Protein–RNA interactions for Protein: P39986

SPF1, Manganese-transporting ATPase 1, yeastyeast

Known RBP Predictions only

Length 1,215 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SPF1P39986 YGR027W-BYGR027W-B 5268 nt3.59□□□□□ -1.84
SPF1P39986 YLR227W-BYLR227W-B 5268 nt3.59□□□□□ -1.84
SPF1P39986 YPR158C-DYPR158C-D 5268 nt3.59□□□□□ -1.84
SPF1P39986 RDS1YCR106W 2499 nt3.59□□□□□ -1.84
SPF1P39986 AAD3YCR107W 1092 nt3.58□□□□□ -1.84
SPF1P39986 YDL068WYDL068W 330 nt3.58□□□□□ -1.84
SPF1P39986 RPL27BYDR471W 411 nt3.58□□□□□ -1.84
SPF1P39986 YER188C-AYER188C-A 300 nt3.58□□□□□ -1.84
SPF1P39986 PEP8YJL053W 1140 nt3.58□□□□□ -1.84
SPF1P39986 UNG1YML021C 1080 nt3.58□□□□□ -1.84
SPF1P39986 UBC7YMR022W 498 nt3.58□□□□□ -1.84
SPF1P39986 SSN8YNL025C 972 nt3.58□□□□□ -1.84
SPF1P39986 LEU3YLR451W 2661 nt3.58□□□□□ -1.84
SPF1P39986 AYT1YLL063C 1425 nt3.58□□□□□ -1.84
SPF1P39986 BOI1YBL085W 2943 nt3.58□□□□□ -1.84
SPF1P39986 COG3YER157W 2406 nt3.58□□□□□ -1.84
SPF1P39986 RAD26YJR035W 3258 nt3.57□□□□□ -1.84
SPF1P39986 POM152YMR129W 4014 nt3.57□□□□□ -1.84
SPF1P39986 YDL071CYDL071C 375 nt3.57□□□□□ -1.84
SPF1P39986 RIX1YHR197W 2292 nt3.57□□□□□ -1.84
SPF1P39986 FAR1YJL157C 2493 nt3.57□□□□□ -1.84
SPF1P39986 PET191YJR034W 327 nt3.57□□□□□ -1.84
SPF1P39986 CDC45YLR103C 1953 nt3.57□□□□□ -1.84
SPF1P39986 YNL043CYNL043C 321 nt3.57□□□□□ -1.84
SPF1P39986 FUS1YCL027W 1539 nt3.57□□□□□ -1.84
SPF1P39986 HEF3YNL014W 3135 nt3.57□□□□□ -1.84
SPF1P39986 SSY1YDR160W 2559 nt3.57□□□□□ -1.84
SPF1P39986 TOM70YNL121C 1854 nt3.56□□□□□ -1.84
SPF1P39986 MET10YFR030W 3108 nt3.56□□□□□ -1.84
SPF1P39986 GCD10YNL062C 1437 nt3.56□□□□□ -1.84
SPF1P39986 RPS17BYDR447C 411 nt3.56□□□□□ -1.84
SPF1P39986 YMR31YFR049W 372 nt3.56□□□□□ -1.84
SPF1P39986 RPL19BYBL027W 570 nt3.56□□□□□ -1.84
SPF1P39986 YMR193C-AYMR193C-A 387 nt3.56□□□□□ -1.84
SPF1P39986 YOR146WYOR146W 306 nt3.56□□□□□ -1.84
SPF1P39986 IOC3YFR013W 2364 nt3.56□□□□□ -1.84
SPF1P39986 SEA4YBL104C 3117 nt3.56□□□□□ -1.84
SPF1P39986 ESF2YNR054C 951 nt3.55□□□□□ -1.84
SPF1P39986 SPC72YAL047C 1869 nt3.55□□□□□ -1.84
SPF1P39986 DNM1YLL001W 2274 nt3.55□□□□□ -1.84
SPF1P39986 NDD1YOR372C 1665 nt3.55□□□□□ -1.84
SPF1P39986 YNL034WYNL034W 1839 nt3.54□□□□□ -1.84
SPF1P39986 STU1YBL034C 4542 nt3.54□□□□□ -1.84
SPF1P39986 YDL242WYDL242W 354 nt3.54□□□□□ -1.84
SPF1P39986 OSH3YHR073W 2991 nt3.54□□□□□ -1.84
SPF1P39986 YHR139C-AYHR139C-A 312 nt3.54□□□□□ -1.84
SPF1P39986 YML009C-AYML009C-A 327 nt3.54□□□□□ -1.84
SPF1P39986 CGI121YML036W 546 nt3.54□□□□□ -1.84
SPF1P39986 ECM5YMR176W 4236 nt3.54□□□□□ -1.84
SPF1P39986 YDL180WYDL180W 1644 nt3.54□□□□□ -1.84
SPF1P39986 MSR1YHR091C 1932 nt3.54□□□□□ -1.84
SPF1P39986 STE23YLR389C 3084 nt3.54□□□□□ -1.84
SPF1P39986 SPT10YJL127C 1923 nt3.53□□□□□ -1.84
SPF1P39986 SUP56tL(CAA)A 82 nt3.53□□□□□ -1.84
SPF1P39986 SUP53tL(CAA)C 82 nt3.53□□□□□ -1.84
SPF1P39986 tL(CAA)DtL(CAA)D 82 nt3.53□□□□□ -1.84
SPF1P39986 tL(CAA)G1tL(CAA)G1 82 nt3.53□□□□□ -1.84
SPF1P39986 SUP54tL(CAA)G2 82 nt3.53□□□□□ -1.84
SPF1P39986 tL(CAA)G3tL(CAA)G3 82 nt3.53□□□□□ -1.84
SPF1P39986 tL(CAA)KtL(CAA)K 82 nt3.53□□□□□ -1.84
SPF1P39986 tL(CAA)LtL(CAA)L 82 nt3.53□□□□□ -1.84
SPF1P39986 tL(CAA)MtL(CAA)M 82 nt3.53□□□□□ -1.84
SPF1P39986 tL(CAA)NtL(CAA)N 82 nt3.53□□□□□ -1.84
SPF1P39986 AIM32YML050W 936 nt3.53□□□□□ -1.84
SPF1P39986 SWM2YNR004W 441 nt3.53□□□□□ -1.84
SPF1P39986 NSP1YJL041W 2472 nt3.52□□□□□ -1.85
SPF1P39986 SNX41YDR425W 1878 nt3.52□□□□□ -1.85
SPF1P39986 GPI8YDR331W 1236 nt3.52□□□□□ -1.85
SPF1P39986 HPA3YEL066W 540 nt3.52□□□□□ -1.85
SPF1P39986 YIL058WYIL058W 285 nt3.52□□□□□ -1.85
SPF1P39986 YJR098CYJR098C 1971 nt3.52□□□□□ -1.85
SPF1P39986 AI2Q0055 2565 nt3.52□□□□□ -1.85
SPF1P39986 SPB1YCL054W 2526 nt3.51□□□□□ -1.85
SPF1P39986 APE2YKL157W 2859 nt3.51□□□□□ -1.85
SPF1P39986 KAP95YLR347C 2586 nt3.51□□□□□ -1.85
SPF1P39986 FYV4YHR059W 393 nt3.51□□□□□ -1.85
SPF1P39986 tT(UGU)Q1tT(UGU)Q1 76 nt3.51□□□□□ -1.85
SPF1P39986 TIM8YJR135W-A 264 nt3.51□□□□□ -1.85
SPF1P39986 YPR016W-AYPR016W-A 261 nt3.51□□□□□ -1.85
SPF1P39986 ATG26YLR189C 3597 nt3.51□□□□□ -1.85
SPF1P39986 ENA5YDR038C 3276 nt3.51□□□□□ -1.85
SPF1P39986 ENA2YDR039C 3276 nt3.51□□□□□ -1.85
SPF1P39986 ENA1YDR040C 3276 nt3.51□□□□□ -1.85
SPF1P39986 RLF2YPR018W 1821 nt3.51□□□□□ -1.85
SPF1P39986 VPS53YJL029C 2469 nt3.5□□□□□ -1.85
SPF1P39986 TAF1YGR274C 3201 nt3.5□□□□□ -1.85
SPF1P39986 CDC50YCR094W 1176 nt3.5□□□□□ -1.85
SPF1P39986 YER181CYER181C 324 nt3.5□□□□□ -1.85
SPF1P39986 YHR052W-AYHR052W-A 195 nt3.5□□□□□ -1.85
SPF1P39986 YHR054W-AYHR054W-A 195 nt3.5□□□□□ -1.85
SPF1P39986 TMA19YKL056C 504 nt3.5□□□□□ -1.85
SPF1P39986 TIR2YOR010C 756 nt3.5□□□□□ -1.85
SPF1P39986 YPL225WYPL225W 441 nt3.5□□□□□ -1.85
SPF1P39986 URA2YJL130C 6645 nt3.5□□□□□ -1.85
SPF1P39986 ARO1YDR127W 4767 nt3.5□□□□□ -1.85
SPF1P39986 SSM4YIL030C 3960 nt3.49□□□□□ -1.85
SPF1P39986 ATG21YPL100W 1491 nt3.49□□□□□ -1.85
SPF1P39986 YDR250CYDR250C 276 nt3.49□□□□□ -1.85
SPF1P39986 YDR464C-AYDR464C-A 189 nt3.49□□□□□ -1.85
SPF1P39986 CAJ1YER048C 1176 nt3.49□□□□□ -1.85
Retrieved 100 of 7,029 protein–RNA pairs in 17.1 ms