Protein–RNA interactions for Protein: A6X942

Sh2d4b, SH2 domain-containing protein 4B, mousemouse

Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh2d4bA6X942 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC25.89■■□□□ 1.73
Sh2d4bA6X942 Pitpna-205ENSMUST00000179445 1665 ntAPPRIS ALT1 TSL 5 BASIC25.89■■□□□ 1.73
Sh2d4bA6X942 Mir6538-201ENSMUST00000183713 110 ntBASIC25.86■■□□□ 1.73
Sh2d4bA6X942 Ring1-201ENSMUST00000025183 2034 ntAPPRIS P1 TSL 1 (best) BASIC25.86■■□□□ 1.73
Sh2d4bA6X942 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC25.86■■□□□ 1.73
Sh2d4bA6X942 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC25.85■■□□□ 1.73
Sh2d4bA6X942 Uncx-201ENSMUST00000172997 2498 ntAPPRIS P1 TSL 1 (best) BASIC25.84■■□□□ 1.73
Sh2d4bA6X942 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC25.84■■□□□ 1.73
Sh2d4bA6X942 Hmx1-201ENSMUST00000087674 1526 ntAPPRIS P1 TSL 1 (best) BASIC25.83■■□□□ 1.73
Sh2d4bA6X942 A530058N18Rik-203ENSMUST00000135729 1405 ntTSL 1 (best) BASIC25.83■■□□□ 1.73
Sh2d4bA6X942 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC25.82■■□□□ 1.72
Sh2d4bA6X942 Dmwd-201ENSMUST00000032570 2494 ntAPPRIS P2 TSL 1 (best) BASIC25.81■■□□□ 1.72
Sh2d4bA6X942 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC25.81■■□□□ 1.72
Sh2d4bA6X942 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC25.81■■□□□ 1.72
Sh2d4bA6X942 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC25.81■■□□□ 1.72
Sh2d4bA6X942 Triobp-206ENSMUST00000130663 1660 ntAPPRIS ALT2 TSL 5 BASIC25.8■■□□□ 1.72
Sh2d4bA6X942 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC25.8■■□□□ 1.72
Sh2d4bA6X942 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC25.8■■□□□ 1.72
Sh2d4bA6X942 Gm28052-201ENSMUST00000150388 380 ntTSL 3 BASIC25.79■■□□□ 1.72
Sh2d4bA6X942 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC25.79■■□□□ 1.72
Sh2d4bA6X942 Dazap1-203ENSMUST00000105362 2081 ntAPPRIS P3 TSL 1 (best) BASIC25.79■■□□□ 1.72
Sh2d4bA6X942 Zfp91-201ENSMUST00000038627 5531 ntAPPRIS P1 TSL 1 (best) BASIC25.78■■□□□ 1.72
Sh2d4bA6X942 Galnt10-202ENSMUST00000108846 1745 ntTSL 1 (best) BASIC25.77■■□□□ 1.72
Sh2d4bA6X942 Ebag9-203ENSMUST00000227691 1945 ntAPPRIS P1 BASIC25.76■■□□□ 1.72
Sh2d4bA6X942 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC25.75■■□□□ 1.71
Sh2d4bA6X942 Tpst1-201ENSMUST00000040721 2050 ntAPPRIS P1 TSL 1 (best) BASIC25.75■■□□□ 1.71
Sh2d4bA6X942 Upp2-202ENSMUST00000071543 2150 ntTSL 1 (best) BASIC25.74■■□□□ 1.71
Sh2d4bA6X942 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC25.74■■□□□ 1.71
Sh2d4bA6X942 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC25.74■■□□□ 1.71
Sh2d4bA6X942 Zxda-201ENSMUST00000117281 2621 ntBASIC25.73■■□□□ 1.71
Sh2d4bA6X942 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC25.73■■□□□ 1.71
Sh2d4bA6X942 Ywhaq-202ENSMUST00000103002 2110 ntAPPRIS P1 TSL 1 (best) BASIC25.73■■□□□ 1.71
Sh2d4bA6X942 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC25.72■■□□□ 1.71
Sh2d4bA6X942 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC25.72■■□□□ 1.71
Sh2d4bA6X942 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC25.71■■□□□ 1.71
Sh2d4bA6X942 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC25.71■■□□□ 1.71
Sh2d4bA6X942 Hexdc-202ENSMUST00000106117 2149 ntAPPRIS P2 TSL 1 (best) BASIC25.71■■□□□ 1.71
Sh2d4bA6X942 Traf4-201ENSMUST00000017530 2078 ntAPPRIS P1 TSL 1 (best) BASIC25.7■■□□□ 1.7
Sh2d4bA6X942 Gm30346-201ENSMUST00000218641 1699 ntBASIC25.69■■□□□ 1.7
Sh2d4bA6X942 Fgf20-201ENSMUST00000034014 1476 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.7
Sh2d4bA6X942 Gpr137c-205ENSMUST00000227009 771 ntAPPRIS ALT2 BASIC25.69■■□□□ 1.7
Sh2d4bA6X942 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC25.69■■□□□ 1.7
Sh2d4bA6X942 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC25.69■■□□□ 1.7
Sh2d4bA6X942 Gnas-207ENSMUST00000109085 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC25.69■■□□□ 1.7
Sh2d4bA6X942 Rab40c-201ENSMUST00000026826 2466 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.7
Sh2d4bA6X942 Cadm1-210ENSMUST00000214542 899 ntTSL 1 (best) BASIC25.68■■□□□ 1.7
Sh2d4bA6X942 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC25.67■■□□□ 1.7
Sh2d4bA6X942 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC25.67■■□□□ 1.7
Sh2d4bA6X942 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
Sh2d4bA6X942 Ppp1r3e-202ENSMUST00000177403 1957 ntAPPRIS P1 TSL 5 BASIC25.67■■□□□ 1.7
Sh2d4bA6X942 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
Sh2d4bA6X942 Gm9905-201ENSMUST00000065740 1845 ntBASIC25.66■■□□□ 1.7
Sh2d4bA6X942 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC25.66■■□□□ 1.7
Sh2d4bA6X942 Hoxa13-203ENSMUST00000147595 2395 ntAPPRIS P5 TSL 5 BASIC25.66■■□□□ 1.7
Sh2d4bA6X942 Pfdn2-202ENSMUST00000135941 1735 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
Sh2d4bA6X942 Ric1-206ENSMUST00000162184 2157 ntTSL 1 (best) BASIC25.65■■□□□ 1.7
Sh2d4bA6X942 Gm11175-201ENSMUST00000116172 543 ntBASIC25.65■■□□□ 1.7
Sh2d4bA6X942 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC25.64■■□□□ 1.7
Sh2d4bA6X942 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC25.64■■□□□ 1.7
Sh2d4bA6X942 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC25.64■■□□□ 1.7
Sh2d4bA6X942 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC25.64■■□□□ 1.7
Sh2d4bA6X942 Galnt12-201ENSMUST00000045041 2288 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
Sh2d4bA6X942 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC25.63■■□□□ 1.69
Sh2d4bA6X942 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC25.63■■□□□ 1.69
Sh2d4bA6X942 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC25.63■■□□□ 1.69
Sh2d4bA6X942 Mogs-201ENSMUST00000032114 2780 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
Sh2d4bA6X942 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC25.61■■□□□ 1.69
Sh2d4bA6X942 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC25.6■■□□□ 1.69
Sh2d4bA6X942 Gm6345-201ENSMUST00000180378 1691 ntBASIC25.59■■□□□ 1.69
Sh2d4bA6X942 Raly-201ENSMUST00000029120 1802 ntAPPRIS ALT2 TSL 5 BASIC25.59■■□□□ 1.69
Sh2d4bA6X942 Mxd4-202ENSMUST00000119171 1160 ntTSL 1 (best) BASIC25.58■■□□□ 1.69
Sh2d4bA6X942 Ell2-205ENSMUST00000222194 434 ntTSL 3 BASIC25.58■■□□□ 1.69
Sh2d4bA6X942 Cap2-205ENSMUST00000225824 1634 ntBASIC25.58■■□□□ 1.69
Sh2d4bA6X942 Msi2-202ENSMUST00000107908 695 ntTSL 5 BASIC25.57■■□□□ 1.68
Sh2d4bA6X942 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
Sh2d4bA6X942 Eif4e2-203ENSMUST00000113230 1569 ntTSL 1 (best) BASIC25.55■■□□□ 1.68
Sh2d4bA6X942 Tsen34-211ENSMUST00000205287 1375 ntTSL 5 BASIC25.55■■□□□ 1.68
Sh2d4bA6X942 Fam120a-201ENSMUST00000060805 5105 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
Sh2d4bA6X942 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC25.54■■□□□ 1.68
Sh2d4bA6X942 Gjc1-201ENSMUST00000068933 1903 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
Sh2d4bA6X942 P2rx2-205ENSMUST00000200037 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC25.53■■□□□ 1.68
Sh2d4bA6X942 Otulin-201ENSMUST00000059662 1491 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
Sh2d4bA6X942 Gm6206-201ENSMUST00000133472 2199 ntBASIC25.52■■□□□ 1.68
Sh2d4bA6X942 Cebpb-201ENSMUST00000070642 1504 ntAPPRIS P1 BASIC25.52■■□□□ 1.68
Sh2d4bA6X942 Nucks1-203ENSMUST00000189946 2375 ntAPPRIS ALT2 TSL 1 (best) BASIC25.51■■□□□ 1.67
Sh2d4bA6X942 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC25.51■■□□□ 1.67
Sh2d4bA6X942 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC25.51■■□□□ 1.67
Sh2d4bA6X942 Fkbp8-202ENSMUST00000119353 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC25.51■■□□□ 1.67
Sh2d4bA6X942 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC25.5■■□□□ 1.67
Sh2d4bA6X942 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC25.5■■□□□ 1.67
Sh2d4bA6X942 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC25.5■■□□□ 1.67
Sh2d4bA6X942 Runx3-202ENSMUST00000119564 1855 ntAPPRIS ALT2 TSL 1 (best) BASIC25.49■■□□□ 1.67
Sh2d4bA6X942 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC25.49■■□□□ 1.67
Sh2d4bA6X942 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
Sh2d4bA6X942 Ctbp1-201ENSMUST00000079746 2279 ntAPPRIS P3 TSL 1 (best) BASIC25.48■■□□□ 1.67
Sh2d4bA6X942 Slc30a2-203ENSMUST00000105873 1224 ntTSL 5 BASIC25.48■■□□□ 1.67
Sh2d4bA6X942 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC25.48■■□□□ 1.67
Sh2d4bA6X942 Mrps7-201ENSMUST00000058109 1962 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
Sh2d4bA6X942 Gm43445-201ENSMUST00000198564 2091 ntBASIC25.46■■□□□ 1.67
Sh2d4bA6X942 Rtn2-201ENSMUST00000032559 1990 ntAPPRIS P3 TSL 1 (best) BASIC25.46■■□□□ 1.67
Retrieved 100 of 76,532 protein–RNA pairs in 26.5 ms