Protein–RNA interactions for Protein: P08123

COL1A2, Collagen alpha-2(I) chain, humanhuman

Predictions only

Length 1,366 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A2P08123 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
COL1A2P08123 ZSWIM6-201ENST00000252744 5501 ntAPPRIS P1 TSL 5 BASIC22.67■■□□□ 1.22
COL1A2P08123 FBXW4P1-201ENST00000426721 2239 ntBASIC22.67■■□□□ 1.22
COL1A2P08123 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC22.67■■□□□ 1.22
COL1A2P08123 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
COL1A2P08123 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
COL1A2P08123 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC22.67■■□□□ 1.22
COL1A2P08123 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
COL1A2P08123 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC22.67■■□□□ 1.22
COL1A2P08123 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC22.67■■□□□ 1.22
COL1A2P08123 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
COL1A2P08123 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
COL1A2P08123 EP400NL-214ENST00000641289 2402 ntBASIC22.67■■□□□ 1.22
COL1A2P08123 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
COL1A2P08123 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
COL1A2P08123 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC22.67■■□□□ 1.22
COL1A2P08123 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
COL1A2P08123 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC22.67■■□□□ 1.22
COL1A2P08123 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC22.67■■□□□ 1.22
COL1A2P08123 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
COL1A2P08123 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
COL1A2P08123 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
COL1A2P08123 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
COL1A2P08123 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
COL1A2P08123 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC22.66■■□□□ 1.22
COL1A2P08123 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
COL1A2P08123 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
COL1A2P08123 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC22.66■■□□□ 1.22
COL1A2P08123 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
COL1A2P08123 SLC29A4P2-201ENST00000504749 1089 ntBASIC22.66■■□□□ 1.22
COL1A2P08123 UNC93B4-201ENST00000505679 747 ntBASIC22.66■■□□□ 1.22
COL1A2P08123 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC22.66■■□□□ 1.22
COL1A2P08123 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
COL1A2P08123 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC22.66■■□□□ 1.22
COL1A2P08123 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC22.66■■□□□ 1.22
COL1A2P08123 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC22.66■■□□□ 1.22
COL1A2P08123 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
COL1A2P08123 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC22.66■■□□□ 1.22
COL1A2P08123 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC22.66■■□□□ 1.22
COL1A2P08123 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC22.66■■□□□ 1.22
COL1A2P08123 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
COL1A2P08123 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC22.66■■□□□ 1.22
COL1A2P08123 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
COL1A2P08123 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
COL1A2P08123 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC22.65■■□□□ 1.22
COL1A2P08123 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC22.65■■□□□ 1.22
COL1A2P08123 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC22.65■■□□□ 1.22
COL1A2P08123 OR2A1-AS1-207ENST00000486094 819 ntBASIC22.65■■□□□ 1.22
COL1A2P08123 BRWD1-AS2-201ENST00000603064 1028 ntBASIC22.65■■□□□ 1.22
COL1A2P08123 MMD2-204ENST00000612910 778 ntTSL 5 BASIC22.65■■□□□ 1.22
COL1A2P08123 AC073648.6-201ENST00000641589 218 ntBASIC22.65■■□□□ 1.22
COL1A2P08123 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
COL1A2P08123 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
COL1A2P08123 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC22.65■■□□□ 1.22
COL1A2P08123 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC22.65■■□□□ 1.22
COL1A2P08123 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
COL1A2P08123 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.22
COL1A2P08123 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.22
COL1A2P08123 GCSHP5-201ENST00000443090 522 ntBASIC22.64■■□□□ 1.22
COL1A2P08123 REXO2-208ENST00000539754 791 ntTSL 2 BASIC22.64■■□□□ 1.22
COL1A2P08123 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC22.64■■□□□ 1.22
COL1A2P08123 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC22.64■■□□□ 1.22
COL1A2P08123 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC22.64■■□□□ 1.22
COL1A2P08123 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC22.64■■□□□ 1.22
COL1A2P08123 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.22
COL1A2P08123 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC22.64■■□□□ 1.22
COL1A2P08123 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC22.64■■□□□ 1.22
COL1A2P08123 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC22.64■■□□□ 1.21
COL1A2P08123 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC22.64■■□□□ 1.21
COL1A2P08123 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC22.64■■□□□ 1.21
COL1A2P08123 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC22.64■■□□□ 1.21
COL1A2P08123 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
COL1A2P08123 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC22.63■■□□□ 1.21
COL1A2P08123 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
COL1A2P08123 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
COL1A2P08123 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
COL1A2P08123 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
COL1A2P08123 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
COL1A2P08123 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC22.63■■□□□ 1.21
COL1A2P08123 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC22.63■■□□□ 1.21
COL1A2P08123 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC22.63■■□□□ 1.21
COL1A2P08123 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC22.63■■□□□ 1.21
COL1A2P08123 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
COL1A2P08123 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC22.63■■□□□ 1.21
COL1A2P08123 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
COL1A2P08123 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
COL1A2P08123 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC22.63■■□□□ 1.21
COL1A2P08123 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC22.63■■□□□ 1.21
COL1A2P08123 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC22.63■■□□□ 1.21
COL1A2P08123 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC22.63■■□□□ 1.21
COL1A2P08123 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
COL1A2P08123 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
COL1A2P08123 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC22.63■■□□□ 1.21
COL1A2P08123 SOX15-203ENST00000570788 1093 ntBASIC22.63■■□□□ 1.21
COL1A2P08123 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC22.63■■□□□ 1.21
COL1A2P08123 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC22.63■■□□□ 1.21
COL1A2P08123 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC22.63■■□□□ 1.21
COL1A2P08123 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
COL1A2P08123 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
COL1A2P08123 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
Retrieved 100 of 98,524 protein–RNA pairs in 31.7 ms