Protein–RNA interactions for Protein: P0CX60

TY1A-PR2, Transposon Ty1-PR2 Gag polyprotein, yeastyeast

Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
TY1A-PR2P0CX60 YPR092WYPR092W 306 nt4.37□□□□□ -1.71
TY1A-PR2P0CX60 PDR15YDR406W 4590 nt4.37□□□□□ -1.71
TY1A-PR2P0CX60 SEA4YBL104C 3117 nt4.37□□□□□ -1.71
TY1A-PR2P0CX60 YGR266WYGR266W 2106 nt4.37□□□□□ -1.71
TY1A-PR2P0CX60 PUF6YDR496C 1971 nt4.36□□□□□ -1.71
TY1A-PR2P0CX60 ROT2YBR229C 2865 nt4.36□□□□□ -1.71
TY1A-PR2P0CX60 snR79snR79 84 nt4.36□□□□□ -1.71
TY1A-PR2P0CX60 PMP2YEL017C-A 132 nt4.36□□□□□ -1.71
TY1A-PR2P0CX60 YHR071C-AYHR071C-A 321 nt4.36□□□□□ -1.71
TY1A-PR2P0CX60 YIL059CYIL059C 366 nt4.36□□□□□ -1.71
TY1A-PR2P0CX60 DLS1YJL065C 504 nt4.36□□□□□ -1.71
TY1A-PR2P0CX60 RPS17AYML024W 411 nt4.36□□□□□ -1.71
TY1A-PR2P0CX60 SGF11YPL047W 300 nt4.36□□□□□ -1.71
TY1A-PR2P0CX60 RED1YLR263W 2484 nt4.36□□□□□ -1.71
TY1A-PR2P0CX60 YAP1YML007W 1953 nt4.36□□□□□ -1.71
TY1A-PR2P0CX60 PXA1YPL147W 2613 nt4.36□□□□□ -1.71
TY1A-PR2P0CX60 YOR1YGR281W 4434 nt4.36□□□□□ -1.71
TY1A-PR2P0CX60 RAD16YBR114W 2373 nt4.35□□□□□ -1.71
TY1A-PR2P0CX60 RBK1YCR036W 1002 nt4.35□□□□□ -1.71
TY1A-PR2P0CX60 ULI1YFR026C 510 nt4.35□□□□□ -1.71
TY1A-PR2P0CX60 USE1YGL098W 738 nt4.35□□□□□ -1.71
TY1A-PR2P0CX60 YIR030W-AYIR030W-A 384 nt4.35□□□□□ -1.71
TY1A-PR2P0CX60 NUP82YJL061W 2142 nt4.35□□□□□ -1.71
TY1A-PR2P0CX60 GON7YJL184W 372 nt4.35□□□□□ -1.71
TY1A-PR2P0CX60 YPR146CYPR146C 330 nt4.35□□□□□ -1.71
TY1A-PR2P0CX60 MSH1YHR120W 2880 nt4.34□□□□□ -1.71
TY1A-PR2P0CX60 YGL074CYGL074C 327 nt4.34□□□□□ -1.71
TY1A-PR2P0CX60 YPR053CYPR053C 456 nt4.34□□□□□ -1.71
TY1A-PR2P0CX60 HOT1YMR172W 2160 nt4.34□□□□□ -1.72
TY1A-PR2P0CX60 YPK1YKL126W 2043 nt4.33□□□□□ -1.72
TY1A-PR2P0CX60 SEC9YGR009C 1956 nt4.33□□□□□ -1.72
TY1A-PR2P0CX60 RPL38YLR325C 237 nt4.33□□□□□ -1.72
TY1A-PR2P0CX60 ASC1YMR116C 960 nt4.33□□□□□ -1.72
TY1A-PR2P0CX60 SNC2YOR327C 348 nt4.33□□□□□ -1.72
TY1A-PR2P0CX60 CDC24YAL041W 2565 nt4.33□□□□□ -1.72
TY1A-PR2P0CX60 IOC3YFR013W 2364 nt4.33□□□□□ -1.72
TY1A-PR2P0CX60 ARK1YNL020C 1917 nt4.33□□□□□ -1.72
TY1A-PR2P0CX60 GEP4YHR100C 558 nt4.32□□□□□ -1.72
TY1A-PR2P0CX60 YPR195CYPR195C 330 nt4.32□□□□□ -1.72
TY1A-PR2P0CX60 TRZ1YKR079C 2517 nt4.32□□□□□ -1.72
TY1A-PR2P0CX60 GPI13YLL031C 3054 nt4.32□□□□□ -1.72
TY1A-PR2P0CX60 TCP1YDR212W 1680 nt4.32□□□□□ -1.72
TY1A-PR2P0CX60 RPL23AYBL087C 414 nt4.31□□□□□ -1.72
TY1A-PR2P0CX60 CDC27YBL084C 2277 nt4.31□□□□□ -1.72
TY1A-PR2P0CX60 NMA111YNL123W 2994 nt4.31□□□□□ -1.72
TY1A-PR2P0CX60 AIM21YIR003W 2040 nt4.31□□□□□ -1.72
TY1A-PR2P0CX60 YDL022C-AYDL022C-A 249 nt4.3□□□□□ -1.72
TY1A-PR2P0CX60 tN(GUU)CtN(GUU)C 74 nt4.3□□□□□ -1.72
TY1A-PR2P0CX60 tN(GUU)FtN(GUU)F 74 nt4.3□□□□□ -1.72
TY1A-PR2P0CX60 tN(GUU)GtN(GUU)G 74 nt4.3□□□□□ -1.72
TY1A-PR2P0CX60 tN(GUU)KtN(GUU)K 74 nt4.3□□□□□ -1.72
TY1A-PR2P0CX60 tN(GUU)LtN(GUU)L 74 nt4.3□□□□□ -1.72
TY1A-PR2P0CX60 tN(GUU)N1tN(GUU)N1 74 nt4.3□□□□□ -1.72
TY1A-PR2P0CX60 tN(GUU)N2tN(GUU)N2 74 nt4.3□□□□□ -1.72
TY1A-PR2P0CX60 tN(GUU)O1tN(GUU)O1 74 nt4.3□□□□□ -1.72
TY1A-PR2P0CX60 tN(GUU)O2tN(GUU)O2 74 nt4.3□□□□□ -1.72
TY1A-PR2P0CX60 tN(GUU)PtN(GUU)P 74 nt4.3□□□□□ -1.72
TY1A-PR2P0CX60 YIL058WYIL058W 285 nt4.3□□□□□ -1.72
TY1A-PR2P0CX60 FEX2YPL279C 1128 nt4.3□□□□□ -1.72
TY1A-PR2P0CX60 TIF4632YGL049C 2745 nt4.3□□□□□ -1.72
TY1A-PR2P0CX60 ACE2YLR131C 2313 nt4.3□□□□□ -1.72
TY1A-PR2P0CX60 GRS2YPR081C 1857 nt4.3□□□□□ -1.72
TY1A-PR2P0CX60 LEU3YLR451W 2661 nt4.29□□□□□ -1.72
TY1A-PR2P0CX60 MSR1YHR091C 1932 nt4.29□□□□□ -1.72
TY1A-PR2P0CX60 YEL045CYEL045C 426 nt4.29□□□□□ -1.72
TY1A-PR2P0CX60 GIP4YAL031C 2283 nt4.29□□□□□ -1.72
TY1A-PR2P0CX60 PEX1YKL197C 3132 nt4.28□□□□□ -1.72
TY1A-PR2P0CX60 YRM1YOR172W 2361 nt4.28□□□□□ -1.72
TY1A-PR2P0CX60 DNF2YDR093W 4839 nt4.28□□□□□ -1.72
TY1A-PR2P0CX60 snR61snR61 90 nt4.28□□□□□ -1.72
TY1A-PR2P0CX60 YKL156C-AYKL156C-A 117 nt4.28□□□□□ -1.72
TY1A-PR2P0CX60 YML007C-AYML007C-A 111 nt4.28□□□□□ -1.72
TY1A-PR2P0CX60 VTC4YJL012C 2166 nt4.28□□□□□ -1.72
TY1A-PR2P0CX60 MSC7YHR039C 1935 nt4.28□□□□□ -1.72
TY1A-PR2P0CX60 PTA1YAL043C 2358 nt4.28□□□□□ -1.72
TY1A-PR2P0CX60 YOL057WYOL057W 2136 nt4.27□□□□□ -1.73
TY1A-PR2P0CX60 YIL142C-AYIL142C-A 333 nt4.27□□□□□ -1.73
TY1A-PR2P0CX60 UPS1YLR193C 528 nt4.27□□□□□ -1.73
TY1A-PR2P0CX60 KHA1YJL094C 2622 nt4.26□□□□□ -1.73
TY1A-PR2P0CX60 TGL4YKR089C 2733 nt4.26□□□□□ -1.73
TY1A-PR2P0CX60 SSS1YDR086C 243 nt4.26□□□□□ -1.73
TY1A-PR2P0CX60 ERP6YGL002W 651 nt4.26□□□□□ -1.73
TY1A-PR2P0CX60 YNL067W-BYNL067W-B 141 nt4.26□□□□□ -1.73
TY1A-PR2P0CX60 GAL4YPL248C 2646 nt4.26□□□□□ -1.73
TY1A-PR2P0CX60 PAN1YIR006C 4443 nt4.26□□□□□ -1.73
TY1A-PR2P0CX60 GCD6YDR211W 2139 nt4.25□□□□□ -1.73
TY1A-PR2P0CX60 RPS18AYDR450W 441 nt4.25□□□□□ -1.73
TY1A-PR2P0CX60 CDH1YGL003C 1701 nt4.25□□□□□ -1.73
TY1A-PR2P0CX60 NAG1YGR031C-A 492 nt4.25□□□□□ -1.73
TY1A-PR2P0CX60 YGR269WYGR269W 327 nt4.25□□□□□ -1.73
TY1A-PR2P0CX60 CWH43YCR017C 2862 nt4.25□□□□□ -1.73
TY1A-PR2P0CX60 DSF1YEL070W 1509 nt4.25□□□□□ -1.73
TY1A-PR2P0CX60 PIG1YLR273C 1947 nt4.25□□□□□ -1.73
TY1A-PR2P0CX60 DIS3YOL021C 3006 nt4.24□□□□□ -1.73
TY1A-PR2P0CX60 RRN6YBL014C 2685 nt4.24□□□□□ -1.73
TY1A-PR2P0CX60 YDR286CYDR286C 345 nt4.24□□□□□ -1.73
TY1A-PR2P0CX60 YER121WYER121W 345 nt4.24□□□□□ -1.73
TY1A-PR2P0CX60 ECM5YMR176W 4236 nt4.24□□□□□ -1.73
TY1A-PR2P0CX60 URB2YJR041C 3525 nt4.24□□□□□ -1.73
TY1A-PR2P0CX60 APC2YLR127C 2562 nt4.24□□□□□ -1.73
Retrieved 100 of 7,029 protein–RNA pairs in 84 ms