Protein–RNA interactions for Protein: P78363

ABCA4, Retinal-specific ATP-binding cassette transporter, humanhuman

Predictions only

Length 2,273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA4P78363 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC17.44■□□□□ 0.38
ABCA4P78363 CD177P1-201ENST00000606252 935 ntBASIC17.44■□□□□ 0.38
ABCA4P78363 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
ABCA4P78363 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
ABCA4P78363 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC17.43■□□□□ 0.38
ABCA4P78363 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
ABCA4P78363 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
ABCA4P78363 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC17.43■□□□□ 0.38
ABCA4P78363 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
ABCA4P78363 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC17.43■□□□□ 0.38
ABCA4P78363 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
ABCA4P78363 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
ABCA4P78363 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC17.43■□□□□ 0.38
ABCA4P78363 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC17.43■□□□□ 0.38
ABCA4P78363 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC17.43■□□□□ 0.38
ABCA4P78363 AC113410.3-201ENST00000623366 203 ntBASIC17.43■□□□□ 0.38
ABCA4P78363 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
ABCA4P78363 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
ABCA4P78363 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
ABCA4P78363 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
ABCA4P78363 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
ABCA4P78363 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
ABCA4P78363 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
ABCA4P78363 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC17.42■□□□□ 0.38
ABCA4P78363 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
ABCA4P78363 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
ABCA4P78363 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
ABCA4P78363 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC17.42■□□□□ 0.38
ABCA4P78363 AL049597.2-201ENST00000565575 961 ntBASIC17.42■□□□□ 0.38
ABCA4P78363 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
ABCA4P78363 EP400NL-214ENST00000641289 2402 ntBASIC17.42■□□□□ 0.38
ABCA4P78363 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
ABCA4P78363 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
ABCA4P78363 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC17.42■□□□□ 0.38
ABCA4P78363 AC133561.1-201ENST00000568600 2415 ntBASIC17.42■□□□□ 0.38
ABCA4P78363 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
ABCA4P78363 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
ABCA4P78363 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC17.42■□□□□ 0.38
ABCA4P78363 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
ABCA4P78363 RER1-204ENST00000378518 522 ntTSL 3 BASIC17.42■□□□□ 0.38
ABCA4P78363 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
ABCA4P78363 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
ABCA4P78363 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
ABCA4P78363 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
ABCA4P78363 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC17.42■□□□□ 0.38
ABCA4P78363 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
ABCA4P78363 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
ABCA4P78363 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
ABCA4P78363 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
ABCA4P78363 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
ABCA4P78363 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC17.41■□□□□ 0.38
ABCA4P78363 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC17.41■□□□□ 0.38
ABCA4P78363 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC17.41■□□□□ 0.38
ABCA4P78363 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
ABCA4P78363 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
ABCA4P78363 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
ABCA4P78363 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
ABCA4P78363 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
ABCA4P78363 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
ABCA4P78363 ANKRD54-201ENST00000215941 2184 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
ABCA4P78363 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC17.41■□□□□ 0.38
ABCA4P78363 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
ABCA4P78363 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
ABCA4P78363 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
ABCA4P78363 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
ABCA4P78363 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC17.41■□□□□ 0.38
ABCA4P78363 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC17.41■□□□□ 0.38
ABCA4P78363 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC17.41■□□□□ 0.38
ABCA4P78363 AC006557.6-201ENST00000623071 864 ntBASIC17.41■□□□□ 0.38
ABCA4P78363 AC092865.7-201ENST00000641832 219 ntBASIC17.41■□□□□ 0.38
ABCA4P78363 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
ABCA4P78363 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
ABCA4P78363 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
ABCA4P78363 KRT8P9-201ENST00000558927 1449 ntBASIC17.41■□□□□ 0.38
ABCA4P78363 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
ABCA4P78363 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
ABCA4P78363 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
ABCA4P78363 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC17.4■□□□□ 0.38
ABCA4P78363 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC17.4■□□□□ 0.38
ABCA4P78363 STK25-205ENST00000405883 1904 ntTSL 2 BASIC17.4■□□□□ 0.38
ABCA4P78363 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
ABCA4P78363 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
ABCA4P78363 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC17.4■□□□□ 0.38
ABCA4P78363 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC17.4■□□□□ 0.38
ABCA4P78363 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
ABCA4P78363 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC17.4■□□□□ 0.38
ABCA4P78363 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
ABCA4P78363 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
ABCA4P78363 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
ABCA4P78363 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
ABCA4P78363 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
ABCA4P78363 AC011484.1-201ENST00000377652 1995 ntBASIC17.4■□□□□ 0.38
ABCA4P78363 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
ABCA4P78363 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
ABCA4P78363 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC17.4■□□□□ 0.38
ABCA4P78363 NBPF21P-201ENST00000425093 1451 ntBASIC17.4■□□□□ 0.38
ABCA4P78363 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
ABCA4P78363 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
ABCA4P78363 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC17.4■□□□□ 0.38
ABCA4P78363 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC17.4■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 28.3 ms