Protein–RNA interactions for Protein: P39967

UBP9, Ubiquitin carboxyl-terminal hydrolase 9, yeastyeast

Predictions only

Length 754 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
UBP9P39967 PCA1YBR295W 3651 nt4.64□□□□□ -1.67
UBP9P39967 SUP56tL(CAA)A 82 nt4.64□□□□□ -1.67
UBP9P39967 SUP53tL(CAA)C 82 nt4.64□□□□□ -1.67
UBP9P39967 tL(CAA)DtL(CAA)D 82 nt4.64□□□□□ -1.67
UBP9P39967 tL(CAA)G1tL(CAA)G1 82 nt4.64□□□□□ -1.67
UBP9P39967 SUP54tL(CAA)G2 82 nt4.64□□□□□ -1.67
UBP9P39967 tL(CAA)G3tL(CAA)G3 82 nt4.64□□□□□ -1.67
UBP9P39967 tL(CAA)KtL(CAA)K 82 nt4.64□□□□□ -1.67
UBP9P39967 tL(CAA)LtL(CAA)L 82 nt4.64□□□□□ -1.67
UBP9P39967 tL(CAA)MtL(CAA)M 82 nt4.64□□□□□ -1.67
UBP9P39967 tL(CAA)NtL(CAA)N 82 nt4.64□□□□□ -1.67
UBP9P39967 YBL065WYBL065W 345 nt4.64□□□□□ -1.67
UBP9P39967 snR43snR43 209 nt4.64□□□□□ -1.67
UBP9P39967 PUF4YGL014W 2667 nt4.64□□□□□ -1.67
UBP9P39967 COG6YNL041C 2520 nt4.64□□□□□ -1.67
UBP9P39967 SUM1YDR310C 3189 nt4.63□□□□□ -1.67
UBP9P39967 SLM1YIL105C 2061 nt4.63□□□□□ -1.67
UBP9P39967 MNL1YHR204W 2391 nt4.63□□□□□ -1.67
UBP9P39967 SWI6YLR182W 2412 nt4.63□□□□□ -1.67
UBP9P39967 MBP1YDL056W 2502 nt4.63□□□□□ -1.67
UBP9P39967 FZO1YBR179C 2568 nt4.62□□□□□ -1.67
UBP9P39967 GAL4YPL248C 2646 nt4.62□□□□□ -1.67
UBP9P39967 MEF2YJL102W 2460 nt4.62□□□□□ -1.67
UBP9P39967 IRC8YJL051W 2469 nt4.62□□□□□ -1.67
UBP9P39967 YML116W-AYML116W-A 303 nt4.61□□□□□ -1.67
UBP9P39967 YOR108C-AYOR108C-A 210 nt4.61□□□□□ -1.67
UBP9P39967 YOL075CYOL075C 3885 nt4.61□□□□□ -1.67
UBP9P39967 SOK1YDR006C 2706 nt4.6□□□□□ -1.67
UBP9P39967 KAP114YGL241W 3015 nt4.6□□□□□ -1.67
UBP9P39967 RPL42BYHR141C 321 nt4.6□□□□□ -1.67
UBP9P39967 YMR324CYMR324C 243 nt4.6□□□□□ -1.67
UBP9P39967 UBP10YNL186W 2379 nt4.6□□□□□ -1.67
UBP9P39967 PAU3YCR104W 375 nt4.59□□□□□ -1.67
UBP9P39967 YHR032C-AYHR032C-A 120 nt4.59□□□□□ -1.67
UBP9P39967 YIL058WYIL058W 285 nt4.59□□□□□ -1.67
UBP9P39967 ISA1YLL027W 753 nt4.58□□□□□ -1.68
UBP9P39967 STB6YKL072W 2301 nt4.58□□□□□ -1.68
UBP9P39967 MMS4YBR098W 2076 nt4.58□□□□□ -1.68
UBP9P39967 ALR2YFL050C 2577 nt4.58□□□□□ -1.68
UBP9P39967 YDR261C-DYDR261C-D 4815 nt4.57□□□□□ -1.68
UBP9P39967 AIM44YPL158C 2277 nt4.57□□□□□ -1.68
UBP9P39967 RPG1YBR079C 2895 nt4.57□□□□□ -1.68
UBP9P39967 YGR266WYGR266W 2106 nt4.57□□□□□ -1.68
UBP9P39967 IOC3YFR013W 2364 nt4.57□□□□□ -1.68
UBP9P39967 PRP5YBR237W 2550 nt4.56□□□□□ -1.68
UBP9P39967 YNR065CYNR065C 3351 nt4.55□□□□□ -1.68
UBP9P39967 SIN4YNL236W 2925 nt4.55□□□□□ -1.68
UBP9P39967 YCR038W-AYCR038W-A 126 nt4.55□□□□□ -1.68
UBP9P39967 YDL159W-AYDL159W-A 132 nt4.55□□□□□ -1.68
UBP9P39967 YHR032W-AYHR032W-A 180 nt4.55□□□□□ -1.68
UBP9P39967 YLR286W-AYLR286W-A 135 nt4.55□□□□□ -1.68
UBP9P39967 VHC1YBR235W 3363 nt4.54□□□□□ -1.68
UBP9P39967 SWI5YDR146C 2130 nt4.53□□□□□ -1.68
UBP9P39967 YJL120WYJL120W 324 nt4.53□□□□□ -1.68
UBP9P39967 GDE1YPL110C 3672 nt4.53□□□□□ -1.68
UBP9P39967 KIC1YHR102W 3243 nt4.53□□□□□ -1.68
UBP9P39967 EMC5YIL027C 426 nt4.52□□□□□ -1.69
UBP9P39967 YKL162C-AYKL162C-A 153 nt4.52□□□□□ -1.69
UBP9P39967 BRO1YPL084W 2535 nt4.52□□□□□ -1.69
UBP9P39967 MTR10YOR160W 2919 nt4.52□□□□□ -1.69
UBP9P39967 TRZ1YKR079C 2517 nt4.51□□□□□ -1.69
UBP9P39967 HOT1YMR172W 2160 nt4.51□□□□□ -1.69
UBP9P39967 RPS30BYOR182C 192 nt4.51□□□□□ -1.69
UBP9P39967 CDH1YGL003C 1701 nt4.51□□□□□ -1.69
UBP9P39967 NIP100YPL174C 2607 nt4.51□□□□□ -1.69
UBP9P39967 COP1YDL145C 3606 nt4.5□□□□□ -1.69
UBP9P39967 CCM1YGR150C 2595 nt4.5□□□□□ -1.69
UBP9P39967 FMP16YDR070C 282 nt4.5□□□□□ -1.69
UBP9P39967 NUP120YKL057C 3114 nt4.5□□□□□ -1.69
UBP9P39967 FAT1YBR041W 2010 nt4.5□□□□□ -1.69
UBP9P39967 CYM1YDR430C 2970 nt4.49□□□□□ -1.69
UBP9P39967 SPC98YNL126W 2541 nt4.49□□□□□ -1.69
UBP9P39967 FUN12YAL035W 3009 nt4.49□□□□□ -1.69
UBP9P39967 BOI2YER114C 3123 nt4.48□□□□□ -1.69
UBP9P39967 EGT2YNL327W 3126 nt4.48□□□□□ -1.69
UBP9P39967 MDR1YGR100W 2853 nt4.48□□□□□ -1.69
UBP9P39967 ECM32YER176W 3366 nt4.48□□□□□ -1.69
UBP9P39967 LSO2YGR169C-A 279 nt4.48□□□□□ -1.69
UBP9P39967 YKL225WYKL225W 348 nt4.48□□□□□ -1.69
UBP9P39967 RPL23AYBL087C 414 nt4.48□□□□□ -1.69
UBP9P39967 ARO80YDR421W 2853 nt4.48□□□□□ -1.69
UBP9P39967 DIA2YOR080W 2199 nt4.47□□□□□ -1.69
UBP9P39967 KCC4YCL024W 3114 nt4.47□□□□□ -1.69
UBP9P39967 DOT6YER088C 2013 nt4.47□□□□□ -1.69
UBP9P39967 PAU13YHL046C 363 nt4.47□□□□□ -1.69
UBP9P39967 RSC1YGR056W 2787 nt4.47□□□□□ -1.69
UBP9P39967 BIR1YJR089W 2865 nt4.47□□□□□ -1.69
UBP9P39967 PNC1YGL037C 651 nt4.46□□□□□ -1.7
UBP9P39967 RPL14AYKL006W 417 nt4.46□□□□□ -1.7
UBP9P39967 COX12YLR038C 252 nt4.46□□□□□ -1.7
UBP9P39967 RPL42AYNL162W 321 nt4.46□□□□□ -1.7
UBP9P39967 YPR108W-AYPR108W-A 213 nt4.46□□□□□ -1.7
UBP9P39967 GIS4YML006C 2325 nt4.46□□□□□ -1.7
UBP9P39967 TFC1YBR123C 1950 nt4.45□□□□□ -1.7
UBP9P39967 YCR043CYCR043C 384 nt4.45□□□□□ -1.7
UBP9P39967 RPS25BYLR333C 327 nt4.45□□□□□ -1.7
UBP9P39967 PEP5YMR231W 3090 nt4.45□□□□□ -1.7
UBP9P39967 RTT107YHR154W 3213 nt4.45□□□□□ -1.7
UBP9P39967 YAT2YER024W 2772 nt4.44□□□□□ -1.7
UBP9P39967 UPC2YDR213W 2742 nt4.44□□□□□ -1.7
Retrieved 100 of 7,029 protein–RNA pairs in 15.5 ms