Protein–RNA interactions for Protein: P47098

TY1B-JR1, Transposon Ty1-JR1 Gag-Pol polyprotein, yeastyeast

Predictions only

Length 1,755 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
TY1B-JR1P47098 CDC37YDR168W 1521 nt1.27□□□□□ -2.21
TY1B-JR1P47098 YCL076WYCL076W 744 nt1.27□□□□□ -2.21
TY1B-JR1P47098 TGL2YDR058C 981 nt1.27□□□□□ -2.21
TY1B-JR1P47098 NCE101YJL205C 162 nt1.27□□□□□ -2.21
TY1B-JR1P47098 CMR3YPR013C 954 nt1.27□□□□□ -2.21
TY1B-JR1P47098 YBR292CYBR292C 372 nt1.27□□□□□ -2.21
TY1B-JR1P47098 YER087C-AYER087C-A 552 nt1.26□□□□□ -2.21
TY1B-JR1P47098 PAU8YAL068C 363 nt1.26□□□□□ -2.21
TY1B-JR1P47098 PAU20YOL161C 363 nt1.26□□□□□ -2.21
TY1B-JR1P47098 PNT1YOR266W 1272 nt1.26□□□□□ -2.21
TY1B-JR1P47098 BUL2YML111W 2763 nt1.26□□□□□ -2.21
TY1B-JR1P47098 RPC11YDR045C 333 nt1.25□□□□□ -2.21
TY1B-JR1P47098 LSM2YBL026W 288 nt1.25□□□□□ -2.21
TY1B-JR1P47098 SFG1YOR315W 1041 nt1.25□□□□□ -2.21
TY1B-JR1P47098 BRO1YPL084W 2535 nt1.25□□□□□ -2.21
TY1B-JR1P47098 FIG2YCR089W 4830 nt1.25□□□□□ -2.21
TY1B-JR1P47098 YDR521WYDR521W 336 nt1.24□□□□□ -2.21
TY1B-JR1P47098 YGL165CYGL165C 579 nt1.24□□□□□ -2.21
TY1B-JR1P47098 VMA6YLR447C 1038 nt1.24□□□□□ -2.21
TY1B-JR1P47098 UBC7YMR022W 498 nt1.24□□□□□ -2.21
TY1B-JR1P47098 RPL11BYGR085C 525 nt1.24□□□□□ -2.21
TY1B-JR1P47098 YKL162CYKL162C 1209 nt1.24□□□□□ -2.21
TY1B-JR1P47098 TPP1YMR156C 717 nt1.24□□□□□ -2.21
TY1B-JR1P47098 RPL11AYPR102C 525 nt1.24□□□□□ -2.21
TY1B-JR1P47098 ITT1YML068W 1395 nt1.23□□□□□ -2.21
TY1B-JR1P47098 YDL183CYDL183C 963 nt1.23□□□□□ -2.21
TY1B-JR1P47098 DPP1YDR284C 870 nt1.23□□□□□ -2.21
TY1B-JR1P47098 GRX2YDR513W 432 nt1.23□□□□□ -2.21
TY1B-JR1P47098 YML084WYML084W 309 nt1.23□□□□□ -2.21
TY1B-JR1P47098 ECM18YDR125C 1362 nt1.23□□□□□ -2.21
TY1B-JR1P47098 SEC21YNL287W 2808 nt1.23□□□□□ -2.21
TY1B-JR1P47098 KDX1YKL161C 1302 nt1.22□□□□□ -2.21
TY1B-JR1P47098 tT(AGU)BtT(AGU)B 73 nt1.22□□□□□ -2.21
TY1B-JR1P47098 tT(AGU)CtT(AGU)C 73 nt1.22□□□□□ -2.21
TY1B-JR1P47098 tT(AGU)DtT(AGU)D 73 nt1.22□□□□□ -2.21
TY1B-JR1P47098 tT(AGU)HtT(AGU)H 73 nt1.22□□□□□ -2.21
TY1B-JR1P47098 tT(AGU)I1tT(AGU)I1 73 nt1.22□□□□□ -2.21
TY1B-JR1P47098 tT(AGU)I2tT(AGU)I2 73 nt1.22□□□□□ -2.21
TY1B-JR1P47098 tT(AGU)JtT(AGU)J 73 nt1.22□□□□□ -2.21
TY1B-JR1P47098 tT(AGU)N1tT(AGU)N1 73 nt1.22□□□□□ -2.21
TY1B-JR1P47098 tT(AGU)N2tT(AGU)N2 73 nt1.22□□□□□ -2.21
TY1B-JR1P47098 tT(AGU)O1tT(AGU)O1 73 nt1.22□□□□□ -2.21
TY1B-JR1P47098 tT(AGU)O2tT(AGU)O2 73 nt1.22□□□□□ -2.21
TY1B-JR1P47098 YOR218CYOR218C 420 nt1.22□□□□□ -2.21
TY1B-JR1P47098 RUD3YOR216C 1455 nt1.22□□□□□ -2.21
TY1B-JR1P47098 RSM22YKL155C 1887 nt1.22□□□□□ -2.21
TY1B-JR1P47098 VAM6YDL077C 3150 nt1.21□□□□□ -2.22
TY1B-JR1P47098 MRPL49YJL096W 486 nt1.21□□□□□ -2.22
TY1B-JR1P47098 UPS2YLR168C 693 nt1.21□□□□□ -2.22
TY1B-JR1P47098 CMC4YMR194C-B 222 nt1.21□□□□□ -2.22
TY1B-JR1P47098 THO2YNL139C 4794 nt1.2□□□□□ -2.22
TY1B-JR1P47098 DBF20YPR111W 1695 nt1.2□□□□□ -2.22
TY1B-JR1P47098 21S_rRNA21S_rRNA 3296 nt1.2□□□□□ -2.22
TY1B-JR1P47098 YGR050CYGR050C 357 nt1.2□□□□□ -2.22
TY1B-JR1P47098 YIL059CYIL059C 366 nt1.2□□□□□ -2.22
TY1B-JR1P47098 YMR230W-AYMR230W-A 189 nt1.2□□□□□ -2.22
TY1B-JR1P47098 BRE5YNR051C 1548 nt1.2□□□□□ -2.22
TY1B-JR1P47098 PAU3YCR104W 375 nt1.19□□□□□ -2.22
TY1B-JR1P47098 YAL034C-BYAL034C-B 354 nt1.19□□□□□ -2.22
TY1B-JR1P47098 YNL043CYNL043C 321 nt1.19□□□□□ -2.22
TY1B-JR1P47098 SPO24YPR036W-A 204 nt1.19□□□□□ -2.22
TY1B-JR1P47098 GYL1YMR192W 2163 nt1.18□□□□□ -2.22
TY1B-JR1P47098 IRA2YOL081W 9240 nt1.18□□□□□ -2.22
TY1B-JR1P47098 AIM11YER093C-A 414 nt1.18□□□□□ -2.22
TY1B-JR1P47098 PEP8YJL053W 1140 nt1.18□□□□□ -2.22
TY1B-JR1P47098 YNL114CYNL114C 372 nt1.18□□□□□ -2.22
TY1B-JR1P47098 THI80YOR143C 960 nt1.18□□□□□ -2.22
TY1B-JR1P47098 ARI1YGL157W 1044 nt1.17□□□□□ -2.22
TY1B-JR1P47098 PLM2YDR501W 1566 nt1.17□□□□□ -2.22
TY1B-JR1P47098 OST2YOR103C 393 nt1.16□□□□□ -2.22
TY1B-JR1P47098 GAL7YBR018C 1101 nt1.16□□□□□ -2.22
TY1B-JR1P47098 HMS1YOR032C 1305 nt1.16□□□□□ -2.22
TY1B-JR1P47098 SMT3YDR510W 306 nt1.16□□□□□ -2.22
TY1B-JR1P47098 TRS65YGR166W 1683 nt1.15□□□□□ -2.22
TY1B-JR1P47098 SNF5YBR289W 2718 nt1.15□□□□□ -2.23
TY1B-JR1P47098 YKL145W-AYKL145W-A 93 nt1.15□□□□□ -2.23
TY1B-JR1P47098 IAH1YOR126C 717 nt1.15□□□□□ -2.23
TY1B-JR1P47098 VID24YBR105C 1089 nt1.15□□□□□ -2.23
TY1B-JR1P47098 EAF1YDR359C 2949 nt1.15□□□□□ -2.23
TY1B-JR1P47098 MAD3YJL013C 1548 nt1.15□□□□□ -2.23
TY1B-JR1P47098 CBF2YGR140W 2871 nt1.14□□□□□ -2.23
TY1B-JR1P47098 BUD30YDL151C 582 nt1.14□□□□□ -2.23
TY1B-JR1P47098 BAT1YHR208W 1182 nt1.14□□□□□ -2.23
TY1B-JR1P47098 RRT7YLL030C 342 nt1.14□□□□□ -2.23
TY1B-JR1P47098 PML1YLR016C 615 nt1.14□□□□□ -2.23
TY1B-JR1P47098 VPS9YML097C 1356 nt1.14□□□□□ -2.23
TY1B-JR1P47098 RAD9YDR217C 3930 nt1.14□□□□□ -2.23
TY1B-JR1P47098 YHR145CYHR145C 357 nt1.13□□□□□ -2.23
TY1B-JR1P47098 YLR124WYLR124W 345 nt1.13□□□□□ -2.23
TY1B-JR1P47098 SNO1YMR095C 675 nt1.13□□□□□ -2.23
TY1B-JR1P47098 YNL234WYNL234W 1281 nt1.13□□□□□ -2.23
TY1B-JR1P47098 YBL083CYBL083C 426 nt1.13□□□□□ -2.23
TY1B-JR1P47098 YOR093CYOR093C 4947 nt1.13□□□□□ -2.23
TY1B-JR1P47098 SPB4YFL002C 1821 nt1.13□□□□□ -2.23
TY1B-JR1P47098 MSS11YMR164C 2277 nt1.13□□□□□ -2.23
TY1B-JR1P47098 IRC3YDR332W 2070 nt1.13□□□□□ -2.23
TY1B-JR1P47098 ASG1YIL130W 2895 nt1.12□□□□□ -2.23
TY1B-JR1P47098 SSP1YHR184W 1716 nt1.11□□□□□ -2.23
TY1B-JR1P47098 YDR340WYDR340W 303 nt1.11□□□□□ -2.23
TY1B-JR1P47098 RPS26BYER131W 360 nt1.11□□□□□ -2.23
Retrieved 100 of 7,029 protein–RNA pairs in 48.5 ms