Protein–RNA interactions for Protein: P0C1V4

Tmco2, Transmembrane and coiled-coil domain-containing protein 2, mousemouse

Predictions only

Length 183 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tmco2P0C1V4 Gm25239-201ENSMUST00000174915 86 ntBASIC37.9■■■■□ 3.66
Tmco2P0C1V4 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC35.2■■■■□ 3.23
Tmco2P0C1V4 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC34.58■■■■□ 3.13
Tmco2P0C1V4 Gm24109-201ENSMUST00000175489 103 ntBASIC32.99■■■□□ 2.87
Tmco2P0C1V4 Gm15042-201ENSMUST00000120212 883 ntBASIC32.83■■■□□ 2.85
Tmco2P0C1V4 Gm15045-201ENSMUST00000117359 883 ntBASIC32.08■■■□□ 2.73
Tmco2P0C1V4 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC31.96■■■□□ 2.71
Tmco2P0C1V4 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC31.94■■■□□ 2.7
Tmco2P0C1V4 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC31.8■■■□□ 2.68
Tmco2P0C1V4 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC31.71■■■□□ 2.67
Tmco2P0C1V4 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC31.57■■■□□ 2.64
Tmco2P0C1V4 Gm23366-201ENSMUST00000175022 89 ntBASIC31.55■■■□□ 2.64
Tmco2P0C1V4 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC30.93■■■□□ 2.54
Tmco2P0C1V4 AC153911.1-202ENSMUST00000218534 1034 ntBASIC30.91■■■□□ 2.54
Tmco2P0C1V4 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC30.67■■■□□ 2.5
Tmco2P0C1V4 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC30.67■■■□□ 2.5
Tmco2P0C1V4 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC30.63■■■□□ 2.49
Tmco2P0C1V4 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC30.54■■■□□ 2.48
Tmco2P0C1V4 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC30.43■■■□□ 2.46
Tmco2P0C1V4 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC30.32■■■□□ 2.44
Tmco2P0C1V4 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC30.22■■■□□ 2.43
Tmco2P0C1V4 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC30.12■■■□□ 2.41
Tmco2P0C1V4 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC30.06■■■□□ 2.4
Tmco2P0C1V4 Gm25238-201ENSMUST00000174914 89 ntBASIC30.02■■■□□ 2.4
Tmco2P0C1V4 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC29.97■■■□□ 2.39
Tmco2P0C1V4 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC29.92■■■□□ 2.38
Tmco2P0C1V4 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC29.92■■■□□ 2.38
Tmco2P0C1V4 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC29.9■■■□□ 2.38
Tmco2P0C1V4 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC29.89■■■□□ 2.38
Tmco2P0C1V4 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC29.66■■■□□ 2.34
Tmco2P0C1V4 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC29.63■■■□□ 2.33
Tmco2P0C1V4 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC29.62■■■□□ 2.33
Tmco2P0C1V4 Psd-208ENSMUST00000224556 2034 ntBASIC29.45■■■□□ 2.31
Tmco2P0C1V4 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC29.25■■■□□ 2.27
Tmco2P0C1V4 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC29.25■■■□□ 2.27
Tmco2P0C1V4 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC29.22■■■□□ 2.27
Tmco2P0C1V4 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC29.1■■■□□ 2.25
Tmco2P0C1V4 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC29.07■■■□□ 2.24
Tmco2P0C1V4 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC29.04■■■□□ 2.24
Tmco2P0C1V4 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC28.97■■■□□ 2.23
Tmco2P0C1V4 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC28.92■■■□□ 2.22
Tmco2P0C1V4 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC28.92■■■□□ 2.22
Tmco2P0C1V4 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC28.84■■■□□ 2.21
Tmco2P0C1V4 Gm25262-201ENSMUST00000174934 133 ntBASIC28.81■■■□□ 2.2
Tmco2P0C1V4 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC28.7■■■□□ 2.18
Tmco2P0C1V4 Gm27325-201ENSMUST00000175467 74 ntBASIC28.7■■■□□ 2.18
Tmco2P0C1V4 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC28.62■■■□□ 2.17
Tmco2P0C1V4 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC28.61■■■□□ 2.17
Tmco2P0C1V4 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC28.52■■■□□ 2.16
Tmco2P0C1V4 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC28.5■■■□□ 2.15
Tmco2P0C1V4 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC28.45■■■□□ 2.14
Tmco2P0C1V4 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC28.37■■■□□ 2.13
Tmco2P0C1V4 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC28.35■■■□□ 2.13
Tmco2P0C1V4 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC28.34■■■□□ 2.13
Tmco2P0C1V4 Rab21-202ENSMUST00000218831 843 ntBASIC28.33■■■□□ 2.13
Tmco2P0C1V4 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC28.29■■■□□ 2.12
Tmco2P0C1V4 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC28.25■■■□□ 2.11
Tmco2P0C1V4 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC28.24■■■□□ 2.11
Tmco2P0C1V4 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC28.21■■■□□ 2.11
Tmco2P0C1V4 Gm26115-201ENSMUST00000175605 87 ntBASIC28.19■■■□□ 2.1
Tmco2P0C1V4 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC28.18■■■□□ 2.1
Tmco2P0C1V4 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC28.17■■■□□ 2.1
Tmco2P0C1V4 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC28.1■■■□□ 2.09
Tmco2P0C1V4 Gm8109-201ENSMUST00000194076 746 ntBASIC28.1■■■□□ 2.09
Tmco2P0C1V4 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC28.1■■■□□ 2.09
Tmco2P0C1V4 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC28.09■■■□□ 2.09
Tmco2P0C1V4 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC28.09■■■□□ 2.09
Tmco2P0C1V4 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC28.08■■■□□ 2.09
Tmco2P0C1V4 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC28.02■■■□□ 2.08
Tmco2P0C1V4 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC28.02■■■□□ 2.08
Tmco2P0C1V4 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC28.01■■■□□ 2.07
Tmco2P0C1V4 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC27.99■■■□□ 2.07
Tmco2P0C1V4 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC27.98■■■□□ 2.07
Tmco2P0C1V4 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC27.86■■■□□ 2.05
Tmco2P0C1V4 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC27.83■■■□□ 2.05
Tmco2P0C1V4 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC27.82■■■□□ 2.04
Tmco2P0C1V4 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC27.78■■■□□ 2.04
Tmco2P0C1V4 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC27.77■■■□□ 2.04
Tmco2P0C1V4 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC27.76■■■□□ 2.03
Tmco2P0C1V4 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC27.75■■■□□ 2.03
Tmco2P0C1V4 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC27.73■■■□□ 2.03
Tmco2P0C1V4 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC27.73■■■□□ 2.03
Tmco2P0C1V4 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC27.69■■■□□ 2.02
Tmco2P0C1V4 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC27.67■■■□□ 2.02
Tmco2P0C1V4 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC27.59■■■□□ 2.01
Tmco2P0C1V4 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC27.58■■■□□ 2.01
Tmco2P0C1V4 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC27.49■■□□□ 1.99
Tmco2P0C1V4 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC27.47■■□□□ 1.99
Tmco2P0C1V4 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC27.45■■□□□ 1.98
Tmco2P0C1V4 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC27.43■■□□□ 1.98
Tmco2P0C1V4 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC27.41■■□□□ 1.98
Tmco2P0C1V4 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC27.4■■□□□ 1.98
Tmco2P0C1V4 Gm17082-201ENSMUST00000166043 1091 ntBASIC27.38■■□□□ 1.97
Tmco2P0C1V4 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC27.36■■□□□ 1.97
Tmco2P0C1V4 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC27.34■■□□□ 1.97
Tmco2P0C1V4 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC27.34■■□□□ 1.97
Tmco2P0C1V4 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC27.32■■□□□ 1.96
Tmco2P0C1V4 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC27.31■■□□□ 1.96
Tmco2P0C1V4 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC27.31■■□□□ 1.96
Tmco2P0C1V4 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC27.28■■□□□ 1.96
Retrieved 100 of 76,532 protein–RNA pairs in 14.6 ms