Protein–RNA interactions for Protein: Q96BQ3

TRIM43, Tripartite motif-containing protein 43, humanhuman

Predicted RBP Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM43Q96BQ3 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC22.51■■□□□ 1.19
TRIM43Q96BQ3 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
TRIM43Q96BQ3 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
TRIM43Q96BQ3 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
TRIM43Q96BQ3 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC22.5■■□□□ 1.19
TRIM43Q96BQ3 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC22.5■■□□□ 1.19
TRIM43Q96BQ3 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
TRIM43Q96BQ3 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
TRIM43Q96BQ3 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC22.5■■□□□ 1.19
TRIM43Q96BQ3 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC22.5■■□□□ 1.19
TRIM43Q96BQ3 RER1-204ENST00000378518 522 ntTSL 3 BASIC22.5■■□□□ 1.19
TRIM43Q96BQ3 AC005521.1-201ENST00000393351 872 ntBASIC22.5■■□□□ 1.19
TRIM43Q96BQ3 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC22.5■■□□□ 1.19
TRIM43Q96BQ3 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC22.5■■□□□ 1.19
TRIM43Q96BQ3 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC22.5■■□□□ 1.19
TRIM43Q96BQ3 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC22.5■■□□□ 1.19
TRIM43Q96BQ3 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
TRIM43Q96BQ3 AGBL5-201ENST00000323064 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC22.49■■□□□ 1.19
TRIM43Q96BQ3 KRT8P9-201ENST00000558927 1449 ntBASIC22.49■■□□□ 1.19
TRIM43Q96BQ3 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC22.49■■□□□ 1.19
TRIM43Q96BQ3 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
TRIM43Q96BQ3 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC22.49■■□□□ 1.19
TRIM43Q96BQ3 AL390719.1-204ENST00000412397 1219 ntBASIC22.49■■□□□ 1.19
TRIM43Q96BQ3 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
TRIM43Q96BQ3 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC22.49■■□□□ 1.19
TRIM43Q96BQ3 RMI2-205ENST00000576027 818 ntTSL 2 BASIC22.49■■□□□ 1.19
TRIM43Q96BQ3 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC22.49■■□□□ 1.19
TRIM43Q96BQ3 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC22.49■■□□□ 1.19
TRIM43Q96BQ3 AC005363.2-201ENST00000618631 242 ntBASIC22.49■■□□□ 1.19
TRIM43Q96BQ3 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
TRIM43Q96BQ3 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
TRIM43Q96BQ3 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC22.49■■□□□ 1.19
TRIM43Q96BQ3 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
TRIM43Q96BQ3 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC22.49■■□□□ 1.19
TRIM43Q96BQ3 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC22.49■■□□□ 1.19
TRIM43Q96BQ3 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC22.49■■□□□ 1.19
TRIM43Q96BQ3 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
TRIM43Q96BQ3 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC22.48■■□□□ 1.19
TRIM43Q96BQ3 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
TRIM43Q96BQ3 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
TRIM43Q96BQ3 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC22.48■■□□□ 1.19
TRIM43Q96BQ3 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
TRIM43Q96BQ3 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
TRIM43Q96BQ3 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC22.48■■□□□ 1.19
TRIM43Q96BQ3 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC22.48■■□□□ 1.19
TRIM43Q96BQ3 RPS15-203ENST00000586096 570 ntTSL 2 BASIC22.48■■□□□ 1.19
TRIM43Q96BQ3 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC22.48■■□□□ 1.19
TRIM43Q96BQ3 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC22.48■■□□□ 1.19
TRIM43Q96BQ3 HTR7P1-201ENST00000538670 1336 ntBASIC22.48■■□□□ 1.19
TRIM43Q96BQ3 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
TRIM43Q96BQ3 PKM-204ENST00000449901 2526 ntTSL 2 BASIC22.48■■□□□ 1.19
TRIM43Q96BQ3 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
TRIM43Q96BQ3 BSPRY-201ENST00000374183 2339 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
TRIM43Q96BQ3 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
TRIM43Q96BQ3 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC22.47■■□□□ 1.19
TRIM43Q96BQ3 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC22.47■■□□□ 1.19
TRIM43Q96BQ3 RNF146-204ENST00000476956 884 ntTSL 2 BASIC22.47■■□□□ 1.19
TRIM43Q96BQ3 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC22.47■■□□□ 1.19
TRIM43Q96BQ3 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
TRIM43Q96BQ3 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC22.47■■□□□ 1.19
TRIM43Q96BQ3 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC22.47■■□□□ 1.19
TRIM43Q96BQ3 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC22.47■■□□□ 1.19
TRIM43Q96BQ3 ZCCHC2-201ENST00000269499 5959 ntAPPRIS P2 TSL 5 BASIC22.47■■□□□ 1.19
TRIM43Q96BQ3 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC22.47■■□□□ 1.19
TRIM43Q96BQ3 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC22.47■■□□□ 1.19
TRIM43Q96BQ3 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC22.47■■□□□ 1.19
TRIM43Q96BQ3 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC22.47■■□□□ 1.19
TRIM43Q96BQ3 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC22.46■■□□□ 1.19
TRIM43Q96BQ3 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC22.46■■□□□ 1.19
TRIM43Q96BQ3 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
TRIM43Q96BQ3 FAM197Y1-201ENST00000421178 764 ntBASIC22.46■■□□□ 1.19
TRIM43Q96BQ3 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC22.46■■□□□ 1.19
TRIM43Q96BQ3 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
TRIM43Q96BQ3 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
TRIM43Q96BQ3 AKT1-203ENST00000407796 2710 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
TRIM43Q96BQ3 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC22.46■■□□□ 1.19
TRIM43Q96BQ3 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC22.46■■□□□ 1.19
TRIM43Q96BQ3 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC22.46■■□□□ 1.19
TRIM43Q96BQ3 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC22.46■■□□□ 1.19
TRIM43Q96BQ3 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC22.45■■□□□ 1.19
TRIM43Q96BQ3 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
TRIM43Q96BQ3 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
TRIM43Q96BQ3 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC22.45■■□□□ 1.18
TRIM43Q96BQ3 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC22.45■■□□□ 1.18
TRIM43Q96BQ3 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC22.45■■□□□ 1.18
TRIM43Q96BQ3 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC22.45■■□□□ 1.18
TRIM43Q96BQ3 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC22.45■■□□□ 1.18
TRIM43Q96BQ3 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC22.45■■□□□ 1.18
TRIM43Q96BQ3 Six3os1_6.1-201ENST00000620790 196 ntBASIC22.45■■□□□ 1.18
TRIM43Q96BQ3 CAPN10-207ENST00000391984 2644 ntAPPRIS P2 TSL 1 (best) BASIC22.45■■□□□ 1.18
TRIM43Q96BQ3 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC22.45■■□□□ 1.18
TRIM43Q96BQ3 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC22.45■■□□□ 1.18
TRIM43Q96BQ3 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
TRIM43Q96BQ3 TLE6-201ENST00000246112 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC22.45■■□□□ 1.18
TRIM43Q96BQ3 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
TRIM43Q96BQ3 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
TRIM43Q96BQ3 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
TRIM43Q96BQ3 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC22.44■■□□□ 1.18
TRIM43Q96BQ3 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC22.44■■□□□ 1.18
TRIM43Q96BQ3 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
Retrieved 100 of 98,524 protein–RNA pairs in 57.1 ms