Protein–RNA interactions for Protein: P0C1V4

Tmco2, Transmembrane and coiled-coil domain-containing protein 2, mousemouse

Predictions only

Length 183 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tmco2P0C1V4 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC23.77■■□□□ 1.4
Tmco2P0C1V4 Apcdd1-202ENSMUST00000163716 1888 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
Tmco2P0C1V4 Phf10-201ENSMUST00000024657 1663 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
Tmco2P0C1V4 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC23.76■■□□□ 1.39
Tmco2P0C1V4 Fam69b-201ENSMUST00000074240 1622 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
Tmco2P0C1V4 Hoxa13-203ENSMUST00000147595 2395 ntAPPRIS P5 TSL 5 BASIC23.75■■□□□ 1.39
Tmco2P0C1V4 Popdc3-201ENSMUST00000019994 1853 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
Tmco2P0C1V4 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
Tmco2P0C1V4 Ring1-201ENSMUST00000025183 2034 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
Tmco2P0C1V4 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
Tmco2P0C1V4 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
Tmco2P0C1V4 Gm11599-201ENSMUST00000118720 878 ntBASIC23.72■■□□□ 1.39
Tmco2P0C1V4 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC23.72■■□□□ 1.39
Tmco2P0C1V4 Slc16a6-203ENSMUST00000070872 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC23.71■■□□□ 1.39
Tmco2P0C1V4 Rbms1-202ENSMUST00000112509 1806 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
Tmco2P0C1V4 Fcnaos-201ENSMUST00000127642 1351 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
Tmco2P0C1V4 Msi2-202ENSMUST00000107908 695 ntTSL 5 BASIC23.7■■□□□ 1.38
Tmco2P0C1V4 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC23.7■■□□□ 1.38
Tmco2P0C1V4 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
Tmco2P0C1V4 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC23.7■■□□□ 1.38
Tmco2P0C1V4 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC23.69■■□□□ 1.38
Tmco2P0C1V4 Ell2-205ENSMUST00000222194 434 ntTSL 3 BASIC23.68■■□□□ 1.38
Tmco2P0C1V4 Pdia5-201ENSMUST00000023550 1808 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
Tmco2P0C1V4 Noxo1-201ENSMUST00000019464 2238 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
Tmco2P0C1V4 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC23.67■■□□□ 1.38
Tmco2P0C1V4 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
Tmco2P0C1V4 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
Tmco2P0C1V4 Yars2-201ENSMUST00000059955 1574 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
Tmco2P0C1V4 Gm45716-202ENSMUST00000134929 2031 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
Tmco2P0C1V4 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC23.66■■□□□ 1.38
Tmco2P0C1V4 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
Tmco2P0C1V4 Ywhah-201ENSMUST00000019109 1764 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
Tmco2P0C1V4 Smad7-202ENSMUST00000168918 1882 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
Tmco2P0C1V4 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
Tmco2P0C1V4 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC23.6■■□□□ 1.37
Tmco2P0C1V4 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC23.6■■□□□ 1.37
Tmco2P0C1V4 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC23.59■■□□□ 1.37
Tmco2P0C1V4 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
Tmco2P0C1V4 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
Tmco2P0C1V4 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC23.58■■□□□ 1.37
Tmco2P0C1V4 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC23.58■■□□□ 1.37
Tmco2P0C1V4 Gm11175-201ENSMUST00000116172 543 ntBASIC23.58■■□□□ 1.37
Tmco2P0C1V4 Mfsd5-201ENSMUST00000051341 1742 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
Tmco2P0C1V4 Susd4-202ENSMUST00000153348 1898 ntAPPRIS P1 TSL 5 BASIC23.58■■□□□ 1.36
Tmco2P0C1V4 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC23.57■■□□□ 1.36
Tmco2P0C1V4 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
Tmco2P0C1V4 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC23.57■■□□□ 1.36
Tmco2P0C1V4 Mxd4-202ENSMUST00000119171 1160 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
Tmco2P0C1V4 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC23.55■■□□□ 1.36
Tmco2P0C1V4 Iffo2-203ENSMUST00000174078 5716 ntAPPRIS ALT2 TSL 1 (best) BASIC23.54■■□□□ 1.36
Tmco2P0C1V4 Tsen34-211ENSMUST00000205287 1375 ntTSL 5 BASIC23.54■■□□□ 1.36
Tmco2P0C1V4 Mcat-201ENSMUST00000061882 1893 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
Tmco2P0C1V4 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC23.54■■□□□ 1.36
Tmco2P0C1V4 Runx3-202ENSMUST00000119564 1855 ntAPPRIS ALT2 TSL 1 (best) BASIC23.53■■□□□ 1.36
Tmco2P0C1V4 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
Tmco2P0C1V4 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
Tmco2P0C1V4 Cadm1-210ENSMUST00000214542 899 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
Tmco2P0C1V4 Ebag9-203ENSMUST00000227691 1945 ntAPPRIS P1 BASIC23.52■■□□□ 1.36
Tmco2P0C1V4 Dmwd-201ENSMUST00000032570 2494 ntAPPRIS P2 TSL 1 (best) BASIC23.52■■□□□ 1.36
Tmco2P0C1V4 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
Tmco2P0C1V4 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC23.51■■□□□ 1.35
Tmco2P0C1V4 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC23.5■■□□□ 1.35
Tmco2P0C1V4 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC23.5■■□□□ 1.35
Tmco2P0C1V4 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC23.5■■□□□ 1.35
Tmco2P0C1V4 Syndig1l-204ENSMUST00000222422 1758 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
Tmco2P0C1V4 Tpst1-201ENSMUST00000040721 2050 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
Tmco2P0C1V4 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC23.48■■□□□ 1.35
Tmco2P0C1V4 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC23.48■■□□□ 1.35
Tmco2P0C1V4 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
Tmco2P0C1V4 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC23.48■■□□□ 1.35
Tmco2P0C1V4 Dcaf15-202ENSMUST00000210279 2199 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
Tmco2P0C1V4 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC23.47■■□□□ 1.35
Tmco2P0C1V4 Galnt10-202ENSMUST00000108846 1745 ntTSL 1 (best) BASIC23.47■■□□□ 1.35
Tmco2P0C1V4 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC23.46■■□□□ 1.35
Tmco2P0C1V4 Otulin-201ENSMUST00000059662 1491 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.34
Tmco2P0C1V4 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC23.45■■□□□ 1.34
Tmco2P0C1V4 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC23.45■■□□□ 1.34
Tmco2P0C1V4 Guf1-201ENSMUST00000031113 1769 ntTSL 1 (best) BASIC23.45■■□□□ 1.34
Tmco2P0C1V4 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC23.43■■□□□ 1.34
Tmco2P0C1V4 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC23.43■■□□□ 1.34
Tmco2P0C1V4 Dazap1-203ENSMUST00000105362 2081 ntAPPRIS P3 TSL 1 (best) BASIC23.43■■□□□ 1.34
Tmco2P0C1V4 Gm6345-201ENSMUST00000180378 1691 ntBASIC23.42■■□□□ 1.34
Tmco2P0C1V4 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC23.42■■□□□ 1.34
Tmco2P0C1V4 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC23.42■■□□□ 1.34
Tmco2P0C1V4 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC23.42■■□□□ 1.34
Tmco2P0C1V4 Ric1-206ENSMUST00000162184 2157 ntTSL 1 (best) BASIC23.42■■□□□ 1.34
Tmco2P0C1V4 Traf4-201ENSMUST00000017530 2078 ntAPPRIS P1 TSL 1 (best) BASIC23.42■■□□□ 1.34
Tmco2P0C1V4 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC23.41■■□□□ 1.34
Tmco2P0C1V4 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC23.41■■□□□ 1.34
Tmco2P0C1V4 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC23.41■■□□□ 1.34
Tmco2P0C1V4 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
Tmco2P0C1V4 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC23.4■■□□□ 1.34
Tmco2P0C1V4 Rab40c-201ENSMUST00000026826 2466 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
Tmco2P0C1V4 Pdss1-201ENSMUST00000053729 1642 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
Tmco2P0C1V4 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC23.39■■□□□ 1.34
Tmco2P0C1V4 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC23.39■■□□□ 1.33
Tmco2P0C1V4 Smad2-202ENSMUST00000091831 1645 ntAPPRIS ALT1 TSL 5 BASIC23.39■■□□□ 1.33
Tmco2P0C1V4 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC23.39■■□□□ 1.33
Tmco2P0C1V4 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC23.38■■□□□ 1.33
Tmco2P0C1V4 Mir6538-201ENSMUST00000183713 110 ntBASIC23.37■■□□□ 1.33
Retrieved 100 of 76,532 protein–RNA pairs in 16.4 ms