Protein–RNA interactions for Protein: P0C7V0

LINC00271, Putative uncharacterized protein encoded by LINC00271, humanhuman

Predictions only

Length 271 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00271P0C7V0 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
LINC00271P0C7V0 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
LINC00271P0C7V0 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC21.55■■□□□ 1.04
LINC00271P0C7V0 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
LINC00271P0C7V0 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC21.54■■□□□ 1.04
LINC00271P0C7V0 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC21.54■■□□□ 1.04
LINC00271P0C7V0 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC21.54■■□□□ 1.04
LINC00271P0C7V0 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC21.54■■□□□ 1.04
LINC00271P0C7V0 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC21.54■■□□□ 1.04
LINC00271P0C7V0 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
LINC00271P0C7V0 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC21.54■■□□□ 1.04
LINC00271P0C7V0 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC21.54■■□□□ 1.04
LINC00271P0C7V0 UNC93B2-201ENST00000285383 730 ntBASIC21.54■■□□□ 1.04
LINC00271P0C7V0 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
LINC00271P0C7V0 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
LINC00271P0C7V0 AC113347.1-201ENST00000413321 391 ntBASIC21.54■■□□□ 1.04
LINC00271P0C7V0 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC21.54■■□□□ 1.04
LINC00271P0C7V0 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
LINC00271P0C7V0 RBM42-202ENST00000586618 771 ntTSL 3 BASIC21.54■■□□□ 1.04
LINC00271P0C7V0 AL121906.2-201ENST00000621597 723 ntBASIC21.54■■□□□ 1.04
LINC00271P0C7V0 AL590326.2-201ENST00000625139 305 ntBASIC21.54■■□□□ 1.04
LINC00271P0C7V0 MIR2861-201ENST00000636310 90 ntBASIC21.54■■□□□ 1.04
LINC00271P0C7V0 AGAP1-202ENST00000336665 5427 ntAPPRIS P3 TSL 1 (best) BASIC21.54■■□□□ 1.04
LINC00271P0C7V0 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
LINC00271P0C7V0 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
LINC00271P0C7V0 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC21.54■■□□□ 1.04
LINC00271P0C7V0 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC21.54■■□□□ 1.04
LINC00271P0C7V0 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
LINC00271P0C7V0 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC21.54■■□□□ 1.04
LINC00271P0C7V0 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC21.54■■□□□ 1.04
LINC00271P0C7V0 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
LINC00271P0C7V0 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC21.54■■□□□ 1.04
LINC00271P0C7V0 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
LINC00271P0C7V0 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
LINC00271P0C7V0 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
LINC00271P0C7V0 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC21.53■■□□□ 1.04
LINC00271P0C7V0 AC116562.2-201ENST00000507042 360 ntBASIC21.53■■□□□ 1.04
LINC00271P0C7V0 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC21.53■■□□□ 1.04
LINC00271P0C7V0 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC21.53■■□□□ 1.04
LINC00271P0C7V0 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC21.53■■□□□ 1.04
LINC00271P0C7V0 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC21.53■■□□□ 1.04
LINC00271P0C7V0 AC010947.1-201ENST00000623454 693 ntBASIC21.53■■□□□ 1.04
LINC00271P0C7V0 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC21.53■■□□□ 1.04
LINC00271P0C7V0 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
LINC00271P0C7V0 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
LINC00271P0C7V0 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC21.53■■□□□ 1.04
LINC00271P0C7V0 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC21.53■■□□□ 1.04
LINC00271P0C7V0 GUSBP5-202ENST00000510805 1989 ntBASIC21.52■■□□□ 1.04
LINC00271P0C7V0 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
LINC00271P0C7V0 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC21.52■■□□□ 1.04
LINC00271P0C7V0 MIR1238-201ENST00000408483 83 ntBASIC21.52■■□□□ 1.04
LINC00271P0C7V0 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
LINC00271P0C7V0 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC21.52■■□□□ 1.04
LINC00271P0C7V0 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC21.52■■□□□ 1.04
LINC00271P0C7V0 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC21.52■■□□□ 1.04
LINC00271P0C7V0 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC21.52■■□□□ 1.04
LINC00271P0C7V0 AL031963.3-201ENST00000606441 850 ntBASIC21.52■■□□□ 1.04
LINC00271P0C7V0 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC21.52■■□□□ 1.04
LINC00271P0C7V0 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC21.52■■□□□ 1.03
LINC00271P0C7V0 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
LINC00271P0C7V0 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC21.51■■□□□ 1.03
LINC00271P0C7V0 PTBP1P-201ENST00000554374 1601 ntBASIC21.51■■□□□ 1.03
LINC00271P0C7V0 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC21.51■■□□□ 1.03
LINC00271P0C7V0 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
LINC00271P0C7V0 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC21.51■■□□□ 1.03
LINC00271P0C7V0 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
LINC00271P0C7V0 TERF1P1-201ENST00000311003 1181 ntBASIC21.51■■□□□ 1.03
LINC00271P0C7V0 AL390955.1-201ENST00000428694 934 ntBASIC21.51■■□□□ 1.03
LINC00271P0C7V0 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC21.51■■□□□ 1.03
LINC00271P0C7V0 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
LINC00271P0C7V0 FITM1-202ENST00000559294 800 ntBASIC21.51■■□□□ 1.03
LINC00271P0C7V0 TPM1-226ENST00000560959 925 ntTSL 2 BASIC21.51■■□□□ 1.03
LINC00271P0C7V0 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
LINC00271P0C7V0 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC21.51■■□□□ 1.03
LINC00271P0C7V0 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC21.51■■□□□ 1.03
LINC00271P0C7V0 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC21.51■■□□□ 1.03
LINC00271P0C7V0 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
LINC00271P0C7V0 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC21.51■■□□□ 1.03
LINC00271P0C7V0 ABL1-201ENST00000318560 5766 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
LINC00271P0C7V0 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
LINC00271P0C7V0 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
LINC00271P0C7V0 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC21.5■■□□□ 1.03
LINC00271P0C7V0 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC21.5■■□□□ 1.03
LINC00271P0C7V0 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
LINC00271P0C7V0 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC21.5■■□□□ 1.03
LINC00271P0C7V0 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
LINC00271P0C7V0 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC21.5■■□□□ 1.03
LINC00271P0C7V0 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC21.5■■□□□ 1.03
LINC00271P0C7V0 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC21.5■■□□□ 1.03
LINC00271P0C7V0 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC21.5■■□□□ 1.03
LINC00271P0C7V0 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
LINC00271P0C7V0 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
LINC00271P0C7V0 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
LINC00271P0C7V0 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC21.5■■□□□ 1.03
LINC00271P0C7V0 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
LINC00271P0C7V0 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC21.5■■□□□ 1.03
LINC00271P0C7V0 STAC-204ENST00000457375 1366 ntTSL 2 BASIC21.49■■□□□ 1.03
LINC00271P0C7V0 LINC01568-207ENST00000641790 1380 ntBASIC21.49■■□□□ 1.03
LINC00271P0C7V0 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC21.49■■□□□ 1.03
LINC00271P0C7V0 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC21.49■■□□□ 1.03
Retrieved 100 of 98,524 protein–RNA pairs in 26 ms