Protein–RNA interactions for Protein: P32828

SLX5, E3 ubiquitin-protein ligase complex SLX5-SLX8 subunit SLX5, yeastyeast

Known RBP Predictions only

Length 619 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SLX5P32828 tN(GUU)CtN(GUU)C 74 nt5.41□□□□□ -1.54
SLX5P32828 tN(GUU)FtN(GUU)F 74 nt5.41□□□□□ -1.54
SLX5P32828 tN(GUU)GtN(GUU)G 74 nt5.41□□□□□ -1.54
SLX5P32828 tN(GUU)KtN(GUU)K 74 nt5.41□□□□□ -1.54
SLX5P32828 tN(GUU)LtN(GUU)L 74 nt5.41□□□□□ -1.54
SLX5P32828 tN(GUU)N1tN(GUU)N1 74 nt5.41□□□□□ -1.54
SLX5P32828 tN(GUU)N2tN(GUU)N2 74 nt5.41□□□□□ -1.54
SLX5P32828 tN(GUU)O1tN(GUU)O1 74 nt5.41□□□□□ -1.54
SLX5P32828 tN(GUU)O2tN(GUU)O2 74 nt5.41□□□□□ -1.54
SLX5P32828 tN(GUU)PtN(GUU)P 74 nt5.41□□□□□ -1.54
SLX5P32828 tX(XXX)DtX(XXX)D 100 nt5.41□□□□□ -1.54
SLX5P32828 SNZ2YNL333W 897 nt5.41□□□□□ -1.54
SLX5P32828 YOL097W-AYOL097W-A 186 nt5.41□□□□□ -1.54
SLX5P32828 NCL1YBL024W 2055 nt5.4□□□□□ -1.54
SLX5P32828 YDL034WYDL034W 345 nt5.4□□□□□ -1.54
SLX5P32828 NCE101YJL205C 162 nt5.4□□□□□ -1.54
SLX5P32828 RPL22AYLR061W 366 nt5.4□□□□□ -1.54
SLX5P32828 ABF1YKL112W 2196 nt5.4□□□□□ -1.55
SLX5P32828 PIN4YBL051C 2007 nt5.4□□□□□ -1.55
SLX5P32828 ELP2YGR200C 2367 nt5.4□□□□□ -1.55
SLX5P32828 YDL242WYDL242W 354 nt5.39□□□□□ -1.55
SLX5P32828 YOR318CYOR318C 306 nt5.39□□□□□ -1.55
SLX5P32828 ZIP2YGL249W 2115 nt5.39□□□□□ -1.55
SLX5P32828 SPT21YMR179W 2277 nt5.39□□□□□ -1.55
SLX5P32828 GAC1YOR178C 2382 nt5.38□□□□□ -1.55
SLX5P32828 YEL043WYEL043W 2871 nt5.38□□□□□ -1.55
SLX5P32828 SOM1YEL059C-A 225 nt5.38□□□□□ -1.55
SLX5P32828 ECM15YBL001C 315 nt5.38□□□□□ -1.55
SLX5P32828 ABZ1YNR033W 2364 nt5.38□□□□□ -1.55
SLX5P32828 MUS81YDR386W 1899 nt5.38□□□□□ -1.55
SLX5P32828 SSY1YDR160W 2559 nt5.38□□□□□ -1.55
SLX5P32828 RET1YOR207C 3450 nt5.37□□□□□ -1.55
SLX5P32828 MET4YNL103W 2019 nt5.37□□□□□ -1.55
SLX5P32828 TSA2YDR453C 591 nt5.37□□□□□ -1.55
SLX5P32828 PRM15YMR278W 1869 nt5.37□□□□□ -1.55
SLX5P32828 FRE3YOR381W 2136 nt5.36□□□□□ -1.55
SLX5P32828 PMT4YJR143C 2289 nt5.36□□□□□ -1.55
SLX5P32828 DIS3YOL021C 3006 nt5.36□□□□□ -1.55
SLX5P32828 tR(ACG)JtR(ACG)J 73 nt5.36□□□□□ -1.55
SLX5P32828 VTH1YIL173W 4650 nt5.36□□□□□ -1.55
SLX5P32828 VTH2YJL222W 4650 nt5.36□□□□□ -1.55
SLX5P32828 MMP1YLL061W 1752 nt5.36□□□□□ -1.55
SLX5P32828 HEH2YDR458C 1992 nt5.36□□□□□ -1.55
SLX5P32828 NDC1YML031W 1968 nt5.36□□□□□ -1.55
SLX5P32828 ADE6YGR061C 4077 nt5.36□□□□□ -1.55
SLX5P32828 MEF2YJL102W 2460 nt5.35□□□□□ -1.55
SLX5P32828 TPO2YGR138C 1845 nt5.35□□□□□ -1.55
SLX5P32828 YAE1YJR067C 426 nt5.35□□□□□ -1.55
SLX5P32828 SEC39YLR440C 2130 nt5.35□□□□□ -1.55
SLX5P32828 BUL1YMR275C 2931 nt5.34□□□□□ -1.55
SLX5P32828 SIN4YNL236W 2925 nt5.34□□□□□ -1.55
SLX5P32828 REB1YBR049C 2433 nt5.34□□□□□ -1.55
SLX5P32828 DBP7YKR024C 2229 nt5.34□□□□□ -1.55
SLX5P32828 YLR154W-AYLR154W-A 186 nt5.34□□□□□ -1.55
SLX5P32828 RPS15YOL040C 429 nt5.34□□□□□ -1.55
SLX5P32828 LCB5YLR260W 2064 nt5.34□□□□□ -1.55
SLX5P32828 PRE4YFR050C 801 nt5.33□□□□□ -1.56
SLX5P32828 RPL21BYPL079W 483 nt5.33□□□□□ -1.56
SLX5P32828 YPR146CYPR146C 330 nt5.33□□□□□ -1.56
SLX5P32828 ALY1YKR021W 2748 nt5.33□□□□□ -1.56
SLX5P32828 MCM4YPR019W 2802 nt5.32□□□□□ -1.56
SLX5P32828 YDL118WYDL118W 381 nt5.32□□□□□ -1.56
SLX5P32828 snR81snR81 201 nt5.32□□□□□ -1.56
SLX5P32828 COX5BYIL111W 456 nt5.32□□□□□ -1.56
SLX5P32828 ASC1YMR116C 960 nt5.32□□□□□ -1.56
SLX5P32828 RPL20BYOR312C 519 nt5.32□□□□□ -1.56
SLX5P32828 snR191snR191 274 nt5.32□□□□□ -1.56
SLX5P32828 YBR174CYBR174C 315 nt5.32□□□□□ -1.56
SLX5P32828 TRK2YKR050W 2670 nt5.31□□□□□ -1.56
SLX5P32828 HOS4YIL112W 3252 nt5.31□□□□□ -1.56
SLX5P32828 TCP1YDR212W 1680 nt5.31□□□□□ -1.56
SLX5P32828 ARN1YHL040C 1884 nt5.31□□□□□ -1.56
SLX5P32828 snR79snR79 84 nt5.31□□□□□ -1.56
SLX5P32828 tL(UAA)QtL(UAA)Q 85 nt5.31□□□□□ -1.56
SLX5P32828 snR10snR10 245 nt5.31□□□□□ -1.56
SLX5P32828 NSP1YJL041W 2472 nt5.31□□□□□ -1.56
SLX5P32828 BCH2YKR027W 2298 nt5.29□□□□□ -1.56
SLX5P32828 YER077CYER077C 2067 nt5.29□□□□□ -1.56
SLX5P32828 YFR035CYFR035C 345 nt5.29□□□□□ -1.56
SLX5P32828 snR53snR53 91 nt5.29□□□□□ -1.56
SLX5P32828 DUR1,2YBR208C 5508 nt5.29□□□□□ -1.56
SLX5P32828 MNL1YHR204W 2391 nt5.29□□□□□ -1.56
SLX5P32828 NUP82YJL061W 2142 nt5.29□□□□□ -1.56
SLX5P32828 PHO8YDR481C 1701 nt5.28□□□□□ -1.56
SLX5P32828 AHC1YOR023C 1701 nt5.28□□□□□ -1.56
SLX5P32828 PSE1YMR308C 3270 nt5.28□□□□□ -1.56
SLX5P32828 YHR182WYHR182W 2358 nt5.28□□□□□ -1.56
SLX5P32828 YOR019WYOR019W 2193 nt5.28□□□□□ -1.56
SLX5P32828 HSC82YMR186W 2118 nt5.28□□□□□ -1.56
SLX5P32828 HOR7YMR251W-A 180 nt5.28□□□□□ -1.56
SLX5P32828 YCL046WYCL046W 324 nt5.28□□□□□ -1.56
SLX5P32828 REG1YDR028C 3045 nt5.28□□□□□ -1.56
SLX5P32828 SWC3YAL011W 1878 nt5.28□□□□□ -1.56
SLX5P32828 PDC1YLR044C 1692 nt5.28□□□□□ -1.56
SLX5P32828 SEG2YKL105C 3399 nt5.27□□□□□ -1.57
SLX5P32828 YNL144CYNL144C 2223 nt5.27□□□□□ -1.57
SLX5P32828 HAL9YOL089C 3093 nt5.27□□□□□ -1.57
SLX5P32828 SEA4YBL104C 3117 nt5.26□□□□□ -1.57
SLX5P32828 MDV1YJL112W 2145 nt5.26□□□□□ -1.57
SLX5P32828 SEC63YOR254C 1992 nt5.26□□□□□ -1.57
Retrieved 100 of 7,029 protein–RNA pairs in 8.9 ms