Protein–RNA interactions for Protein: P08123

COL1A2, Collagen alpha-2(I) chain, humanhuman

Predictions only

Length 1,366 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A2P08123 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC22.4■■□□□ 1.18
COL1A2P08123 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
COL1A2P08123 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC22.4■■□□□ 1.18
COL1A2P08123 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC22.4■■□□□ 1.18
COL1A2P08123 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC22.4■■□□□ 1.18
COL1A2P08123 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC22.4■■□□□ 1.18
COL1A2P08123 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC22.4■■□□□ 1.18
COL1A2P08123 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
COL1A2P08123 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC22.4■■□□□ 1.18
COL1A2P08123 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC22.4■■□□□ 1.18
COL1A2P08123 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC22.4■■□□□ 1.18
COL1A2P08123 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC22.4■■□□□ 1.18
COL1A2P08123 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC22.4■■□□□ 1.18
COL1A2P08123 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
COL1A2P08123 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC22.4■■□□□ 1.18
COL1A2P08123 MME-217ENST00000616757 1315 ntTSL 5 BASIC22.4■■□□□ 1.18
COL1A2P08123 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC22.4■■□□□ 1.18
COL1A2P08123 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC22.4■■□□□ 1.18
COL1A2P08123 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC22.4■■□□□ 1.18
COL1A2P08123 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC22.39■■□□□ 1.18
COL1A2P08123 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.18
COL1A2P08123 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC22.39■■□□□ 1.18
COL1A2P08123 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC22.39■■□□□ 1.18
COL1A2P08123 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC22.39■■□□□ 1.18
COL1A2P08123 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC22.39■■□□□ 1.18
COL1A2P08123 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC22.39■■□□□ 1.18
COL1A2P08123 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC22.39■■□□□ 1.18
COL1A2P08123 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC22.39■■□□□ 1.18
COL1A2P08123 AC008550.1-201ENST00000511500 884 ntBASIC22.39■■□□□ 1.18
COL1A2P08123 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.18
COL1A2P08123 AC079834.2-201ENST00000609776 1949 ntBASIC22.39■■□□□ 1.18
COL1A2P08123 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.18
COL1A2P08123 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.18
COL1A2P08123 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.18
COL1A2P08123 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC22.39■■□□□ 1.18
COL1A2P08123 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC22.39■■□□□ 1.17
COL1A2P08123 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC22.39■■□□□ 1.17
COL1A2P08123 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC22.39■■□□□ 1.17
COL1A2P08123 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC22.39■■□□□ 1.17
COL1A2P08123 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
COL1A2P08123 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
COL1A2P08123 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
COL1A2P08123 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC22.38■■□□□ 1.17
COL1A2P08123 ISG20-202ENST00000379224 540 ntTSL 3 BASIC22.38■■□□□ 1.17
COL1A2P08123 ERF-202ENST00000440177 2032 ntTSL 2 BASIC22.38■■□□□ 1.17
COL1A2P08123 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
COL1A2P08123 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC22.38■■□□□ 1.17
COL1A2P08123 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC22.38■■□□□ 1.17
COL1A2P08123 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC22.38■■□□□ 1.17
COL1A2P08123 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
COL1A2P08123 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC22.38■■□□□ 1.17
COL1A2P08123 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC22.38■■□□□ 1.17
COL1A2P08123 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC22.38■■□□□ 1.17
COL1A2P08123 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC22.38■■□□□ 1.17
COL1A2P08123 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
COL1A2P08123 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
COL1A2P08123 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC22.38■■□□□ 1.17
COL1A2P08123 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC22.38■■□□□ 1.17
COL1A2P08123 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
COL1A2P08123 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC22.38■■□□□ 1.17
COL1A2P08123 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC22.38■■□□□ 1.17
COL1A2P08123 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
COL1A2P08123 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC22.38■■□□□ 1.17
COL1A2P08123 AC133681.1-201ENST00000465482 601 ntBASIC22.38■■□□□ 1.17
COL1A2P08123 RPS2P4-201ENST00000476944 856 ntBASIC22.38■■□□□ 1.17
COL1A2P08123 HES2-206ENST00000489730 730 ntTSL 2 BASIC22.38■■□□□ 1.17
COL1A2P08123 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC22.38■■□□□ 1.17
COL1A2P08123 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
COL1A2P08123 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC22.38■■□□□ 1.17
COL1A2P08123 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC22.38■■□□□ 1.17
COL1A2P08123 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
COL1A2P08123 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC22.38■■□□□ 1.17
COL1A2P08123 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
COL1A2P08123 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC22.37■■□□□ 1.17
COL1A2P08123 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC22.37■■□□□ 1.17
COL1A2P08123 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC22.37■■□□□ 1.17
COL1A2P08123 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
COL1A2P08123 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
COL1A2P08123 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
COL1A2P08123 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC22.37■■□□□ 1.17
COL1A2P08123 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
COL1A2P08123 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
COL1A2P08123 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
COL1A2P08123 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC22.37■■□□□ 1.17
COL1A2P08123 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
COL1A2P08123 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC22.37■■□□□ 1.17
COL1A2P08123 THEM4-205ENST00000489410 643 ntTSL 2 BASIC22.37■■□□□ 1.17
COL1A2P08123 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC22.37■■□□□ 1.17
COL1A2P08123 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC22.37■■□□□ 1.17
COL1A2P08123 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC22.37■■□□□ 1.17
COL1A2P08123 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
COL1A2P08123 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC22.37■■□□□ 1.17
COL1A2P08123 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC22.37■■□□□ 1.17
COL1A2P08123 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC22.36■■□□□ 1.17
COL1A2P08123 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC22.36■■□□□ 1.17
COL1A2P08123 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC22.36■■□□□ 1.17
COL1A2P08123 PLK5-205ENST00000642079 1969 ntBASIC22.36■■□□□ 1.17
COL1A2P08123 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC22.36■■□□□ 1.17
COL1A2P08123 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC22.36■■□□□ 1.17
COL1A2P08123 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
Retrieved 100 of 98,524 protein–RNA pairs in 41 ms