Protein–RNA interactions for Protein: O43679

LDB2, LIM domain-binding protein 2, humanhuman

Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDB2O43679 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
LDB2O43679 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC20.3■□□□□ 0.84
LDB2O43679 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC20.3■□□□□ 0.84
LDB2O43679 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
LDB2O43679 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC20.3■□□□□ 0.84
LDB2O43679 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
LDB2O43679 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC20.3■□□□□ 0.84
LDB2O43679 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC20.3■□□□□ 0.84
LDB2O43679 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC20.3■□□□□ 0.84
LDB2O43679 AC105020.6-201ENST00000621523 1217 ntBASIC20.3■□□□□ 0.84
LDB2O43679 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
LDB2O43679 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
LDB2O43679 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
LDB2O43679 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC20.3■□□□□ 0.84
LDB2O43679 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
LDB2O43679 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC20.3■□□□□ 0.84
LDB2O43679 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC20.3■□□□□ 0.84
LDB2O43679 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC20.3■□□□□ 0.84
LDB2O43679 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
LDB2O43679 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC20.3■□□□□ 0.84
LDB2O43679 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
LDB2O43679 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
LDB2O43679 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
LDB2O43679 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
LDB2O43679 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
LDB2O43679 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC20.29■□□□□ 0.84
LDB2O43679 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC20.29■□□□□ 0.84
LDB2O43679 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
LDB2O43679 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
LDB2O43679 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC20.29■□□□□ 0.84
LDB2O43679 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC20.29■□□□□ 0.84
LDB2O43679 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC20.29■□□□□ 0.84
LDB2O43679 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC20.29■□□□□ 0.84
LDB2O43679 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
LDB2O43679 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
LDB2O43679 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
LDB2O43679 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
LDB2O43679 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
LDB2O43679 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
LDB2O43679 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
LDB2O43679 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
LDB2O43679 AC099778.1-201ENST00000568593 1911 ntBASIC20.28■□□□□ 0.84
LDB2O43679 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC20.28■□□□□ 0.84
LDB2O43679 USP39-204ENST00000409766 2033 ntTSL 2 BASIC20.28■□□□□ 0.84
LDB2O43679 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
LDB2O43679 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC20.28■□□□□ 0.84
LDB2O43679 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
LDB2O43679 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC20.28■□□□□ 0.84
LDB2O43679 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC20.28■□□□□ 0.84
LDB2O43679 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC20.28■□□□□ 0.84
LDB2O43679 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
LDB2O43679 DPP3P2-201ENST00000416030 1696 ntBASIC20.28■□□□□ 0.84
LDB2O43679 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
LDB2O43679 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
LDB2O43679 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
LDB2O43679 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
LDB2O43679 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC20.27■□□□□ 0.84
LDB2O43679 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC20.27■□□□□ 0.84
LDB2O43679 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
LDB2O43679 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC20.27■□□□□ 0.84
LDB2O43679 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
LDB2O43679 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC20.27■□□□□ 0.84
LDB2O43679 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.84
LDB2O43679 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
LDB2O43679 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
LDB2O43679 AF201337.1-201ENST00000520239 748 ntBASIC20.27■□□□□ 0.84
LDB2O43679 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC20.27■□□□□ 0.84
LDB2O43679 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
LDB2O43679 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC20.27■□□□□ 0.84
LDB2O43679 MARS-234ENST00000630571 216 ntTSL 5 BASIC20.27■□□□□ 0.84
LDB2O43679 MARS-235ENST00000630803 183 ntTSL 3 BASIC20.27■□□□□ 0.84
LDB2O43679 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
LDB2O43679 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC20.27■□□□□ 0.84
LDB2O43679 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC20.27■□□□□ 0.84
LDB2O43679 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC20.27■□□□□ 0.84
LDB2O43679 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.83
LDB2O43679 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
LDB2O43679 KRT17P1-201ENST00000399211 1546 ntBASIC20.27■□□□□ 0.83
LDB2O43679 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
LDB2O43679 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC20.26■□□□□ 0.83
LDB2O43679 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC20.26■□□□□ 0.83
LDB2O43679 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC20.26■□□□□ 0.83
LDB2O43679 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
LDB2O43679 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC20.26■□□□□ 0.83
LDB2O43679 METTL15-202ENST00000403099 795 ntTSL 5 BASIC20.26■□□□□ 0.83
LDB2O43679 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC20.26■□□□□ 0.83
LDB2O43679 AC105036.2-201ENST00000569468 176 ntBASIC20.26■□□□□ 0.83
LDB2O43679 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC20.26■□□□□ 0.83
LDB2O43679 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC20.26■□□□□ 0.83
LDB2O43679 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
LDB2O43679 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
LDB2O43679 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
LDB2O43679 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
LDB2O43679 AL391422.3-201ENST00000603791 2761 ntBASIC20.26■□□□□ 0.83
LDB2O43679 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
LDB2O43679 H19-201ENST00000411754 1788 ntTSL 5 BASIC20.26■□□□□ 0.83
LDB2O43679 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
LDB2O43679 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
LDB2O43679 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC20.26■□□□□ 0.83
LDB2O43679 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC20.26■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 56.8 ms