Protein–RNA interactions for Protein: Q9HBT6

CDH20, Cadherin-20, humanhuman

Predictions only

Length 801 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH20Q9HBT6 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CDH20Q9HBT6 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CDH20Q9HBT6 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC17.95■□□□□ 0.46
CDH20Q9HBT6 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CDH20Q9HBT6 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CDH20Q9HBT6 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
CDH20Q9HBT6 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CDH20Q9HBT6 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CDH20Q9HBT6 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
CDH20Q9HBT6 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
CDH20Q9HBT6 AC007322.4-201ENST00000509611 723 ntBASIC17.95■□□□□ 0.46
CDH20Q9HBT6 AL591742.1-201ENST00000604433 565 ntBASIC17.95■□□□□ 0.46
CDH20Q9HBT6 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
CDH20Q9HBT6 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC17.95■□□□□ 0.46
CDH20Q9HBT6 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CDH20Q9HBT6 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC17.95■□□□□ 0.46
CDH20Q9HBT6 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
CDH20Q9HBT6 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC17.94■□□□□ 0.46
CDH20Q9HBT6 AF106564.1-201ENST00000607058 2553 ntBASIC17.94■□□□□ 0.46
CDH20Q9HBT6 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CDH20Q9HBT6 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CDH20Q9HBT6 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC17.94■□□□□ 0.46
CDH20Q9HBT6 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CDH20Q9HBT6 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
CDH20Q9HBT6 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
CDH20Q9HBT6 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
CDH20Q9HBT6 AC091799.1-201ENST00000422823 811 ntBASIC17.94■□□□□ 0.46
CDH20Q9HBT6 AC026185.1-201ENST00000445748 174 ntBASIC17.94■□□□□ 0.46
CDH20Q9HBT6 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
CDH20Q9HBT6 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC17.94■□□□□ 0.46
CDH20Q9HBT6 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
CDH20Q9HBT6 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC17.94■□□□□ 0.46
CDH20Q9HBT6 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC17.94■□□□□ 0.46
CDH20Q9HBT6 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC17.94■□□□□ 0.46
CDH20Q9HBT6 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CDH20Q9HBT6 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC17.94■□□□□ 0.46
CDH20Q9HBT6 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC17.94■□□□□ 0.46
CDH20Q9HBT6 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CDH20Q9HBT6 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC17.94■□□□□ 0.46
CDH20Q9HBT6 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
CDH20Q9HBT6 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
CDH20Q9HBT6 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CDH20Q9HBT6 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC17.93■□□□□ 0.46
CDH20Q9HBT6 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
CDH20Q9HBT6 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
CDH20Q9HBT6 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CDH20Q9HBT6 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CDH20Q9HBT6 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CDH20Q9HBT6 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
CDH20Q9HBT6 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC17.93■□□□□ 0.46
CDH20Q9HBT6 BET1L-204ENST00000410108 637 ntTSL 3 BASIC17.93■□□□□ 0.46
CDH20Q9HBT6 AC007322.3-201ENST00000426526 701 ntBASIC17.93■□□□□ 0.46
CDH20Q9HBT6 UQCRFS1P1-201ENST00000435169 820 ntBASIC17.93■□□□□ 0.46
CDH20Q9HBT6 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC17.93■□□□□ 0.46
CDH20Q9HBT6 MAZ-216ENST00000616501 991 ntTSL 5 BASIC17.93■□□□□ 0.46
CDH20Q9HBT6 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC17.93■□□□□ 0.46
CDH20Q9HBT6 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC17.93■□□□□ 0.46
CDH20Q9HBT6 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CDH20Q9HBT6 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CDH20Q9HBT6 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
CDH20Q9HBT6 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CDH20Q9HBT6 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CDH20Q9HBT6 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
CDH20Q9HBT6 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC17.92■□□□□ 0.46
CDH20Q9HBT6 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC17.92■□□□□ 0.46
CDH20Q9HBT6 AC116050.2-201ENST00000612102 1779 ntBASIC17.92■□□□□ 0.46
CDH20Q9HBT6 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CDH20Q9HBT6 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
CDH20Q9HBT6 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC17.92■□□□□ 0.46
CDH20Q9HBT6 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
CDH20Q9HBT6 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
CDH20Q9HBT6 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC17.92■□□□□ 0.46
CDH20Q9HBT6 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC17.92■□□□□ 0.46
CDH20Q9HBT6 CNN2P6-201ENST00000439038 900 ntBASIC17.92■□□□□ 0.46
CDH20Q9HBT6 CDCA4P2-201ENST00000441182 718 ntBASIC17.92■□□□□ 0.46
CDH20Q9HBT6 PBX1-209ENST00000485769 834 ntTSL 2 BASIC17.92■□□□□ 0.46
CDH20Q9HBT6 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC17.92■□□□□ 0.46
CDH20Q9HBT6 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
CDH20Q9HBT6 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC17.92■□□□□ 0.46
CDH20Q9HBT6 PARP1-210ENST00000629232 477 ntTSL 5 BASIC17.92■□□□□ 0.46
CDH20Q9HBT6 AC008694.1-202ENST00000636953 945 ntBASIC17.92■□□□□ 0.46
CDH20Q9HBT6 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CDH20Q9HBT6 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC17.92■□□□□ 0.46
CDH20Q9HBT6 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CDH20Q9HBT6 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC17.92■□□□□ 0.46
CDH20Q9HBT6 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CDH20Q9HBT6 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
CDH20Q9HBT6 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CDH20Q9HBT6 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
CDH20Q9HBT6 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC17.91■□□□□ 0.46
CDH20Q9HBT6 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
CDH20Q9HBT6 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
CDH20Q9HBT6 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC17.91■□□□□ 0.46
CDH20Q9HBT6 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC17.91■□□□□ 0.46
CDH20Q9HBT6 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
CDH20Q9HBT6 EXOC3-AS1-202ENST00000623673 1663 ntBASIC17.91■□□□□ 0.46
CDH20Q9HBT6 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
CDH20Q9HBT6 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC17.91■□□□□ 0.46
CDH20Q9HBT6 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
CDH20Q9HBT6 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC17.91■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 59.6 ms