Protein–RNA interactions for Protein: P49957

TRM9, tRNA (carboxymethyluridine(34)-5-O)-methyltransferase, yeastyeast

Predictions only

Length 279 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
TRM9P49957 TAT2YOL020W 1779 nt8.17□□□□□ -1.1
TRM9P49957 LSM5YER146W 282 nt8.16□□□□□ -1.1
TRM9P49957 YFR036W-AYFR036W-A 651 nt8.16□□□□□ -1.1
TRM9P49957 VPS62YGR141W 1404 nt8.14□□□□□ -1.11
TRM9P49957 TVP23YDR084C 600 nt8.14□□□□□ -1.11
TRM9P49957 YDR455CYDR455C 309 nt8.14□□□□□ -1.11
TRM9P49957 ASP3-1YLR155C 1089 nt8.13□□□□□ -1.11
TRM9P49957 ASP3-2YLR157C 1089 nt8.13□□□□□ -1.11
TRM9P49957 ASP3-3YLR158C 1089 nt8.13□□□□□ -1.11
TRM9P49957 ASP3-4YLR160C 1089 nt8.13□□□□□ -1.11
TRM9P49957 YDL086WYDL086W 822 nt8.11□□□□□ -1.11
TRM9P49957 ADE8YDR408C 645 nt8.11□□□□□ -1.11
TRM9P49957 IPL1YPL209C 1104 nt8.11□□□□□ -1.11
TRM9P49957 URA8YJR103W 1737 nt8.1□□□□□ -1.11
TRM9P49957 tA(AGC)DtA(AGC)D 73 nt8.1□□□□□ -1.11
TRM9P49957 tA(AGC)FtA(AGC)F 73 nt8.1□□□□□ -1.11
TRM9P49957 tA(AGC)GtA(AGC)G 73 nt8.1□□□□□ -1.11
TRM9P49957 tA(AGC)HtA(AGC)H 73 nt8.1□□□□□ -1.11
TRM9P49957 tA(AGC)JtA(AGC)J 73 nt8.1□□□□□ -1.11
TRM9P49957 tA(AGC)K1tA(AGC)K1 73 nt8.1□□□□□ -1.11
TRM9P49957 tA(AGC)K2tA(AGC)K2 73 nt8.1□□□□□ -1.11
TRM9P49957 tA(AGC)LtA(AGC)L 73 nt8.1□□□□□ -1.11
TRM9P49957 tA(AGC)M1tA(AGC)M1 73 nt8.1□□□□□ -1.11
TRM9P49957 tA(AGC)M2tA(AGC)M2 73 nt8.1□□□□□ -1.11
TRM9P49957 tA(AGC)PtA(AGC)P 73 nt8.1□□□□□ -1.11
TRM9P49957 NAS2YIL007C 663 nt8.1□□□□□ -1.11
TRM9P49957 ERG13YML126C 1476 nt8.1□□□□□ -1.11
TRM9P49957 THP3YPR045C 1413 nt8.1□□□□□ -1.11
TRM9P49957 ERG6YML008C 1152 nt8.09□□□□□ -1.11
TRM9P49957 ABZ2YMR289W 1125 nt8.09□□□□□ -1.11
TRM9P49957 FSH2YMR222C 672 nt8.08□□□□□ -1.12
TRM9P49957 INA1YLR413W 2028 nt8.08□□□□□ -1.12
TRM9P49957 RPC82YPR190C 1965 nt8.08□□□□□ -1.12
TRM9P49957 SWM1YDR260C 513 nt8.07□□□□□ -1.12
TRM9P49957 SOD2YHR008C 702 nt8.07□□□□□ -1.12
TRM9P49957 BSP1YPR171W 1731 nt8.06□□□□□ -1.12
TRM9P49957 SAM50YNL026W 1455 nt8.06□□□□□ -1.12
TRM9P49957 YCR025CYCR025C 411 nt8.05□□□□□ -1.12
TRM9P49957 ILV2YMR108W 2064 nt8.05□□□□□ -1.12
TRM9P49957 MUP1YGR055W 1725 nt8.04□□□□□ -1.12
TRM9P49957 FLX1YIL134W 936 nt8.04□□□□□ -1.12
TRM9P49957 OPI3YJR073C 621 nt8.04□□□□□ -1.12
TRM9P49957 ESBP6YNL125C 2022 nt8.03□□□□□ -1.12
TRM9P49957 YIL100C-AYIL100C-A 339 nt8.03□□□□□ -1.12
TRM9P49957 KRE1YNL322C 942 nt8.03□□□□□ -1.12
TRM9P49957 POP2YNR052C 1302 nt8.03□□□□□ -1.12
TRM9P49957 ENT4YLL038C 744 nt8.02□□□□□ -1.13
TRM9P49957 SAC7YDR389W 1965 nt8.02□□□□□ -1.13
TRM9P49957 GTB1YDR221W 2109 nt7.99□□□□□ -1.13
TRM9P49957 PHB2YGR231C 933 nt7.99□□□□□ -1.13
TRM9P49957 OPI10YOL032W 741 nt7.99□□□□□ -1.13
TRM9P49957 ILV3YJR016C 1758 nt7.98□□□□□ -1.13
TRM9P49957 YER152W-AYER152W-A 567 nt7.98□□□□□ -1.13
TRM9P49957 AIM1YAL046C 357 nt7.98□□□□□ -1.13
TRM9P49957 AMF1YOR378W 1548 nt7.98□□□□□ -1.13
TRM9P49957 LYS20YDL182W 1287 nt7.97□□□□□ -1.13
TRM9P49957 CCT2YIL142W 1584 nt7.97□□□□□ -1.13
TRM9P49957 PCP1YGR101W 1041 nt7.96□□□□□ -1.14
TRM9P49957 ADH3YMR083W 1128 nt7.96□□□□□ -1.14
TRM9P49957 SPE2YOL052C 1191 nt7.96□□□□□ -1.14
TRM9P49957 LSB6YJL100W 1824 nt7.95□□□□□ -1.14
TRM9P49957 YMR007WYMR007W 381 nt7.95□□□□□ -1.14
TRM9P49957 YNR064CYNR064C 873 nt7.95□□□□□ -1.14
TRM9P49957 QDR2YIL121W 1629 nt7.94□□□□□ -1.14
TRM9P49957 SER2YGR208W 930 nt7.94□□□□□ -1.14
TRM9P49957 CYC3YAL039C 810 nt7.94□□□□□ -1.14
TRM9P49957 BET2YPR176C 978 nt7.93□□□□□ -1.14
TRM9P49957 ENO2YHR174W 1314 nt7.93□□□□□ -1.14
TRM9P49957 DIG1YPL049C 1359 nt7.93□□□□□ -1.14
TRM9P49957 LEU2YCL018W 1095 nt7.92□□□□□ -1.14
TRM9P49957 GAL2YLR081W 1725 nt7.92□□□□□ -1.14
TRM9P49957 YHL008CYHL008C 1884 nt7.92□□□□□ -1.14
TRM9P49957 TPC1YGR096W 945 nt7.91□□□□□ -1.14
TRM9P49957 SRP102YKL154W 735 nt7.91□□□□□ -1.14
TRM9P49957 YOR325WYOR325W 474 nt7.91□□□□□ -1.14
TRM9P49957 HTS1YPR033C 1641 nt7.91□□□□□ -1.14
TRM9P49957 DTR1YBR180W 1719 nt7.9□□□□□ -1.14
TRM9P49957 RCR1YBR005W 642 nt7.9□□□□□ -1.14
TRM9P49957 HXK1YFR053C 1458 nt7.89□□□□□ -1.15
TRM9P49957 MOB1YIL106W 945 nt7.89□□□□□ -1.15
TRM9P49957 SDS24YBR214W 1584 nt7.88□□□□□ -1.15
TRM9P49957 YLR046CYLR046C 813 nt7.88□□□□□ -1.15
TRM9P49957 SWT21YNL187W 1074 nt7.88□□□□□ -1.15
TRM9P49957 KEL3YPL263C 1956 nt7.88□□□□□ -1.15
TRM9P49957 HOL1YNR055C 1761 nt7.87□□□□□ -1.15
TRM9P49957 NAM8YHR086W 1572 nt7.85□□□□□ -1.15
TRM9P49957 YKR012CYKR012C 378 nt7.85□□□□□ -1.15
TRM9P49957 BUD20YLR074C 501 nt7.85□□□□□ -1.15
TRM9P49957 SFL1YOR140W 2301 nt7.85□□□□□ -1.15
TRM9P49957 ENO1YGR254W 1314 nt7.83□□□□□ -1.16
TRM9P49957 ALD5YER073W 1563 nt7.83□□□□□ -1.16
TRM9P49957 VBA3YCL069W 1377 nt7.83□□□□□ -1.16
TRM9P49957 DLD3YEL071W 1491 nt7.82□□□□□ -1.16
TRM9P49957 YMR209CYMR209C 1374 nt7.82□□□□□ -1.16
TRM9P49957 SUV3YPL029W 2214 nt7.81□□□□□ -1.16
TRM9P49957 YGR210CYGR210C 1236 nt7.81□□□□□ -1.16
TRM9P49957 ELO1YJL196C 933 nt7.81□□□□□ -1.16
TRM9P49957 REX2YLR059C 810 nt7.81□□□□□ -1.16
TRM9P49957 snR31snR31 225 nt7.81□□□□□ -1.16
TRM9P49957 ERO1YML130C 1692 nt7.81□□□□□ -1.16
Retrieved 100 of 7,029 protein–RNA pairs in 25.2 ms