Protein–RNA interactions for Protein: P40479

SDP1, Dual-specificity protein phosphatase SDP1, yeastyeast

Predictions only

Length 209 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SDP1P40479 RRP6YOR001W 2202 nt2.54□□□□□ -2
SDP1P40479 SSN2YDR443C 4263 nt2.54□□□□□ -2
SDP1P40479 INP2YMR163C 2118 nt2.54□□□□□ -2
SDP1P40479 SCH9YHR205W 2475 nt2.53□□□□□ -2
SDP1P40479 CRM1YGR218W 3255 nt2.53□□□□□ -2
SDP1P40479 YDR098C-BYDR098C-B 5268 nt2.53□□□□□ -2
SDP1P40479 YDR210C-DYDR210C-D 5268 nt2.53□□□□□ -2
SDP1P40479 YDR316W-BYDR316W-B 5268 nt2.53□□□□□ -2
SDP1P40479 YDR365W-BYDR365W-B 5268 nt2.53□□□□□ -2
SDP1P40479 YER138CYER138C 5268 nt2.53□□□□□ -2
SDP1P40479 YER160CYER160C 5268 nt2.53□□□□□ -2
SDP1P40479 YGR038C-BYGR038C-B 5268 nt2.53□□□□□ -2
SDP1P40479 YGR161C-DYGR161C-D 5268 nt2.53□□□□□ -2
SDP1P40479 YJR027WYJR027W 5268 nt2.53□□□□□ -2
SDP1P40479 YLR157C-BYLR157C-B 5268 nt2.53□□□□□ -2
SDP1P40479 YML039WYML039W 5268 nt2.53□□□□□ -2
SDP1P40479 YML045WYML045W 5268 nt2.53□□□□□ -2
SDP1P40479 YMR050CYMR050C 5268 nt2.53□□□□□ -2
SDP1P40479 YOL103W-BYOL103W-B 5268 nt2.53□□□□□ -2
SDP1P40479 YBR012W-BYBR012W-B 5271 nt2.53□□□□□ -2
SDP1P40479 YOR142W-BYOR142W-B 5268 nt2.53□□□□□ -2
SDP1P40479 YPL257W-BYPL257W-B 5268 nt2.53□□□□□ -2
SDP1P40479 YPR158W-BYPR158W-B 5271 nt2.53□□□□□ -2
SDP1P40479 YDR286CYDR286C 345 nt2.53□□□□□ -2
SDP1P40479 RRT15YLR162W-A 189 nt2.53□□□□□ -2
SDP1P40479 STB4YMR019W 2850 nt2.53□□□□□ -2
SDP1P40479 YME2YMR302C 2553 nt2.53□□□□□ -2.01
SDP1P40479 PRP39YML046W 1890 nt2.52□□□□□ -2.01
SDP1P40479 MUK1YPL070W 1839 nt2.52□□□□□ -2.01
SDP1P40479 MNL2YLR057W 2550 nt2.52□□□□□ -2.01
SDP1P40479 RPL23BYER117W 414 nt2.52□□□□□ -2.01
SDP1P40479 PNC1YGL037C 651 nt2.52□□□□□ -2.01
SDP1P40479 EMC6YLL014W 327 nt2.52□□□□□ -2.01
SDP1P40479 YNL114CYNL114C 372 nt2.52□□□□□ -2.01
SDP1P40479 VMR1YHL035C 4779 nt2.52□□□□□ -2.01
SDP1P40479 INP53YOR109W 3324 nt2.52□□□□□ -2.01
SDP1P40479 YIL174WYIL174W 228 nt2.51□□□□□ -2.01
SDP1P40479 YJL222W-AYJL222W-A 228 nt2.51□□□□□ -2.01
SDP1P40479 YBL083CYBL083C 426 nt2.51□□□□□ -2.01
SDP1P40479 SWI6YLR182W 2412 nt2.51□□□□□ -2.01
SDP1P40479 POL3YDL102W 3294 nt2.5□□□□□ -2.01
SDP1P40479 PFF1YBR074W 2931 nt2.5□□□□□ -2.01
SDP1P40479 YEL043WYEL043W 2871 nt2.5□□□□□ -2.01
SDP1P40479 YLR140WYLR140W 327 nt2.5□□□□□ -2.01
SDP1P40479 YPR092WYPR092W 306 nt2.5□□□□□ -2.01
SDP1P40479 HOS4YIL112W 3252 nt2.5□□□□□ -2.01
SDP1P40479 VPS54YDR027C 2670 nt2.5□□□□□ -2.01
SDP1P40479 RPH1YER169W 2391 nt2.5□□□□□ -2.01
SDP1P40479 INP51YIL002C 2841 nt2.5□□□□□ -2.01
SDP1P40479 YGR050CYGR050C 357 nt2.49□□□□□ -2.01
SDP1P40479 RPS22AYJL190C 393 nt2.49□□□□□ -2.01
SDP1P40479 RPB10YOR210W 213 nt2.49□□□□□ -2.01
SDP1P40479 SEC5YDR166C 2916 nt2.48□□□□□ -2.01
SDP1P40479 YMR194C-AYMR194C-A 225 nt2.48□□□□□ -2.01
SDP1P40479 snR43snR43 209 nt2.48□□□□□ -2.01
SDP1P40479 CAF120YNL278W 3183 nt2.48□□□□□ -2.01
SDP1P40479 CBF2YGR140W 2871 nt2.47□□□□□ -2.01
SDP1P40479 YNL170WYNL170W 396 nt2.47□□□□□ -2.01
SDP1P40479 AXL1YPR122W 3627 nt2.47□□□□□ -2.01
SDP1P40479 NFT1YKR103W 3657 nt2.47□□□□□ -2.01
SDP1P40479 YIL080WYIL080W 4722 nt2.46□□□□□ -2.02
SDP1P40479 NUM1YDR150W 8247 nt2.46□□□□□ -2.02
SDP1P40479 YKU80YMR106C 1890 nt2.46□□□□□ -2.02
SDP1P40479 BNR1YIL159W 4128 nt2.46□□□□□ -2.02
SDP1P40479 YOR394C-AYOR394C-A 168 nt2.46□□□□□ -2.02
SDP1P40479 YBR182C-AYBR182C-A 195 nt2.46□□□□□ -2.02
SDP1P40479 PHO2YDL106C 1680 nt2.46□□□□□ -2.02
SDP1P40479 SET2YJL168C 2202 nt2.46□□□□□ -2.02
SDP1P40479 AMS1YGL156W 3252 nt2.46□□□□□ -2.02
SDP1P40479 GIS1YDR096W 2685 nt2.45□□□□□ -2.02
SDP1P40479 SWI5YDR146C 2130 nt2.45□□□□□ -2.02
SDP1P40479 SMY2YBR172C 2223 nt2.45□□□□□ -2.02
SDP1P40479 RFX1YLR176C 2436 nt2.45□□□□□ -2.02
SDP1P40479 snR72snR72 98 nt2.45□□□□□ -2.02
SDP1P40479 YHR086W-AYHR086W-A 162 nt2.45□□□□□ -2.02
SDP1P40479 APC9YLR102C 798 nt2.45□□□□□ -2.02
SDP1P40479 YOR376WYOR376W 369 nt2.45□□□□□ -2.02
SDP1P40479 YLR278CYLR278C 4026 nt2.45□□□□□ -2.02
SDP1P40479 MGM1YOR211C 2646 nt2.45□□□□□ -2.02
SDP1P40479 MPT5YGL178W 2580 nt2.45□□□□□ -2.02
SDP1P40479 SLM1YIL105C 2061 nt2.45□□□□□ -2.02
SDP1P40479 CDC53YDL132W 2448 nt2.44□□□□□ -2.02
SDP1P40479 snR74snR74 88 nt2.44□□□□□ -2.02
SDP1P40479 YHR073W-AYHR073W-A 177 nt2.44□□□□□ -2.02
SDP1P40479 COX14YML129C 213 nt2.44□□□□□ -2.02
SDP1P40479 YKU70YMR284W 1809 nt2.44□□□□□ -2.02
SDP1P40479 SLY1YDR189W 2001 nt2.44□□□□□ -2.02
SDP1P40479 ISW1YBR245C 3390 nt2.44□□□□□ -2.02
SDP1P40479 YDR209CYDR209C 414 nt2.43□□□□□ -2.02
SDP1P40479 YBL005W-BYBL005W-B 5268 nt2.43□□□□□ -2.02
SDP1P40479 PTP3YER075C 2787 nt2.42□□□□□ -2.02
SDP1P40479 YGL217CYGL217C 342 nt2.42□□□□□ -2.02
SDP1P40479 YLR012CYLR012C 300 nt2.42□□□□□ -2.02
SDP1P40479 IRR1YIL026C 3453 nt2.42□□□□□ -2.02
SDP1P40479 TOP2YNL088W 4287 nt2.42□□□□□ -2.02
SDP1P40479 YOR296WYOR296W 3870 nt2.41□□□□□ -2.02
SDP1P40479 ZRG8YER033C 3231 nt2.41□□□□□ -2.02
SDP1P40479 YIR030W-AYIR030W-A 384 nt2.41□□□□□ -2.02
SDP1P40479 BCK1YJL095W 4437 nt2.4□□□□□ -2.02
SDP1P40479 YCR043CYCR043C 384 nt2.4□□□□□ -2.03
Retrieved 100 of 7,029 protein–RNA pairs in 40.2 ms