 nt0.65□□□□□ -2.31
SHH3Q04487 GMC2YLR445W 567 nt0.65□□□□□ -2.31
SHH3Q04487 YMR175W-AYMR175W-A 195 nt0.65□□□□□ -2.31
SHH3Q04487 YBR071WYBR071W 636 nt0.65□□□□□ -2.31
SHH3Q04487 SLM6YBR266C 453 nt0.65□□□□□ -2.31
SHH3Q04487 LYS14YDR034C 2373 nt0.65□□□□□ -2.31
Retrieved 100 of 7,029 protein–RNA pairs in 40.4 ms