Protein–RNA interactions for Protein: Q05787

HRD3, ERAD-associated E3 ubiquitin-protein ligase component HRD3, yeastyeast

Predictions only

Length 833 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
HRD3Q05787 ABZ2YMR289W 1125 nt9□□□□□ -0.97
HRD3Q05787 SLG1YOR008C 1137 nt9□□□□□ -0.97
HRD3Q05787 SPT20YOL148C 1815 nt8.99□□□□□ -0.97
HRD3Q05787 IGD1YFR017C 588 nt8.99□□□□□ -0.97
HRD3Q05787 OPI3YJR073C 621 nt8.99□□□□□ -0.97
HRD3Q05787 CDD1YLR245C 429 nt8.99□□□□□ -0.97
HRD3Q05787 HSL7YBR133C 2484 nt8.98□□□□□ -0.97
HRD3Q05787 NAS2YIL007C 663 nt8.98□□□□□ -0.97
HRD3Q05787 TIP1YBR067C 633 nt8.98□□□□□ -0.97
HRD3Q05787 SAC7YDR389W 1965 nt8.98□□□□□ -0.97
HRD3Q05787 BET2YPR176C 978 nt8.97□□□□□ -0.97
HRD3Q05787 LSB6YJL100W 1824 nt8.96□□□□□ -0.97
HRD3Q05787 TIM44YIL022W 1296 nt8.94□□□□□ -0.98
HRD3Q05787 ENT4YLL038C 744 nt8.94□□□□□ -0.98
HRD3Q05787 KRE1YNL322C 942 nt8.94□□□□□ -0.98
HRD3Q05787 DIG1YPL049C 1359 nt8.92□□□□□ -0.98
HRD3Q05787 YLR046CYLR046C 813 nt8.91□□□□□ -0.98
HRD3Q05787 MUP1YGR055W 1725 nt8.91□□□□□ -0.98
HRD3Q05787 tA(AGC)DtA(AGC)D 73 nt8.9□□□□□ -0.98
HRD3Q05787 tA(AGC)FtA(AGC)F 73 nt8.9□□□□□ -0.98
HRD3Q05787 tA(AGC)GtA(AGC)G 73 nt8.9□□□□□ -0.98
HRD3Q05787 tA(AGC)HtA(AGC)H 73 nt8.9□□□□□ -0.98
HRD3Q05787 tA(AGC)JtA(AGC)J 73 nt8.9□□□□□ -0.98
HRD3Q05787 tA(AGC)K1tA(AGC)K1 73 nt8.9□□□□□ -0.98
HRD3Q05787 tA(AGC)K2tA(AGC)K2 73 nt8.9□□□□□ -0.98
HRD3Q05787 tA(AGC)LtA(AGC)L 73 nt8.9□□□□□ -0.98
HRD3Q05787 tA(AGC)M1tA(AGC)M1 73 nt8.9□□□□□ -0.98
HRD3Q05787 tA(AGC)M2tA(AGC)M2 73 nt8.9□□□□□ -0.98
HRD3Q05787 tA(AGC)PtA(AGC)P 73 nt8.9□□□□□ -0.98
HRD3Q05787 YNR064CYNR064C 873 nt8.9□□□□□ -0.98
HRD3Q05787 SPE2YOL052C 1191 nt8.9□□□□□ -0.98
HRD3Q05787 THP3YPR045C 1413 nt8.89□□□□□ -0.99
HRD3Q05787 ENO2YHR174W 1314 nt8.89□□□□□ -0.99
HRD3Q05787 QDR2YIL121W 1629 nt8.89□□□□□ -0.99
HRD3Q05787 IPL1YPL209C 1104 nt8.88□□□□□ -0.99
HRD3Q05787 ARO8YGL202W 1503 nt8.87□□□□□ -0.99
HRD3Q05787 AMF1YOR378W 1548 nt8.87□□□□□ -0.99
HRD3Q05787 TPC1YGR096W 945 nt8.87□□□□□ -0.99
HRD3Q05787 PCP1YGR101W 1041 nt8.85□□□□□ -0.99
HRD3Q05787 ELO1YJL196C 933 nt8.85□□□□□ -0.99
HRD3Q05787 YCR025CYCR025C 411 nt8.84□□□□□ -0.99
HRD3Q05787 ITR2YOL103W 1830 nt8.84□□□□□ -0.99
HRD3Q05787 PHB2YGR231C 933 nt8.83□□□□□ -1
HRD3Q05787 FLX1YIL134W 936 nt8.83□□□□□ -1
HRD3Q05787 ADH3YMR083W 1128 nt8.83□□□□□ -1
HRD3Q05787 FSH2YMR222C 672 nt8.83□□□□□ -1
HRD3Q05787 DLD3YEL071W 1491 nt8.83□□□□□ -1
HRD3Q05787 KES1YPL145C 1305 nt8.81□□□□□ -1
HRD3Q05787 HOL1YNR055C 1761 nt8.81□□□□□ -1
HRD3Q05787 COQ8YGL119W 1506 nt8.81□□□□□ -1
HRD3Q05787 ACO2YJL200C 2370 nt8.8□□□□□ -1
HRD3Q05787 KEL3YPL263C 1956 nt8.79□□□□□ -1
HRD3Q05787 SAM50YNL026W 1455 nt8.79□□□□□ -1
HRD3Q05787 SFL1YOR140W 2301 nt8.79□□□□□ -1
HRD3Q05787 GID8YMR135C 1368 nt8.79□□□□□ -1
HRD3Q05787 YCP4YCR004C 744 nt8.79□□□□□ -1
HRD3Q05787 SWT21YNL187W 1074 nt8.79□□□□□ -1
HRD3Q05787 LEU2YCL018W 1095 nt8.79□□□□□ -1
HRD3Q05787 NAM8YHR086W 1572 nt8.78□□□□□ -1
HRD3Q05787 YHR219WYHR219W 1875 nt8.77□□□□□ -1.01
HRD3Q05787 MOB1YIL106W 945 nt8.76□□□□□ -1.01
HRD3Q05787 YKR012CYKR012C 378 nt8.76□□□□□ -1.01
HRD3Q05787 RIB1YBL033C 1038 nt8.76□□□□□ -1.01
HRD3Q05787 SUV3YPL029W 2214 nt8.76□□□□□ -1.01
HRD3Q05787 SGA1YIL099W 1650 nt8.75□□□□□ -1.01
HRD3Q05787 LYS20YDL182W 1287 nt8.75□□□□□ -1.01
HRD3Q05787 LSR1LSR1 1175 nt8.75□□□□□ -1.01
HRD3Q05787 MRS6YOR370C 1812 nt8.75□□□□□ -1.01
HRD3Q05787 MET1YKR069W 1782 nt8.74□□□□□ -1.01
HRD3Q05787 YIA6YIL006W 1122 nt8.74□□□□□ -1.01
HRD3Q05787 FRE6YLL051C 2139 nt8.74□□□□□ -1.01
HRD3Q05787 SWM1YDR260C 513 nt8.73□□□□□ -1.01
HRD3Q05787 YKL133CYKL133C 1392 nt8.73□□□□□ -1.01
HRD3Q05787 YMR265CYMR265C 1386 nt8.73□□□□□ -1.01
HRD3Q05787 HAP5YOR358W 729 nt8.72□□□□□ -1.01
HRD3Q05787 VMA11YPL234C 495 nt8.72□□□□□ -1.01
HRD3Q05787 ZAP1YJL056C 2643 nt8.71□□□□□ -1.01
HRD3Q05787 SDS24YBR214W 1584 nt8.71□□□□□ -1.02
HRD3Q05787 SOD2YHR008C 702 nt8.71□□□□□ -1.02
HRD3Q05787 CYC3YAL039C 810 nt8.71□□□□□ -1.02
HRD3Q05787 YKL053WYKL053W 375 nt8.71□□□□□ -1.02
HRD3Q05787 ERG6YML008C 1152 nt8.71□□□□□ -1.02
HRD3Q05787 SER2YGR208W 930 nt8.7□□□□□ -1.02
HRD3Q05787 REX2YLR059C 810 nt8.69□□□□□ -1.02
HRD3Q05787 CRC1YOR100C 984 nt8.69□□□□□ -1.02
HRD3Q05787 snR31snR31 225 nt8.69□□□□□ -1.02
HRD3Q05787 VBA3YCL069W 1377 nt8.67□□□□□ -1.02
HRD3Q05787 HEL2YDR266C 1920 nt8.66□□□□□ -1.02
HRD3Q05787 RPN14YGL004C 1254 nt8.66□□□□□ -1.02
HRD3Q05787 SNX3YOR357C 489 nt8.66□□□□□ -1.02
HRD3Q05787 UGP1YKL035W 1500 nt8.65□□□□□ -1.02
HRD3Q05787 ENO1YGR254W 1314 nt8.65□□□□□ -1.02
HRD3Q05787 HTS1YPR033C 1641 nt8.65□□□□□ -1.03
HRD3Q05787 SRP54YPR088C 1626 nt8.65□□□□□ -1.03
HRD3Q05787 RPD3YNL330C 1302 nt8.64□□□□□ -1.03
HRD3Q05787 SRP102YKL154W 735 nt8.64□□□□□ -1.03
HRD3Q05787 TGA1tA(UGC)A 73 nt8.63□□□□□ -1.03
HRD3Q05787 tA(UGC)EtA(UGC)E 73 nt8.63□□□□□ -1.03
HRD3Q05787 tA(UGC)GtA(UGC)G 73 nt8.63□□□□□ -1.03
HRD3Q05787 tA(UGC)LtA(UGC)L 73 nt8.63□□□□□ -1.03
Retrieved 100 of 7,029 protein–RNA pairs in 16.2 ms