Protein–RNA interactions for Protein: O13535

TY1B-H, Transposon Ty1-H Gag-Pol polyprotein, yeastyeast

Predictions only

Length 1,793 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
TY1B-HO13535 ECM12YHR021W-A 456 nt0.42□□□□□ -2.34
TY1B-HO13535 IES4YOR189W 351 nt0.42□□□□□ -2.34
TY1B-HO13535 ROX1YPR065W 1107 nt0.42□□□□□ -2.34
TY1B-HO13535 RIM20YOR275C 1986 nt0.42□□□□□ -2.34
TY1B-HO13535 GDS1YOR355W 1569 nt0.42□□□□□ -2.34
TY1B-HO13535 SVP26YHR181W 687 nt0.42□□□□□ -2.34
TY1B-HO13535 SEC5YDR166C 2916 nt0.41□□□□□ -2.34
TY1B-HO13535 EDC1YGL222C 528 nt0.41□□□□□ -2.34
TY1B-HO13535 YKL183C-AYKL183C-A 213 nt0.41□□□□□ -2.34
TY1B-HO13535 NTF2YER009W 378 nt0.4□□□□□ -2.35
TY1B-HO13535 IRC19YLL033W 693 nt0.4□□□□□ -2.35
TY1B-HO13535 NUT1YGL151W 3399 nt0.4□□□□□ -2.35
TY1B-HO13535 LYS14YDR034C 2373 nt0.4□□□□□ -2.35
TY1B-HO13535 YLL054CYLL054C 2532 nt0.4□□□□□ -2.35
TY1B-HO13535 YDR194W-AYDR194W-A 153 nt0.4□□□□□ -2.35
TY1B-HO13535 YIR020CYIR020C 303 nt0.4□□□□□ -2.35
TY1B-HO13535 PHO80YOL001W 882 nt0.4□□□□□ -2.35
TY1B-HO13535 YPL080CYPL080C 327 nt0.4□□□□□ -2.35
TY1B-HO13535 VPS63YLR261C 327 nt0.39□□□□□ -2.35
TY1B-HO13535 SEC22YLR268W 645 nt0.39□□□□□ -2.35
TY1B-HO13535 SUS1YBR111W-A 291 nt0.39□□□□□ -2.35
TY1B-HO13535 YDR034C-CYDR034C-C 1317 nt0.39□□□□□ -2.35
TY1B-HO13535 YFL002W-BYFL002W-B 1317 nt0.39□□□□□ -2.35
TY1B-HO13535 YGR161W-AYGR161W-A 1317 nt0.39□□□□□ -2.35
TY1B-HO13535 YLR410W-AYLR410W-A 1317 nt0.39□□□□□ -2.35
TY1B-HO13535 YBL100W-AYBL100W-A 1317 nt0.39□□□□□ -2.35
TY1B-HO13535 YOR192C-AYOR192C-A 1317 nt0.39□□□□□ -2.35
TY1B-HO13535 YCL020WYCL020W 1317 nt0.39□□□□□ -2.35
TY1B-HO13535 KAR3YPR141C 2190 nt0.38□□□□□ -2.35
TY1B-HO13535 YDR248CYDR248C 582 nt0.38□□□□□ -2.35
TY1B-HO13535 YGL042CYGL042C 306 nt0.38□□□□□ -2.35
TY1B-HO13535 PSF2YJL072C 642 nt0.38□□□□□ -2.35
TY1B-HO13535 YOR169CYOR169C 465 nt0.38□□□□□ -2.35
TY1B-HO13535 snR45snR45 172 nt0.38□□□□□ -2.35
TY1B-HO13535 MPT5YGL178W 2580 nt0.38□□□□□ -2.35
TY1B-HO13535 SPT21YMR179W 2277 nt0.37□□□□□ -2.35
TY1B-HO13535 YDL068WYDL068W 330 nt0.37□□□□□ -2.35
TY1B-HO13535 GPX1YKL026C 504 nt0.37□□□□□ -2.35
TY1B-HO13535 IRC23YOR044W 474 nt0.37□□□□□ -2.35
TY1B-HO13535 RTC6YPL183W-A 282 nt0.37□□□□□ -2.35
TY1B-HO13535 ATP15YPL271W 189 nt0.37□□□□□ -2.35
TY1B-HO13535 SGD1YLR336C 2700 nt0.37□□□□□ -2.35
TY1B-HO13535 YDR003W-AYDR003W-A 123 nt0.37□□□□□ -2.35
TY1B-HO13535 RTR2YDR066C 591 nt0.37□□□□□ -2.35
TY1B-HO13535 RSM18YER050C 417 nt0.37□□□□□ -2.35
TY1B-HO13535 YMR158C-AYMR158C-A 138 nt0.37□□□□□ -2.35
TY1B-HO13535 DDR48YMR173W 1293 nt0.37□□□□□ -2.35
TY1B-HO13535 YBR012CYBR012C 420 nt0.37□□□□□ -2.35
TY1B-HO13535 TOF2YKR010C 2316 nt0.36□□□□□ -2.35
TY1B-HO13535 MXR1YER042W 555 nt0.35□□□□□ -2.35
TY1B-HO13535 RTR1YER139C 681 nt0.35□□□□□ -2.35
TY1B-HO13535 YER158W-AYER158W-A 216 nt0.35□□□□□ -2.35
TY1B-HO13535 CRG1YHR209W 876 nt0.35□□□□□ -2.35
TY1B-HO13535 YLL020CYLL020C 306 nt0.35□□□□□ -2.35
TY1B-HO13535 YOR105WYOR105W 327 nt0.35□□□□□ -2.35
TY1B-HO13535 NUT2YPR168W 474 nt0.35□□□□□ -2.35
TY1B-HO13535 snR44snR44 211 nt0.35□□□□□ -2.35
TY1B-HO13535 RUB1YDR139C 234 nt0.34□□□□□ -2.35
TY1B-HO13535 RMD6YEL072W 696 nt0.34□□□□□ -2.35
TY1B-HO13535 YJL026C-AYJL026C-A 222 nt0.34□□□□□ -2.35
TY1B-HO13535 HYM1YKL189W 1200 nt0.34□□□□□ -2.35
TY1B-HO13535 CMS1YLR003C 876 nt0.34□□□□□ -2.35
TY1B-HO13535 YPR172WYPR172W 603 nt0.34□□□□□ -2.35
TY1B-HO13535 NOC3YLR002C 1992 nt0.34□□□□□ -2.35
TY1B-HO13535 YDR509WYDR509W 348 nt0.34□□□□□ -2.36
TY1B-HO13535 YGR265WYGR265W 411 nt0.34□□□□□ -2.36
TY1B-HO13535 YOR282WYOR282W 321 nt0.34□□□□□ -2.36
TY1B-HO13535 URB1YKL014C 5295 nt0.34□□□□□ -2.36
TY1B-HO13535 NUP82YJL061W 2142 nt0.33□□□□□ -2.36
TY1B-HO13535 YDL196WYDL196W 330 nt0.33□□□□□ -2.36
TY1B-HO13535 RPL9AYGL147C 576 nt0.33□□□□□ -2.36
TY1B-HO13535 YLR163W-AYLR163W-A 114 nt0.33□□□□□ -2.36
TY1B-HO13535 NBP1YLR457C 960 nt0.33□□□□□ -2.36
TY1B-HO13535 RPL42BYHR141C 321 nt0.32□□□□□ -2.36
TY1B-HO13535 RPL42AYNL162W 321 nt0.32□□□□□ -2.36
TY1B-HO13535 DPB11YJL090C 2295 nt0.32□□□□□ -2.36
TY1B-HO13535 15S_rRNA15S_rRNA 1649 nt0.32□□□□□ -2.36
TY1B-HO13535 RPL29YFR032C-A 180 nt0.32□□□□□ -2.36
TY1B-HO13535 SPR2YOR214C 711 nt0.32□□□□□ -2.36
TY1B-HO13535 SCW11YGL028C 1629 nt0.32□□□□□ -2.36
TY1B-HO13535 MLP1YKR095W 5628 nt0.31□□□□□ -2.36
TY1B-HO13535 AIM44YPL158C 2277 nt0.31□□□□□ -2.36
TY1B-HO13535 ATG16YMR159C 453 nt0.31□□□□□ -2.36
TY1B-HO13535 YMR075C-AYMR075C-A 366 nt0.3□□□□□ -2.36
TY1B-HO13535 HDA3YPR179C 1968 nt0.3□□□□□ -2.36
TY1B-HO13535 BPH1YCR032W 6504 nt0.3□□□□□ -2.36
TY1B-HO13535 SWI5YDR146C 2130 nt0.3□□□□□ -2.36
TY1B-HO13535 VPS74YDR372C 1038 nt0.29□□□□□ -2.36
TY1B-HO13535 COX3Q0275 810 nt0.29□□□□□ -2.36
TY1B-HO13535 ESP1YGR098C 4893 nt0.29□□□□□ -2.36
TY1B-HO13535 DAD1YDR016C 285 nt0.29□□□□□ -2.36
TY1B-HO13535 DFG10YIL049W 762 nt0.29□□□□□ -2.36
TY1B-HO13535 ARV1YLR242C 966 nt0.29□□□□□ -2.36
TY1B-HO13535 RUF22RUF22 515 nt0.29□□□□□ -2.36
TY1B-HO13535 SAG1YJR004C 1953 nt0.28□□□□□ -2.36
TY1B-HO13535 YDR114CYDR114C 303 nt0.28□□□□□ -2.36
TY1B-HO13535 STO1YMR125W 2586 nt0.28□□□□□ -2.37
TY1B-HO13535 SLY1YDR189W 2001 nt0.28□□□□□ -2.37
TY1B-HO13535 snR59snR59 78 nt0.27□□□□□ -2.37
TY1B-HO13535 MET32YDR253C 576 nt0.27□□□□□ -2.37
Retrieved 100 of 7,029 protein–RNA pairs in 65.8 ms