Protein–RNA interactions for Protein: A0A0A0MS06

TRBV23-1, T-cell receptor beta variable 23-1 (non-functional) (Fragment), humanhuman

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV23-1A0A0A0MS06 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
TRBV23-1A0A0A0MS06 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC17.19■□□□□ 0.34
TRBV23-1A0A0A0MS06 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC17.19■□□□□ 0.34
TRBV23-1A0A0A0MS06 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC17.19■□□□□ 0.34
TRBV23-1A0A0A0MS06 AC007322.4-201ENST00000509611 723 ntBASIC17.19■□□□□ 0.34
TRBV23-1A0A0A0MS06 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC17.19■□□□□ 0.34
TRBV23-1A0A0A0MS06 AC231657.2-201ENST00000624556 255 ntBASIC17.19■□□□□ 0.34
TRBV23-1A0A0A0MS06 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
TRBV23-1A0A0A0MS06 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
TRBV23-1A0A0A0MS06 AC087289.5-201ENST00000586076 3175 ntBASIC17.19■□□□□ 0.34
TRBV23-1A0A0A0MS06 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
TRBV23-1A0A0A0MS06 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC17.19■□□□□ 0.34
TRBV23-1A0A0A0MS06 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
TRBV23-1A0A0A0MS06 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
TRBV23-1A0A0A0MS06 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC17.18■□□□□ 0.34
TRBV23-1A0A0A0MS06 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
TRBV23-1A0A0A0MS06 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
TRBV23-1A0A0A0MS06 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC17.18■□□□□ 0.34
TRBV23-1A0A0A0MS06 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
TRBV23-1A0A0A0MS06 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
TRBV23-1A0A0A0MS06 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
TRBV23-1A0A0A0MS06 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
TRBV23-1A0A0A0MS06 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
TRBV23-1A0A0A0MS06 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC17.18■□□□□ 0.34
TRBV23-1A0A0A0MS06 AC004911.1-201ENST00000416316 871 ntBASIC17.18■□□□□ 0.34
TRBV23-1A0A0A0MS06 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC17.18■□□□□ 0.34
TRBV23-1A0A0A0MS06 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC17.18■□□□□ 0.34
TRBV23-1A0A0A0MS06 RARRES2P11-201ENST00000635158 484 ntBASIC17.18■□□□□ 0.34
TRBV23-1A0A0A0MS06 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
TRBV23-1A0A0A0MS06 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC17.18■□□□□ 0.34
TRBV23-1A0A0A0MS06 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC17.18■□□□□ 0.34
TRBV23-1A0A0A0MS06 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
TRBV23-1A0A0A0MS06 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
TRBV23-1A0A0A0MS06 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
TRBV23-1A0A0A0MS06 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
TRBV23-1A0A0A0MS06 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
TRBV23-1A0A0A0MS06 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
TRBV23-1A0A0A0MS06 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
TRBV23-1A0A0A0MS06 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC17.18■□□□□ 0.34
TRBV23-1A0A0A0MS06 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
TRBV23-1A0A0A0MS06 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
TRBV23-1A0A0A0MS06 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
TRBV23-1A0A0A0MS06 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC17.17■□□□□ 0.34
TRBV23-1A0A0A0MS06 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC17.17■□□□□ 0.34
TRBV23-1A0A0A0MS06 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC17.17■□□□□ 0.34
TRBV23-1A0A0A0MS06 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
TRBV23-1A0A0A0MS06 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
TRBV23-1A0A0A0MS06 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC17.17■□□□□ 0.34
TRBV23-1A0A0A0MS06 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
TRBV23-1A0A0A0MS06 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
TRBV23-1A0A0A0MS06 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
TRBV23-1A0A0A0MS06 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC17.17■□□□□ 0.34
TRBV23-1A0A0A0MS06 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC17.17■□□□□ 0.34
TRBV23-1A0A0A0MS06 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
TRBV23-1A0A0A0MS06 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC17.17■□□□□ 0.34
TRBV23-1A0A0A0MS06 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
TRBV23-1A0A0A0MS06 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC17.17■□□□□ 0.34
TRBV23-1A0A0A0MS06 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC17.17■□□□□ 0.34
TRBV23-1A0A0A0MS06 VPS53-216ENST00000574029 585 ntTSL 4 BASIC17.17■□□□□ 0.34
TRBV23-1A0A0A0MS06 AC080038.1-201ENST00000611274 1154 ntBASIC17.17■□□□□ 0.34
TRBV23-1A0A0A0MS06 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
TRBV23-1A0A0A0MS06 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
TRBV23-1A0A0A0MS06 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
TRBV23-1A0A0A0MS06 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
TRBV23-1A0A0A0MS06 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC17.17■□□□□ 0.34
TRBV23-1A0A0A0MS06 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
TRBV23-1A0A0A0MS06 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC17.17■□□□□ 0.34
TRBV23-1A0A0A0MS06 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC17.16■□□□□ 0.34
TRBV23-1A0A0A0MS06 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
TRBV23-1A0A0A0MS06 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
TRBV23-1A0A0A0MS06 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
TRBV23-1A0A0A0MS06 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC17.16■□□□□ 0.34
TRBV23-1A0A0A0MS06 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
TRBV23-1A0A0A0MS06 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC17.16■□□□□ 0.34
TRBV23-1A0A0A0MS06 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
TRBV23-1A0A0A0MS06 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
TRBV23-1A0A0A0MS06 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC17.16■□□□□ 0.34
TRBV23-1A0A0A0MS06 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC17.16■□□□□ 0.34
TRBV23-1A0A0A0MS06 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
TRBV23-1A0A0A0MS06 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
TRBV23-1A0A0A0MS06 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
TRBV23-1A0A0A0MS06 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC17.16■□□□□ 0.34
TRBV23-1A0A0A0MS06 DUX4L16-201ENST00000555130 1264 ntBASIC17.16■□□□□ 0.34
TRBV23-1A0A0A0MS06 AL162412.1-201ENST00000567129 965 ntBASIC17.16■□□□□ 0.34
TRBV23-1A0A0A0MS06 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC17.16■□□□□ 0.34
TRBV23-1A0A0A0MS06 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC17.16■□□□□ 0.34
TRBV23-1A0A0A0MS06 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
TRBV23-1A0A0A0MS06 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
TRBV23-1A0A0A0MS06 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
TRBV23-1A0A0A0MS06 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
TRBV23-1A0A0A0MS06 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
TRBV23-1A0A0A0MS06 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC17.16■□□□□ 0.34
TRBV23-1A0A0A0MS06 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
TRBV23-1A0A0A0MS06 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
TRBV23-1A0A0A0MS06 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
TRBV23-1A0A0A0MS06 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
TRBV23-1A0A0A0MS06 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
TRBV23-1A0A0A0MS06 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC17.15■□□□□ 0.34
TRBV23-1A0A0A0MS06 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC17.15■□□□□ 0.34
TRBV23-1A0A0A0MS06 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 31.6 ms