Protein–RNA interactions for Protein: Q96BQ3

TRIM43, Tripartite motif-containing protein 43, humanhuman

Predicted RBP Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM43Q96BQ3 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
TRIM43Q96BQ3 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
TRIM43Q96BQ3 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC22.44■■□□□ 1.18
TRIM43Q96BQ3 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC22.44■■□□□ 1.18
TRIM43Q96BQ3 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
TRIM43Q96BQ3 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
TRIM43Q96BQ3 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC22.44■■□□□ 1.18
TRIM43Q96BQ3 NME3-204ENST00000563498 920 ntTSL 2 BASIC22.44■■□□□ 1.18
TRIM43Q96BQ3 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC22.44■■□□□ 1.18
TRIM43Q96BQ3 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC22.44■■□□□ 1.18
TRIM43Q96BQ3 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
TRIM43Q96BQ3 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
TRIM43Q96BQ3 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC22.43■■□□□ 1.18
TRIM43Q96BQ3 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
TRIM43Q96BQ3 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
TRIM43Q96BQ3 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC22.43■■□□□ 1.18
TRIM43Q96BQ3 AC079598.2-202ENST00000546624 1451 ntBASIC22.43■■□□□ 1.18
TRIM43Q96BQ3 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
TRIM43Q96BQ3 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
TRIM43Q96BQ3 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
TRIM43Q96BQ3 RBM17P1-201ENST00000453646 1190 ntBASIC22.43■■□□□ 1.18
TRIM43Q96BQ3 AC106791.1-202ENST00000508281 1148 ntTSL 2 BASIC22.43■■□□□ 1.18
TRIM43Q96BQ3 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC22.43■■□□□ 1.18
TRIM43Q96BQ3 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC22.43■■□□□ 1.18
TRIM43Q96BQ3 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC22.43■■□□□ 1.18
TRIM43Q96BQ3 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
TRIM43Q96BQ3 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC22.43■■□□□ 1.18
TRIM43Q96BQ3 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
TRIM43Q96BQ3 SRI-203ENST00000419179 1307 ntTSL 2 BASIC22.42■■□□□ 1.18
TRIM43Q96BQ3 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC22.42■■□□□ 1.18
TRIM43Q96BQ3 KRT18P57-201ENST00000443599 1254 ntBASIC22.42■■□□□ 1.18
TRIM43Q96BQ3 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
TRIM43Q96BQ3 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC22.42■■□□□ 1.18
TRIM43Q96BQ3 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC22.42■■□□□ 1.18
TRIM43Q96BQ3 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
TRIM43Q96BQ3 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
TRIM43Q96BQ3 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC22.42■■□□□ 1.18
TRIM43Q96BQ3 RHOQ-201ENST00000238738 2975 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
TRIM43Q96BQ3 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC22.41■■□□□ 1.18
TRIM43Q96BQ3 NR2F6-201ENST00000291442 2404 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
TRIM43Q96BQ3 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC22.41■■□□□ 1.18
TRIM43Q96BQ3 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC22.41■■□□□ 1.18
TRIM43Q96BQ3 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC22.41■■□□□ 1.18
TRIM43Q96BQ3 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC22.41■■□□□ 1.18
TRIM43Q96BQ3 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC22.41■■□□□ 1.18
TRIM43Q96BQ3 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC22.41■■□□□ 1.18
TRIM43Q96BQ3 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
TRIM43Q96BQ3 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
TRIM43Q96BQ3 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC22.41■■□□□ 1.18
TRIM43Q96BQ3 KRT16P5-201ENST00000455284 522 ntBASIC22.41■■□□□ 1.18
TRIM43Q96BQ3 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC22.41■■□□□ 1.18
TRIM43Q96BQ3 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
TRIM43Q96BQ3 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
TRIM43Q96BQ3 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC22.4■■□□□ 1.18
TRIM43Q96BQ3 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
TRIM43Q96BQ3 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
TRIM43Q96BQ3 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC22.4■■□□□ 1.18
TRIM43Q96BQ3 CRAT-202ENST00000393384 973 ntTSL 2 BASIC22.4■■□□□ 1.18
TRIM43Q96BQ3 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
TRIM43Q96BQ3 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC22.4■■□□□ 1.18
TRIM43Q96BQ3 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
TRIM43Q96BQ3 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC22.39■■□□□ 1.18
TRIM43Q96BQ3 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC22.39■■□□□ 1.18
TRIM43Q96BQ3 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.18
TRIM43Q96BQ3 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC22.39■■□□□ 1.18
TRIM43Q96BQ3 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC22.39■■□□□ 1.18
TRIM43Q96BQ3 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC22.39■■□□□ 1.17
TRIM43Q96BQ3 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC22.39■■□□□ 1.17
TRIM43Q96BQ3 AC113347.1-201ENST00000413321 391 ntBASIC22.39■■□□□ 1.17
TRIM43Q96BQ3 HES2-206ENST00000489730 730 ntTSL 2 BASIC22.39■■□□□ 1.17
TRIM43Q96BQ3 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC22.39■■□□□ 1.17
TRIM43Q96BQ3 AP000525.1-201ENST00000608286 694 ntBASIC22.39■■□□□ 1.17
TRIM43Q96BQ3 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC22.39■■□□□ 1.17
TRIM43Q96BQ3 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC22.39■■□□□ 1.17
TRIM43Q96BQ3 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC22.39■■□□□ 1.17
TRIM43Q96BQ3 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC22.39■■□□□ 1.17
TRIM43Q96BQ3 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC22.39■■□□□ 1.17
TRIM43Q96BQ3 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC22.38■■□□□ 1.17
TRIM43Q96BQ3 MXI1-201ENST00000239007 2424 ntAPPRIS ALT1 TSL 1 (best) BASIC22.38■■□□□ 1.17
TRIM43Q96BQ3 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC22.38■■□□□ 1.17
TRIM43Q96BQ3 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC22.38■■□□□ 1.17
TRIM43Q96BQ3 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
TRIM43Q96BQ3 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC22.38■■□□□ 1.17
TRIM43Q96BQ3 FDX2-207ENST00000494368 584 ntTSL 4 BASIC22.38■■□□□ 1.17
TRIM43Q96BQ3 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC22.38■■□□□ 1.17
TRIM43Q96BQ3 DUT-205ENST00000558813 769 ntTSL 2 BASIC22.38■■□□□ 1.17
TRIM43Q96BQ3 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC22.38■■□□□ 1.17
TRIM43Q96BQ3 DECR2-212ENST00000627716 352 ntTSL 2 BASIC22.38■■□□□ 1.17
TRIM43Q96BQ3 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
TRIM43Q96BQ3 BIN1-210ENST00000393041 2272 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
TRIM43Q96BQ3 MCUB-201ENST00000394650 2278 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
TRIM43Q96BQ3 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
TRIM43Q96BQ3 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
TRIM43Q96BQ3 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
TRIM43Q96BQ3 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC22.37■■□□□ 1.17
TRIM43Q96BQ3 PGM5P4-201ENST00000421970 445 ntBASIC22.37■■□□□ 1.17
TRIM43Q96BQ3 AL353807.1-201ENST00000427475 662 ntBASIC22.37■■□□□ 1.17
TRIM43Q96BQ3 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC22.37■■□□□ 1.17
TRIM43Q96BQ3 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC22.37■■□□□ 1.17
TRIM43Q96BQ3 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC22.37■■□□□ 1.17
Retrieved 100 of 98,524 protein–RNA pairs in 46.6 ms