Protein–RNA interactions for Protein: Q6Q5H1

TY1A-PR3, Transposon Ty1-PR3 Gag polyprotein, yeastyeast

Known RBP Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
TY1A-PR3Q6Q5H1 YBR141W-AYBR141W-A 96 nt3.7□□□□□ -1.82
TY1A-PR3Q6Q5H1 TOM70YNL121C 1854 nt3.7□□□□□ -1.82
TY1A-PR3Q6Q5H1 ATP25YMR098C 1839 nt3.7□□□□□ -1.82
TY1A-PR3Q6Q5H1 ARG2YJL071W 1725 nt3.7□□□□□ -1.82
TY1A-PR3Q6Q5H1 RPB2YOR151C 3675 nt3.69□□□□□ -1.82
TY1A-PR3Q6Q5H1 ZDS1YMR273C 2748 nt3.69□□□□□ -1.82
TY1A-PR3Q6Q5H1 RPL26AYLR344W 384 nt3.69□□□□□ -1.82
TY1A-PR3Q6Q5H1 YPR169W-AYPR169W-A 219 nt3.69□□□□□ -1.82
TY1A-PR3Q6Q5H1 YPR170W-BYPR170W-B 258 nt3.69□□□□□ -1.82
TY1A-PR3Q6Q5H1 RRN6YBL014C 2685 nt3.69□□□□□ -1.82
TY1A-PR3Q6Q5H1 CIN1YOR349W 3045 nt3.69□□□□□ -1.82
TY1A-PR3Q6Q5H1 SRP72YPL210C 1923 nt3.68□□□□□ -1.82
TY1A-PR3Q6Q5H1 YDL011CYDL011C 324 nt3.68□□□□□ -1.82
TY1A-PR3Q6Q5H1 YDR246W-AYDR246W-A 201 nt3.68□□□□□ -1.82
TY1A-PR3Q6Q5H1 MZM1YDR493W 372 nt3.68□□□□□ -1.82
TY1A-PR3Q6Q5H1 YGR174W-AYGR174W-A 87 nt3.68□□□□□ -1.82
TY1A-PR3Q6Q5H1 TIM8YJR135W-A 264 nt3.68□□□□□ -1.82
TY1A-PR3Q6Q5H1 PEX11YOL147C 711 nt3.68□□□□□ -1.82
TY1A-PR3Q6Q5H1 TMA108YIL137C 2841 nt3.68□□□□□ -1.82
TY1A-PR3Q6Q5H1 GYL1YMR192W 2163 nt3.68□□□□□ -1.82
TY1A-PR3Q6Q5H1 YHR214C-EYHR214C-E 300 nt3.67□□□□□ -1.82
TY1A-PR3Q6Q5H1 YIL066W-AYIL066W-A 444 nt3.67□□□□□ -1.82
TY1A-PR3Q6Q5H1 NKP2YLR315W 462 nt3.67□□□□□ -1.82
TY1A-PR3Q6Q5H1 YOR131CYOR131C 657 nt3.67□□□□□ -1.82
TY1A-PR3Q6Q5H1 snR49snR49 165 nt3.67□□□□□ -1.82
TY1A-PR3Q6Q5H1 YCL023CYCL023C 348 nt3.67□□□□□ -1.82
TY1A-PR3Q6Q5H1 YHR078WYHR078W 1659 nt3.67□□□□□ -1.82
TY1A-PR3Q6Q5H1 ARP7YPR034W 1434 nt3.67□□□□□ -1.82
TY1A-PR3Q6Q5H1 GSC2YGR032W 5688 nt3.67□□□□□ -1.82
TY1A-PR3Q6Q5H1 MSS11YMR164C 2277 nt3.67□□□□□ -1.82
TY1A-PR3Q6Q5H1 PAC1YOR269W 1485 nt3.67□□□□□ -1.82
TY1A-PR3Q6Q5H1 FAS2YPL231W 5664 nt3.66□□□□□ -1.82
TY1A-PR3Q6Q5H1 OSW7YFR039C 1533 nt3.66□□□□□ -1.82
TY1A-PR3Q6Q5H1 YJL016WYJL016W 1686 nt3.66□□□□□ -1.82
TY1A-PR3Q6Q5H1 GPI13YLL031C 3054 nt3.66□□□□□ -1.82
TY1A-PR3Q6Q5H1 YDR134CYDR134C 411 nt3.66□□□□□ -1.82
TY1A-PR3Q6Q5H1 DAD4YDR320C-A 219 nt3.66□□□□□ -1.82
TY1A-PR3Q6Q5H1 ATP8Q0080 147 nt3.66□□□□□ -1.82
TY1A-PR3Q6Q5H1 YAL044W-AYAL044W-A 333 nt3.66□□□□□ -1.82
TY1A-PR3Q6Q5H1 YLR466C-BYLR466C-B 117 nt3.66□□□□□ -1.82
TY1A-PR3Q6Q5H1 DAD3YBR233W-A 285 nt3.66□□□□□ -1.82
TY1A-PR3Q6Q5H1 YGL140CYGL140C 3660 nt3.66□□□□□ -1.82
TY1A-PR3Q6Q5H1 TPS2YDR074W 2691 nt3.66□□□□□ -1.82
TY1A-PR3Q6Q5H1 EMC1YCL045C 2283 nt3.65□□□□□ -1.82
TY1A-PR3Q6Q5H1 PWP2YCR057C 2772 nt3.65□□□□□ -1.82
TY1A-PR3Q6Q5H1 YGL194C-AYGL194C-A 243 nt3.65□□□□□ -1.83
TY1A-PR3Q6Q5H1 GPI14YJR013W 1212 nt3.65□□□□□ -1.83
TY1A-PR3Q6Q5H1 ABF2YMR072W 552 nt3.65□□□□□ -1.83
TY1A-PR3Q6Q5H1 GAT4YIR013C 366 nt3.64□□□□□ -1.83
TY1A-PR3Q6Q5H1 HSK3YKL138C-A 210 nt3.64□□□□□ -1.83
TY1A-PR3Q6Q5H1 YCG1YDR325W 3108 nt3.64□□□□□ -1.83
TY1A-PR3Q6Q5H1 SPT16YGL207W 3108 nt3.64□□□□□ -1.83
TY1A-PR3Q6Q5H1 SEA4YBL104C 3117 nt3.64□□□□□ -1.83
TY1A-PR3Q6Q5H1 CCM1YGR150C 2595 nt3.64□□□□□ -1.83
TY1A-PR3Q6Q5H1 STN1YDR082W 1485 nt3.64□□□□□ -1.83
TY1A-PR3Q6Q5H1 SEC15YGL233W 2733 nt3.64□□□□□ -1.83
TY1A-PR3Q6Q5H1 SGO1YOR073W 1773 nt3.63□□□□□ -1.83
TY1A-PR3Q6Q5H1 CDC45YLR103C 1953 nt3.63□□□□□ -1.83
TY1A-PR3Q6Q5H1 FLO10YKR102W 3510 nt3.63□□□□□ -1.83
TY1A-PR3Q6Q5H1 HTL1YCR020W-B 237 nt3.63□□□□□ -1.83
TY1A-PR3Q6Q5H1 APQ12YIL040W 417 nt3.63□□□□□ -1.83
TY1A-PR3Q6Q5H1 YKR033CYKR033C 426 nt3.63□□□□□ -1.83
TY1A-PR3Q6Q5H1 SDH2YLL041C 801 nt3.63□□□□□ -1.83
TY1A-PR3Q6Q5H1 ASC1YMR116C 960 nt3.63□□□□□ -1.83
TY1A-PR3Q6Q5H1 YPL182CYPL182C 384 nt3.63□□□□□ -1.83
TY1A-PR3Q6Q5H1 RPS23BYPR132W 438 nt3.63□□□□□ -1.83
TY1A-PR3Q6Q5H1 MGR1YCL044C 1254 nt3.63□□□□□ -1.83
TY1A-PR3Q6Q5H1 IOC3YFR013W 2364 nt3.63□□□□□ -1.83
TY1A-PR3Q6Q5H1 ABP140YOR239W 1887 nt3.62□□□□□ -1.83
TY1A-PR3Q6Q5H1 JHD2YJR119C 2187 nt3.62□□□□□ -1.83
TY1A-PR3Q6Q5H1 LEU3YLR451W 2661 nt3.62□□□□□ -1.83
TY1A-PR3Q6Q5H1 YCR075W-AYCR075W-A 228 nt3.62□□□□□ -1.83
TY1A-PR3Q6Q5H1 RPL35AYDL191W 363 nt3.62□□□□□ -1.83
TY1A-PR3Q6Q5H1 YGR151CYGR151C 336 nt3.62□□□□□ -1.83
TY1A-PR3Q6Q5H1 COA3YJL062W-A 258 nt3.62□□□□□ -1.83
TY1A-PR3Q6Q5H1 YOL155W-AYOL155W-A 135 nt3.62□□□□□ -1.83
TY1A-PR3Q6Q5H1 YOR050CYOR050C 348 nt3.62□□□□□ -1.83
TY1A-PR3Q6Q5H1 TOP1YOL006C 2310 nt3.62□□□□□ -1.83
TY1A-PR3Q6Q5H1 MLH2YLR035C 2088 nt3.62□□□□□ -1.83
TY1A-PR3Q6Q5H1 GPI10YGL142C 1851 nt3.62□□□□□ -1.83
TY1A-PR3Q6Q5H1 BIT61YJL058C 1632 nt3.62□□□□□ -1.83
TY1A-PR3Q6Q5H1 CDH1YGL003C 1701 nt3.61□□□□□ -1.83
TY1A-PR3Q6Q5H1 RSC1YGR056W 2787 nt3.61□□□□□ -1.83
TY1A-PR3Q6Q5H1 MCD4YKL165C 2760 nt3.61□□□□□ -1.83
TY1A-PR3Q6Q5H1 SAP4YGL229C 2457 nt3.61□□□□□ -1.83
TY1A-PR3Q6Q5H1 PFD1YJL179W 330 nt3.61□□□□□ -1.83
TY1A-PR3Q6Q5H1 TMA22YJR014W 597 nt3.61□□□□□ -1.83
TY1A-PR3Q6Q5H1 ESF2YNR054C 951 nt3.61□□□□□ -1.83
TY1A-PR3Q6Q5H1 CHS3YBR023C 3498 nt3.61□□□□□ -1.83
TY1A-PR3Q6Q5H1 SEG1YMR086W 2883 nt3.61□□□□□ -1.83
TY1A-PR3Q6Q5H1 JEN1YKL217W 1851 nt3.6□□□□□ -1.83
TY1A-PR3Q6Q5H1 MTR10YOR160W 2919 nt3.6□□□□□ -1.83
TY1A-PR3Q6Q5H1 RPL14AYKL006W 417 nt3.6□□□□□ -1.83
TY1A-PR3Q6Q5H1 RSM19YNR037C 276 nt3.6□□□□□ -1.83
TY1A-PR3Q6Q5H1 YOR072W-AYOR072W-A 249 nt3.6□□□□□ -1.83
TY1A-PR3Q6Q5H1 SIP3YNL257C 3690 nt3.6□□□□□ -1.83
TY1A-PR3Q6Q5H1 MNT3YIL014W 1893 nt3.6□□□□□ -1.83
TY1A-PR3Q6Q5H1 OSH2YDL019C 3852 nt3.6□□□□□ -1.83
TY1A-PR3Q6Q5H1 YFH1YDL120W 525 nt3.59□□□□□ -1.83
TY1A-PR3Q6Q5H1 YEL032C-AYEL032C-A 162 nt3.59□□□□□ -1.83
Retrieved 100 of 7,029 protein–RNA pairs in 18.9 ms