Protein–RNA interactions for Protein: Q96BQ3

TRIM43, Tripartite motif-containing protein 43, humanhuman

Predicted RBP Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM43Q96BQ3 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC22.32■■□□□ 1.16
TRIM43Q96BQ3 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC22.32■■□□□ 1.16
TRIM43Q96BQ3 AL031963.3-201ENST00000606441 850 ntBASIC22.32■■□□□ 1.16
TRIM43Q96BQ3 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC22.32■■□□□ 1.16
TRIM43Q96BQ3 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
TRIM43Q96BQ3 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC22.32■■□□□ 1.16
TRIM43Q96BQ3 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
TRIM43Q96BQ3 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC22.32■■□□□ 1.16
TRIM43Q96BQ3 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC22.31■■□□□ 1.16
TRIM43Q96BQ3 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
TRIM43Q96BQ3 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC22.31■■□□□ 1.16
TRIM43Q96BQ3 AL137013.1-201ENST00000432946 1228 ntBASIC22.31■■□□□ 1.16
TRIM43Q96BQ3 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
TRIM43Q96BQ3 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC22.31■■□□□ 1.16
TRIM43Q96BQ3 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC22.31■■□□□ 1.16
TRIM43Q96BQ3 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
TRIM43Q96BQ3 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC22.31■■□□□ 1.16
TRIM43Q96BQ3 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
TRIM43Q96BQ3 AC124283.5-201ENST00000624661 1809 ntBASIC22.31■■□□□ 1.16
TRIM43Q96BQ3 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC22.31■■□□□ 1.16
TRIM43Q96BQ3 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
TRIM43Q96BQ3 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC22.31■■□□□ 1.16
TRIM43Q96BQ3 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC22.3■■□□□ 1.16
TRIM43Q96BQ3 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC22.3■■□□□ 1.16
TRIM43Q96BQ3 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC22.3■■□□□ 1.16
TRIM43Q96BQ3 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
TRIM43Q96BQ3 AL390955.1-201ENST00000428694 934 ntBASIC22.3■■□□□ 1.16
TRIM43Q96BQ3 DUX4L26-201ENST00000489078 1255 ntBASIC22.3■■□□□ 1.16
TRIM43Q96BQ3 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC22.3■■□□□ 1.16
TRIM43Q96BQ3 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC22.3■■□□□ 1.16
TRIM43Q96BQ3 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC22.3■■□□□ 1.16
TRIM43Q96BQ3 AC010947.1-201ENST00000623454 693 ntBASIC22.3■■□□□ 1.16
TRIM43Q96BQ3 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC22.3■■□□□ 1.16
TRIM43Q96BQ3 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
TRIM43Q96BQ3 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC22.3■■□□□ 1.16
TRIM43Q96BQ3 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
TRIM43Q96BQ3 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
TRIM43Q96BQ3 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC22.29■■□□□ 1.16
TRIM43Q96BQ3 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC22.29■■□□□ 1.16
TRIM43Q96BQ3 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC22.29■■□□□ 1.16
TRIM43Q96BQ3 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
TRIM43Q96BQ3 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
TRIM43Q96BQ3 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC22.29■■□□□ 1.16
TRIM43Q96BQ3 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC22.29■■□□□ 1.16
TRIM43Q96BQ3 NAPSB-206ENST00000562112 1266 ntBASIC22.29■■□□□ 1.16
TRIM43Q96BQ3 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC22.29■■□□□ 1.16
TRIM43Q96BQ3 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC22.29■■□□□ 1.16
TRIM43Q96BQ3 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
TRIM43Q96BQ3 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
TRIM43Q96BQ3 KRT18P22-201ENST00000402024 1347 ntBASIC22.29■■□□□ 1.16
TRIM43Q96BQ3 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
TRIM43Q96BQ3 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC22.28■■□□□ 1.16
TRIM43Q96BQ3 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC22.28■■□□□ 1.16
TRIM43Q96BQ3 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
TRIM43Q96BQ3 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC22.28■■□□□ 1.16
TRIM43Q96BQ3 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
TRIM43Q96BQ3 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
TRIM43Q96BQ3 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC22.28■■□□□ 1.16
TRIM43Q96BQ3 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
TRIM43Q96BQ3 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC22.27■■□□□ 1.16
TRIM43Q96BQ3 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
TRIM43Q96BQ3 PACS2-201ENST00000325438 3708 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
TRIM43Q96BQ3 GALNT12-201ENST00000375011 2735 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
TRIM43Q96BQ3 JAG2-202ENST00000347004 5720 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
TRIM43Q96BQ3 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
TRIM43Q96BQ3 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC22.27■■□□□ 1.16
TRIM43Q96BQ3 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC22.27■■□□□ 1.16
TRIM43Q96BQ3 SLC25A3P1-201ENST00000443844 931 ntBASIC22.27■■□□□ 1.16
TRIM43Q96BQ3 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC22.27■■□□□ 1.16
TRIM43Q96BQ3 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC22.27■■□□□ 1.16
TRIM43Q96BQ3 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC22.27■■□□□ 1.16
TRIM43Q96BQ3 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC22.27■■□□□ 1.16
TRIM43Q96BQ3 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
TRIM43Q96BQ3 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC22.27■■□□□ 1.16
TRIM43Q96BQ3 CCNG2-201ENST00000316355 5526 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
TRIM43Q96BQ3 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
TRIM43Q96BQ3 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
TRIM43Q96BQ3 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
TRIM43Q96BQ3 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
TRIM43Q96BQ3 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC22.26■■□□□ 1.15
TRIM43Q96BQ3 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC22.26■■□□□ 1.15
TRIM43Q96BQ3 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
TRIM43Q96BQ3 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC22.26■■□□□ 1.15
TRIM43Q96BQ3 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC22.26■■□□□ 1.15
TRIM43Q96BQ3 FITM1-202ENST00000559294 800 ntBASIC22.26■■□□□ 1.15
TRIM43Q96BQ3 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
TRIM43Q96BQ3 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
TRIM43Q96BQ3 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
TRIM43Q96BQ3 TMEM64-201ENST00000418210 4663 ntTSL 2 BASIC22.26■■□□□ 1.15
TRIM43Q96BQ3 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC22.26■■□□□ 1.15
TRIM43Q96BQ3 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC22.26■■□□□ 1.15
TRIM43Q96BQ3 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC22.25■■□□□ 1.15
TRIM43Q96BQ3 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC22.25■■□□□ 1.15
TRIM43Q96BQ3 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
TRIM43Q96BQ3 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
TRIM43Q96BQ3 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
TRIM43Q96BQ3 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC22.25■■□□□ 1.15
TRIM43Q96BQ3 TMA16-209ENST00000513272 803 ntTSL 2 BASIC22.25■■□□□ 1.15
TRIM43Q96BQ3 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC22.25■■□□□ 1.15
TRIM43Q96BQ3 AC087388.1-201ENST00000571370 1112 ntBASIC22.25■■□□□ 1.15
Retrieved 100 of 98,524 protein–RNA pairs in 8.4 ms