Protein–RNA interactions for Protein: P0C7V0

LINC00271, Putative uncharacterized protein encoded by LINC00271, humanhuman

Predictions only

Length 271 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00271P0C7V0 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
LINC00271P0C7V0 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
LINC00271P0C7V0 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC21.73■■□□□ 1.07
LINC00271P0C7V0 HTR7P1-201ENST00000538670 1336 ntBASIC21.73■■□□□ 1.07
LINC00271P0C7V0 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
LINC00271P0C7V0 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
LINC00271P0C7V0 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
LINC00271P0C7V0 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC21.72■■□□□ 1.07
LINC00271P0C7V0 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC21.72■■□□□ 1.07
LINC00271P0C7V0 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC21.72■■□□□ 1.07
LINC00271P0C7V0 GOLGA2P6-201ENST00000340929 2049 ntBASIC21.72■■□□□ 1.07
LINC00271P0C7V0 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
LINC00271P0C7V0 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
LINC00271P0C7V0 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
LINC00271P0C7V0 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC21.72■■□□□ 1.07
LINC00271P0C7V0 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC21.72■■□□□ 1.07
LINC00271P0C7V0 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
LINC00271P0C7V0 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC21.72■■□□□ 1.07
LINC00271P0C7V0 AC124283.5-201ENST00000624661 1809 ntBASIC21.71■■□□□ 1.07
LINC00271P0C7V0 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC21.71■■□□□ 1.07
LINC00271P0C7V0 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
LINC00271P0C7V0 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
LINC00271P0C7V0 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
LINC00271P0C7V0 MMP23A-201ENST00000234610 1017 ntBASIC21.71■■□□□ 1.07
LINC00271P0C7V0 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC21.71■■□□□ 1.07
LINC00271P0C7V0 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC21.71■■□□□ 1.07
LINC00271P0C7V0 KRT16P5-201ENST00000455284 522 ntBASIC21.71■■□□□ 1.07
LINC00271P0C7V0 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC21.71■■□□□ 1.07
LINC00271P0C7V0 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC21.71■■□□□ 1.07
LINC00271P0C7V0 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
LINC00271P0C7V0 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC21.71■■□□□ 1.07
LINC00271P0C7V0 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
LINC00271P0C7V0 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
LINC00271P0C7V0 TERT-206ENST00000508104 2486 ntTSL 5 BASIC21.7■■□□□ 1.06
LINC00271P0C7V0 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
LINC00271P0C7V0 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC21.7■■□□□ 1.06
LINC00271P0C7V0 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC21.7■■□□□ 1.06
LINC00271P0C7V0 KRT18P35-201ENST00000510488 1269 ntBASIC21.7■■□□□ 1.06
LINC00271P0C7V0 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC21.7■■□□□ 1.06
LINC00271P0C7V0 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC21.7■■□□□ 1.06
LINC00271P0C7V0 RPS15-203ENST00000586096 570 ntTSL 2 BASIC21.7■■□□□ 1.06
LINC00271P0C7V0 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC21.7■■□□□ 1.06
LINC00271P0C7V0 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
LINC00271P0C7V0 SRI-203ENST00000419179 1307 ntTSL 2 BASIC21.7■■□□□ 1.06
LINC00271P0C7V0 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC21.7■■□□□ 1.06
LINC00271P0C7V0 BTBD7-201ENST00000298896 2621 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
LINC00271P0C7V0 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC21.69■■□□□ 1.06
LINC00271P0C7V0 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
LINC00271P0C7V0 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC21.69■■□□□ 1.06
LINC00271P0C7V0 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
LINC00271P0C7V0 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
LINC00271P0C7V0 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC21.69■■□□□ 1.06
LINC00271P0C7V0 STK25-205ENST00000405883 1904 ntTSL 2 BASIC21.69■■□□□ 1.06
LINC00271P0C7V0 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
LINC00271P0C7V0 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
LINC00271P0C7V0 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC21.69■■□□□ 1.06
LINC00271P0C7V0 ZNF337-AS1-204ENST00000428254 817 ntTSL 5 BASIC21.69■■□□□ 1.06
LINC00271P0C7V0 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
LINC00271P0C7V0 FDX2-207ENST00000494368 584 ntTSL 4 BASIC21.69■■□□□ 1.06
LINC00271P0C7V0 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC21.69■■□□□ 1.06
LINC00271P0C7V0 F2R-202ENST00000505600 442 ntTSL 2 BASIC21.69■■□□□ 1.06
LINC00271P0C7V0 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC21.69■■□□□ 1.06
LINC00271P0C7V0 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC21.69■■□□□ 1.06
LINC00271P0C7V0 KRT8P9-201ENST00000558927 1449 ntBASIC21.69■■□□□ 1.06
LINC00271P0C7V0 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
LINC00271P0C7V0 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC21.69■■□□□ 1.06
LINC00271P0C7V0 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC21.69■■□□□ 1.06
LINC00271P0C7V0 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC21.68■■□□□ 1.06
LINC00271P0C7V0 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC21.68■■□□□ 1.06
LINC00271P0C7V0 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC21.68■■□□□ 1.06
LINC00271P0C7V0 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
LINC00271P0C7V0 FAM197Y1-201ENST00000421178 764 ntBASIC21.68■■□□□ 1.06
LINC00271P0C7V0 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
LINC00271P0C7V0 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
LINC00271P0C7V0 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC21.68■■□□□ 1.06
LINC00271P0C7V0 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC21.68■■□□□ 1.06
LINC00271P0C7V0 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
LINC00271P0C7V0 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
LINC00271P0C7V0 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
LINC00271P0C7V0 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
LINC00271P0C7V0 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
LINC00271P0C7V0 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
LINC00271P0C7V0 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC21.67■■□□□ 1.06
LINC00271P0C7V0 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC21.67■■□□□ 1.06
LINC00271P0C7V0 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
LINC00271P0C7V0 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
LINC00271P0C7V0 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC21.67■■□□□ 1.06
LINC00271P0C7V0 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC21.67■■□□□ 1.06
LINC00271P0C7V0 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
LINC00271P0C7V0 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
LINC00271P0C7V0 AL355355.2-201ENST00000442321 338 ntBASIC21.67■■□□□ 1.06
LINC00271P0C7V0 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC21.67■■□□□ 1.06
LINC00271P0C7V0 AC023632.3-201ENST00000521633 145 ntBASIC21.67■■□□□ 1.06
LINC00271P0C7V0 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC21.67■■□□□ 1.06
LINC00271P0C7V0 AC145285.6-201ENST00000604632 637 ntBASIC21.67■■□□□ 1.06
LINC00271P0C7V0 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC21.67■■□□□ 1.06
LINC00271P0C7V0 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC21.67■■□□□ 1.06
LINC00271P0C7V0 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC21.67■■□□□ 1.06
LINC00271P0C7V0 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
LINC00271P0C7V0 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC21.67■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 38.5 ms